| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3914455 = | 94 (1.880) | 2 (0.050) | 3/90 | NT | 2.5% | coding (74/996 nt) | yiaH | conserved inner membrane protein |
| ? | AP009048 | 3914475 = | 70 (1.590) | coding (54/996 nt) | yiaH | conserved inner membrane protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGCAGCCCAAAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCA‑CACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3914528‑3914455‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccacCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCTGCATCTGTGTCTCTGTATCT > AP009048/3914475‑3914544 ATGCAGCCCAAAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCA‑CAC < 1:4184316/71‑1ATGCAGCCCAAAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCA‑CAC < 1:2968590/71‑1 CCCAAAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTG‑TGAATCATCACCACC < 1:739017/69‑1 AAAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCA‑C < 1:1352169/60‑1 AAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCA‑C > 1:154769/1‑59 AACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCA‑CA < 1:2439265/43‑1 GTGGTGATGATTCA‑CACTACCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCT > 1:3603622/1‑70 GTGATGATTCA‑CACCACCATTAAACACGCTATCCCTCGCAGGTTATC > 1:4591112/1‑47 CACCACCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCTGCATCTGTGTCTCTG > 1:3466020/1‑71 ACCACCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGTGCTGCATCTGTGTCTCTGT < 1:2657347/71‑1 ACCACCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCTGCATCTGTGTCTCTGT < 1:1950890/71‑1 ACCACCATTAAACACGCTATCCCTCGCAGGTTATCAAT < 1:3570268/38‑1 ACCACCATTAAACACGCTATCCCTCGCAGGTTATCAAT < 1:612242/38‑1 CCACCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCTGCATCTGTGTCTCTGT > 1:4559911/1‑70 CCACCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCTGCATCT < 1:74515/60‑1 ACCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCTGCATCTGTGTCTCTGTATC > 1:3605790/1‑71 ACCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCTGCATCTGTGTCTCTGTATC > 1:4450400/1‑71 CCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCTGCATCTGTGTCTCTGTATCT < 1:2426062/71‑1 CCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCTGCATCTGTGTCTCTGTATCT > 1:576211/1‑71 ATGCAGCCCAAAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCA‑CACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3914528‑3914455‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccacCATTAAACACGCTATCCCTCGCAGGTTATCAATCCAGTAAATTTTGGGCTGCATCTGTGTCTCTGTATCT > AP009048/3914475‑3914544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |