| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 542,271 | IS5 (–) +4 bp | 42.9% | coding (136‑139/1668 nt) | fdrA → | putative NAD(P)‑binding acyl‑CoA synthetase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 269666 = | NA (NA) | 5 (0.280) | 5/270 | NT | 32.7% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 542274 | 10 (0.570) | coding (139/1668 nt) | fdrA | putative NAD(P)‑binding acyl‑CoA synthetase | |||||
| * | ? | CP009273 | = 270860 | NA (NA) | 10 (0.560) | 9/270 | NT | 49.2% | noncoding (320/1221 nt) | IS30 | repeat region |
| ? | CP009273 | 542271 = | 10 (0.570) | coding (136/1668 nt) | fdrA | putative NAD(P)‑binding acyl‑CoA synthetase | |||||
AGGAGTTGTTATGATCCACGCCTTTATTAAAAAAGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCA > CP009273/542126‑542416 | aGGAGTTGTTATGATCCACGCCTTTATTAAAAAAGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAg > 1:102027/1‑149 (MQ=255) aTGATCCACGCCTTTATTAAAAAAGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATAc > 2:126206/1‑143 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGGTACCACGGGTTTCTGGCCTg > 1:113177‑M2/125‑149 (MQ=255) cTTTATTAAAAAAGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGggaaggtgcgaataa < 2:192042‑M2/143‑16 (MQ=255) aaaaaGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGAc > 2:153694/1‑143 (MQ=255) aGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGggaaggtgcgaataagcggggaaattc > 2:85366‑M2/1‑116 (MQ=255) ggggtTTTCAGGGTTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAAAAATATGGACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAac < 1:63766/146‑1 (MQ=255) ttCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAacgccacg > 1:8048/1‑149 (MQ=255) ttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGATACCACAGGTTTCTGTCATGACGATTTTAATAACGCCccgccg > 1:40888‑M2/102‑149 (MQ=255) atgccgaatgtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGATACCACAGGTTTCTGGCATGACGCTTTTAATAACGCCACGCCGa > 2:36457‑M2/95‑143 (MQ=255) gTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 2:101031‑M2/143‑47 (MQ=255) aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGTACGATAGTTGc < 2:180872‑M2/60‑1 (MQ=255) tttCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGGGGCAATTCGt > 1:275273/1‑149 (MQ=255) aCGAAAACTCAGCCAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCg < 1:175116/149‑1 (MQ=255) tCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc > 1:252561‑M2/1‑69 (MQ=255) tCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAgcggcg > 1:237582/1‑149 (MQ=255) aTCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCgg < 1:143742/149‑1 (MQ=255) cAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGCTTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCgggg > 1:26033/1‑149 (MQ=255) ctccatatgccaaacatgatctcatctcagggtcttgttcgcaccttccTTAGCTACCACAGGTTTCTGGCATGACTATTTTAATCACCCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGCAGCGGCGGATGCGGGGATCgcgc < 1:183527‑M2/100‑1 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAgg < 1:116376‑M2/103‑1 (MQ=255) atgacaaacaggatctcatatcagggacttgtccgcaccttccTTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGa < 1:126322‑M2/106‑1 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGGTACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAGTTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATgcagc > 2:227079‑M2/29‑143 (MQ=255) gatgGGTACGCCCGCCAATAAAGCGTTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc < 1:303571‑M2/149‑118 (MQ=255) gatgGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGCGTATGCAGCCGCTTg > 1:14743/1‑149 (MQ=255) catatcagggacttgttcgcaccttccTTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTGGCGAAGCGGCGGATGCGGGGAGCGCGCGGGCGATTATGCAGCAGCTTGa > 1:193107‑M2/28‑149 (MQ=255) cAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGgcgc > 2:279077/1‑143 (MQ=255) accttccTTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTgg < 1:189467‑M2/142‑1 (MQ=255) ttccTTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGgcgc > 1:115178‑M2/5‑149 (MQ=255) gTTATTAGATACCACAGGTTTCTGGCATGACGATTTGAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAaacaac < 2:6909/143‑1 (MQ=255) ttattaGATACCACAGGTTTCTGGCATGACGATTTTAATAACACCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCa > 1:312564/1‑149 (MQ=255) | AGGAGTTGTTATGATCCACGCCTTTATTAAAAAAGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCA > CP009273/542126‑542416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |