New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4362554 =153 (1.940)3 (0.040) 3/236 NT 2.0% noncoding (73/76 nt) pheU tRNA‑Phe
?NC_000913 4362628 = 151 (2.050)intergenic (‑2/+105) pheU/yjdC tRNA‑Phe/putative transcriptional regulator
Rejected: Frequency below/above cutoff threshold.

Only 100 of 177 total aligned reads displayed.

CCGAATTGGGATATGCCCGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGA  >  NC_000913/4362407‑4362700
                                                                                                                                                   |                                                                                                                                                  
ctgcgcttcgcccgctgccgccagggtggtgcattgacctgacagaaacacagaaaagaagcgatttgccgcaatcttaagcagttgaatcgcttttactgaaattaggttgacgagatgtgcagattacggtttaatgcgccccgtTg                                                                                                                                                   <  5:49337‑M1/2‑1 (MQ=255)
ccGAATTGGGATATGCCCGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGATCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTg                                                                                                                                                   <  5:105671/149‑1 (MQ=255)
 tgcgcttcgcccgctgccgccagggtggtgcattgacctgacagaaacacagaaaagaagcgatttgccgcaatcttaagcagttgaatcgcttttactgaaattaggttgacgagatgtgcagattacggtttaatgcgccccgtTGc                                                                                                                                                  <  7:77391‑M1/3‑1 (MQ=255)
 tgcgcttcgcccgctgccgccagggtggtgcattgacctgacagaaacacagaaaagaagcgatttgccgcaatcttaagcagttgaatcgcttttactgaaattaggttgacgagatgtgcagattacggtttaatgcgccccgtTGc                                                                                                                                                  <  7:100869‑M1/3‑1 (MQ=255)
      ttcgcccgctgccgccagggtggtgcattgacctgacagaaacacagaaaagaagcgatttgccgcaatcttaagcagttgaatcgcttttactgaaattaggttgacgagatgtgcagattacggtttaatgcgccccgtTGCCCGGa                                                                                                                                             <  3:69680‑M1/8‑1 (MQ=255)
       gggATATGCCCGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGAc                                                                                                                                            >  2:367791/1‑149 (MQ=255)
         gATATGCCCGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTc                                                                                                                                          <  8:370091/149‑1 (MQ=255)
               cccGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATc                                                                                                                                    <  5:86765/149‑1 (MQ=255)
                ccGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGc                                                                                                                                                  >  4:82190/1‑134 (MQ=255)
                ccGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGc                                                                                                                                                  <  3:82190/134‑1 (MQ=255)
                ccGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATc                                                                                                                                    >  1:335355/1‑148 (MQ=255)
                ccGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATc                                                                                                                                    >  8:287256/1‑148 (MQ=255)
                ccGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATc                                                                                                                                    >  7:369365/1‑148 (MQ=255)
                  gCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGaa                                                                                                                                 <  1:149822/149‑1 (MQ=255)
                    aaaTTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAAc                                                                                                                                >  8:208995/1‑148 (MQ=255)
                      aTTGCTGTTGATGTGGGTAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACTCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCTTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCaa                                                                                                                             <  6:100112/149‑1 (MQ=255)
                          tggtgcattgacctgacagaaacacagaaaagaagcgatttgccgcaatcttaagcagttgaatcgcttttactgaaattaggttgacgagatgtgcagattacggtttaatgcgccccgtTGccc                                                                                                                                                <  3:23958‑M1/5‑1 (MQ=255)
                          cTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGa                                                                                                                          <  7:208995/148‑1 (MQ=255)
                           tGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGaca                                                                                                                        >  6:257426/1‑149 (MQ=255)
                             gTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACg                                                                                                                      >  6:274602/1‑149 (MQ=255)
                              tGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACgg                                                                                                                     <  2:70612/149‑1 (MQ=255)
                              gcattgacctgacagaaacacagaaaagaagcgatttgccgcaatcttaagcagttgaatcgcttttactgaaattaggttgacgagatgtgcagattacggtttaatgcgccccgtTGccc                                                                                                                                                >  4:213541‑M1/118‑122 (MQ=255)
                              gcattgacctgacagaaacacagaaaagaagcgatttgccgcaatcttaagcagttgaatcgcttttactgaaattaggttgacgagatgtgcagattacggtttaatgcgccccgtTGccc                                                                                                                                                <  3:213541‑M1/5‑1 (MQ=255)
                               gATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACggg                                                                                                                    >  4:190889/1‑149 (MQ=255)
                                  gtgGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGAt                                                                                                                 >  5:206839/1‑149 (MQ=255)
                                     gggAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAACCGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGAttt                                                                                                               <  7:239964/148‑1 (MQ=255)
                                            tCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGa                                                                                                                          <  7:190028/130‑1 (MQ=255)
                                                gTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATccc                                                                                                       <  6:206452/145‑1 (MQ=255)
                                                   agaaaagaagcgatttgccgcaatcttaagcagttgaatcgcttttactgaaattaggttgacgagatgtgcagattacggtttaatgcgccccgtTGcc                                                                                                                                                 <  7:361486‑M1/4‑1 (MQ=255)
                                                   agaaaagaagcgatttgccgcaatcttaagcagttgaatcgcttttactgaaattaggttgacgagatgtgcagattacggtttaatgcgccccgtTGcc                                                                                                                                                 >  8:361486‑M1/97‑100 (MQ=255)
                                                     gTTCGGTAGAATTGATGTGGAGGCAGAACGCTTAAATCGTGGCATCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTAc                                                                                              >  6:138277/1‑149 (MQ=255)
                                                      ttCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTAcc                                                                                             >  4:43100/1‑149 (MQ=255)
                                                          gTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACt                                                                                         >  3:294255/1‑149 (MQ=255)
                                                             gAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGa                                                                                       <  7:278005/148‑1 (MQ=255)
                                                             gAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGa                                                                                       <  1:367791/148‑1 (MQ=255)
                                                             gAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAg                                                                                      <  5:140007/149‑1 (MQ=255)
                                                                    tttGGAGGCAGACCGCTTAAATCGTGGCCTCCTGAAACGAAAAACGGACCTCCGTGGAGCTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGAGTTTCAATCCCCTGCTCTACCGACTGAGCTCTCCg                                                                               >  2:200263/1‑149 (MQ=25)
                                                                    tttGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATccc                                                                                                       <  2:274911/125‑1 (MQ=255)
                                                                       ggAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCggg                                                                             <  3:190889/148‑1 (MQ=255)
                                                                          ggCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAAc                                                                         >  6:157569/1‑149 (MQ=255)
                                                                            cAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACgg                                                                       <  5:25328/149‑1 (MQ=255)
                                                                             aGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTc                                                                                                             >  8:300135/1‑110 (MQ=255)
                                                                             aGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTc                                                                                                             <  7:300135/110‑1 (MQ=255)
                                                                             aGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACggg                                                                      >  5:62364/1‑149 (MQ=255)
                                                                             aGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACggg                                                                      <  5:257426/149‑1 (MQ=255)
                                                                             aGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACggg                                                                      >  5:184140/1‑149 (MQ=255)
                                                                             aGAACGCTTAAAAAGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACggg                                                                      >  6:68024/1‑149 (MQ=255)
                                                                              gAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACgggg                                                                     >  2:87784/1‑149 (MQ=255)
                                                                              aagcagttgaatcgcttttactgaaattagggtgacgagatgggcagattacggtttaatgcgccccgtTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACggg                                                                      >  1:333410‑M1/70‑148 (MQ=255)
                                                                               aaCGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGgc                                                                    <  3:43100/149‑1 (MQ=255)
                                                                               aaCGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGgc                                                                    <  3:57682/149‑1 (MQ=255)
                                                                                  gCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACgg                                                                                                                     <  4:63432/97‑1 (MQ=255)
                                                                                   cTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCAt                                                                <  4:294255/149‑1 (MQ=255)
                                                                                   cTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTCGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCa                                                                 >  8:329953/1‑148 (MQ=255)
                                                                                    ttAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCt                                                                                                     >  7:15325/1‑111 (MQ=255)
                                                                                    ttAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCt                                                                                                     <  8:15325/111‑1 (MQ=255)
                                                                                    ttAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCgg                                                                              <  8:242968/134‑1 (MQ=255)
                                                                                    ttAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCAt                                                                >  2:304494/1‑148 (MQ=255)
                                                                                    ttAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCAt                                                                >  8:100869/1‑148 (MQ=255)
                                                                                      aaaTCGTGGCGTCCTTAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCAtt                                                               <  2:332786/147‑1 (MQ=255)
                                                                                      aaaTCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTa                                                              >  5:342361/1‑148 (MQ=255)
                                                                                        atttaagCGTTCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAAc                                                           <  2:228442/143‑1 (MQ=255)
                                                                                             ggCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTTCCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTaa                                                      >  7:337403/1‑149 (MQ=255)
                                                                                                   cTGAAACTAAAAACGTTCCTCCGTGGAGGTCCGTTTATATGAATTTGTTGCCCGGACTCGGAATCGATCCAAGGACACGGGGATTTTCAATCCCCTGCTCTTCCGACTGAGCTATCCGGGCAACGGGGCGCATTAATCCGTAATGTGca                                                <  4:147226/149‑1 (MQ=18)
                                                                                                   cTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGTGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGca                                                <  8:144031/149‑1 (MQ=255)
                                                                                                   cTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGgc                                                                    >  3:163530/1‑129 (MQ=255)
                                                                                                   cTGAAACGAAAAACGGACCTCCGTGGAGGTCAGTTTATATGAATTTGGTGCCCGGAATCGGAATCGAACCAAGGACACGGGGACTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGc                                                 <  6:287781/148‑1 (MQ=255)
                                                                                                    tGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGca                                                >  1:46792/1‑148 (MQ=255)
                                                                                                     gAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGcaca                                              >  2:371786/1‑149 (MQ=255)
                                                                                                      aaaCGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACAt                                             >  3:108281/1‑149 (MQ=255)
                                                                                                        aCGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACAtct                                           <  5:157569/149‑1 (MQ=255)
                                                                                                         cGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACAtctc                                          <  8:361793/149‑1 (MQ=255)
                                                                                                           aaaaaCGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGt                                        <  7:61906/149‑1 (MQ=255)
                                                                                                                cGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAAcc                                   <  2:357143/149‑1 (MQ=255)
                                                                                                                     cTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAAtt                              >  6:124492/1‑149 (MQ=255)
                                                                                                                      tCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAAttt                             >  8:94346/1‑149 (MQ=255)
                                                                                                                       ccGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATc                                                                                                         >  1:104721/1‑72 (MQ=255)
                                                                                                                        cGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTc                            <  1:304494/148‑1 (MQ=255)
                                                                                                                        cGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCa                           <  1:87784/149‑1 (MQ=255)
                                                                                                                            gAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTaa                       <  1:204050/149‑1 (MQ=255)
                                                                                                                               gTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGGACATCTCGTCAACCTAATTTCAGTAAAAg                    <  1:72344/149‑1 (MQ=255)
                                                                                                                                  cGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGa                 >  3:299909/1‑149 (MQ=255)
                                                                                                                                       atatGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTa                                                       >  5:275719/1‑106 (MQ=255)
                                                                                                                                        tatGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACggg                                                                      <  7:66860/90‑1 (MQ=40)
                                                                                                                                        tatGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACggg                                                                      >  8:66860/1‑90 (MQ=40)
                                                                                                                                        tatGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGAtt               <  1:97461/145‑1 (MQ=255)
                                                                                                                                        tatGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGAtt               >  2:97461/1‑145 (MQ=255)
                                                                                                                                         atGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACt          >  6:145715/1‑149 (MQ=255)
                                                                                                                                          tGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGGGCTATCCGGGCAACGGGGCGCAGTGAACCGGAAGCTGGACGGCGCGTGAACGTAATGTCAGTAAAAGGGATTccaggg         >  6:49337/1‑144 (MQ=14)
                                                                                                                                          tGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACt          <  5:145715/148‑1 (MQ=255)
                                                                                                                                          tGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACt          <  4:162376/148‑1 (MQ=255)
                                                                                                                                          tGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTg         >  4:170331/1‑149 (MQ=255)
                                                                                                                                           gAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGc        >  4:69680/1‑149 (MQ=255)
                                                                                                                                           gAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGc        >  7:158792/1‑149 (MQ=255)
                                                                                                                                            aaTTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTaaaa                     >  3:25598/1‑135 (MQ=255)
                                                                                                                                            aaTTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTaaaa                     <  4:25598/135‑1 (MQ=255)
                                                                                                                                                tGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTTCCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTaa    <  8:337403/148‑1 (MQ=255)
                                                                                                                                                tGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTaa    <  4:257142/148‑1 (MQ=255)
                                                                                                                                                tGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTaa    <  8:158792/148‑1 (MQ=255)
                                                                                                                                                  gTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGa  <  7:329953/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CCGAATTGGGATATGCCCGCAAATTGCTGGTGATGTGGGGAGAATCTGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGA  >  NC_000913/4362407‑4362700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.