mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 4458808 = | 84 (1.680) | 3 (0.070) | 3/94 | NT | 4.3% | coding (546/996 nt) | yjfF | predicted sugar transporter subunit |
| ? | AP009048 | 4458830 = | 56 (1.220) | coding (568/996 nt) | yjfF | predicted sugar transporter subunit | |||||
| * | ? | AP009048 | 4080177 = | 92 (1.840) | 2 (0.050) | 3/88 | NT | 2.7% | coding (368/759 nt) | glpR | DNA‑binding transcriptional repressor |
| ? | AP009048 | 4080198 = | 64 (1.480) | coding (389/759 nt) | glpR | DNA‑binding transcriptional repressor | |||||
| * | ? | AP009048 | = 4010055 | 66 (1.320) | 3 (0.070) | 3/94 | NT | 4.7% | coding (243/1068 nt) | yhiI | predicted HlyD family secretion protein |
| ? | AP009048 | = 4010069 | 62 (1.350) | coding (257/1068 nt) | yhiI | predicted HlyD family secretion protein | |||||
| * | ? | AP009048 | 3914455 = | 94 (1.880) | 2 (0.050) | 3/90 | NT | 2.5% | coding (74/996 nt) | yiaH | conserved inner membrane protein |
| ? | AP009048 | 3914475 = | 70 (1.590) | coding (54/996 nt) | yiaH | conserved inner membrane protein | |||||
| * | ? | AP009048 | 3782731 = | 64 (1.280) | 3 (0.070) | 3/90 | NT | 4.9% | coding (721/1494 nt) | yidJ | predicted sulfatase/phosphatase |
| ? | AP009048 | 3782753 = | 61 (1.380) | coding (743/1494 nt) | yidJ | predicted sulfatase/phosphatase | |||||
| * | ? | AP009048 | 3716851 = | 70 (1.400) | 3 (0.070) | 3/88 | NT | 4.8% | coding (28/1542 nt) | atpA | F1 sector of membrane‑bound ATP synthase, alpha subunit |
| ? | AP009048 | 3716881 = | 58 (1.350) | coding (58/1542 nt) | atpA | F1 sector of membrane‑bound ATP synthase, alpha subunit | |||||
| * | ? | AP009048 | = 3361913 | 87 (1.740) | 3 (0.070) | 3/88 | NT | 3.7% | intergenic (+118/‑54) | gltF/yhcA | periplasmic protein/predicted periplasmic chaperone protein |
| ? | AP009048 | = 3361920 | 83 (1.930) | intergenic (+125/‑47) | gltF/yhcA | periplasmic protein/predicted periplasmic chaperone protein | |||||
| * | ? | AP009048 | 3277760 = | 98 (1.960) | 3 (0.070) | 3/94 | NT | 3.1% | coding (761/810 nt) | agaR | DNA‑binding transcriptional dual regulator |
| ? | AP009048 | 3277781 = | 98 (2.130) | coding (740/810 nt) | agaR | DNA‑binding transcriptional dual regulator | |||||
| * | ? | AP009048 | = 2912106 | 65 (1.300) | 3 (0.060) | 3/96 | NT | 4.1% | coding (202/2235 nt) | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase |
| ? | AP009048 | = 2912128 | 78 (1.660) | coding (180/2235 nt) | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase | |||||
| * | ? | AP009048 | = 971569 | 63 (1.260) | 3 (0.070) | 3/90 | NT | 4.5% | coding (296/747 nt) | kdsB | 3‑deoxy‑manno‑octulosonate cytidylyltransferase |
| ? | AP009048 | = 971584 | 73 (1.660) | coding (311/747 nt) | kdsB | 3‑deoxy‑manno‑octulosonate cytidylyltransferase | |||||