mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 27 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4522063 | 84 (1.070) | 4 (0.060) | 4/230 | NT | 4.9% | intergenic (‑43/+64) | yjhF/yjhG | putative transporter/putative dehydratase |
| ? | NC_000913 | = 4522085 | 80 (1.110) | intergenic (‑65/+42) | yjhF/yjhG | putative transporter/putative dehydratase | |||||
| * | ? | NC_000913 | 4389174 = | 148 (1.880) | 4 (0.050) | 4/238 | NT | 2.8% | coding (197/3324 nt) | mscM | mechanosensitive channel protein, miniconductance |
| ? | NC_000913 | 4389211 = | 137 (1.840) | coding (160/3324 nt) | mscM | mechanosensitive channel protein, miniconductance | |||||
| * | ? | NC_000913 | 4362554 = | 153 (1.940) | 3 (0.040) | 3/236 | NT | 2.0% | noncoding (73/76 nt) | pheU | tRNA‑Phe |
| ? | NC_000913 | 4362628 = | 151 (2.050) | intergenic (‑2/+105) | pheU/yjdC | tRNA‑Phe/putative transcriptional regulator | |||||
| * | ? | NC_000913 | 4356370 = | 172 (2.180) | 4 (0.050) | 4/250 | NT | 2.3% | coding (42/1458 nt) | dtpC | dipeptide and tripeptide permease |
| ? | NC_000913 | 4356389 = | 174 (2.230) | coding (23/1458 nt) | dtpC | dipeptide and tripeptide permease | |||||
| * | ? | NC_000913 | = 4306837 | 150 (1.900) | 5 (0.070) | 4/230 | NT | 3.4% | intergenic (‑240/+33) | yjcS/alsK | metallo‑beta‑lactamase superfamily protein/D‑allose kinase |
| ? | NC_000913 | = 4306852 | 144 (2.000) | intergenic (‑255/+18) | yjcS/alsK | metallo‑beta‑lactamase superfamily protein/D‑allose kinase | |||||
| * | ? | NC_000913 | = 4260142 | 173 (2.200) | 4 (0.050) | 4/240 | NT | 2.3% | intergenic (‑139/‑179) | zur/yjbL | transcriptional repressor, Zn(II)‑binding/uncharacterized protein |
| ? | NC_000913 | = 4260147 | 179 (2.390) | intergenic (‑144/‑174) | zur/yjbL | transcriptional repressor, Zn(II)‑binding/uncharacterized protein | |||||
| * | ? | NC_000913 | 4189595 = | 87 (1.100) | 4 (0.060) | 4/232 | NT | 4.7% | intergenic (+22/‑191) | rpoC/yjaZ | RNA polymerase, beta prime subunit/stationary phase growth adaptation protein |
| ? | NC_000913 | 4189619 = | 83 (1.140) | intergenic (+46/‑167) | rpoC/yjaZ | RNA polymerase, beta prime subunit/stationary phase growth adaptation protein | |||||
| * | ? | NC_000913 | 4009852 = | 117 (1.480) | 3 (0.040) | 3/240 | NT | 2.8% | coding (683/1023 nt) | pldB | lysophospholipase L2 |
| ? | NC_000913 | 4009892 = | 97 (1.290) | coding (723/1023 nt) | pldB | lysophospholipase L2 | |||||
| * | ? | NC_000913 | = 4008241 | 181 (2.300) | 3 (0.040) | 3/240 | NT | 1.7% | coding (485/621 nt) | rhtC | threonine efflux pump |
| ? | NC_000913 | = 4008257 | 183 (2.440) | coding (501/621 nt) | rhtC | threonine efflux pump | |||||
| * | ? | NC_000913 | 3978337 = | 140 (1.780) | 5 (0.070) | 5/236 | NT | 3.9% | coding (813/1080 nt) | wecF | TDP‑Fuc4NAc:lipidIIFuc4NAc transferase |
| ? | NC_000913 | 3978387 = | 118 (1.600) | coding (863/1080 nt) | wecF | TDP‑Fuc4NAc:lipidIIFuc4NAc transferase | |||||