BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	496355 =	4154 (1.140)	212 (0.060)	84/232	57.0	5.4%	intergenic (‑55/+29)	JCVSYN2_02275/JCVSYN2_02280	HPr(Ser) kinase/phosphatase/ECF transporter S component
*	?	CP016816	496379 =	3670 (1.090)	212 (0.060)	84/232	57.0	5.4%	intergenic (‑79/+5)	JCVSYN2_02275/JCVSYN2_02280	HPr(Ser) kinase/phosphatase/ECF transporter S component
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 4191 total aligned reads displayed.

TTTCAAATTTTAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAATATAAAACTAATTC  >  CP016816/496252‑496506

tttCAAATTTTAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACttatta                                                                                                                                 >  1:4562702/1‑128 (MQ=255)

 ttCAAATTTTAGATTATCAGTAAGATCTTTTATTGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTAt                                                                                                                                <  2:1470808/128‑1 (MQ=255)

  tCAAATTTTAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATc                                                                                                                               >  1:5615722/1‑128 (MQ=255)

    aaaTTTTAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCaa                                                                                                                             >  2:2323310/1‑128 (MQ=255)

    aaaTTTTAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCaa                                                                                                                             <  1:1868248/128‑1 (MQ=255)

    aaaTTTTAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCaa                                                                                                                             >  1:6717782/1‑128 (MQ=255)

     aaTTTTAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAAt                                                                                                                            >  2:5581288/1‑128 (MQ=255)

      aTTTTAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAAtt                                                                                                                           >  2:2834398/1‑128 (MQ=255)

      aTTTTAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAAtt                                                                                                                           >  2:4497682/1‑128 (MQ=255)

       ttttAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTa                                                                                                                          >  2:4628062/1‑128 (MQ=255)

        tttAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAg                                                                                                                         >  1:1721208/1‑128 (MQ=255)

        tttAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAg                                                                                                                         >  2:6983343/1‑128 (MQ=255)

          tAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCGTATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGaa                                                                                                                       >  1:2062367/1‑128 (MQ=255)

            gATTATCAGTAAGATATTTTATGTTAAATTTTTACATATAATCTGCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAata                                                                                                                     <  1:575755/128‑1 (MQ=255)

              ttATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATAtt                                                                                                                   <  1:6135519/128‑1 (MQ=255)

               tATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTa                                                                                                                  >  2:3000790/1‑128 (MQ=255)

               tATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTa                                                                                                                  <  2:4770485/128‑1 (MQ=255)

                aTCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTAc                                                                                                                 <  2:3343160/128‑1 (MQ=255)

                 tCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACa                                                                                                                <  1:161521/128‑1 (MQ=255)

                  cAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAg                                                                                                               >  1:283333/1‑128 (MQ=255)

                   aGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGc                                                                                                              >  1:3508368/1‑128 (MQ=255)

                     tAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTAc                                                                                                                 >  2:6686799/1‑123 (MQ=255)

                        gATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGcatcat                                                                                                         >  2:6011259/1‑128 (MQ=255)

                                    tAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAAATTTACTATATTCATGTATAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTc                                                                                             <  1:5991549/128‑1 (MQ=255)

                                     aaaTTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCa                                                                                            <  1:7008521/128‑1 (MQ=255)

                                       aTTTTTCCATATAATCTCCTTATAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCAtt                                                                                          <  2:8858/128‑1 (MQ=255)

                                          tttCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTc                                                                                       >  2:5188240/1‑128 (MQ=255)

                                          tttCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTc                                                                                       >  2:3614162/1‑128 (MQ=255)

                                           ttCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCt                                                                                      >  2:3213953/1‑128 (MQ=255)

                                           ttCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCt                                                                                      >  1:6309483/1‑128 (MQ=255)

                                             ccATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTAt                                                                                    >  2:7144218/1‑128 (MQ=255)

                                              cATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTAtt                                                                                   <  1:3076731/128‑1 (MQ=255)

                                               atatAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGcatc                                                                                                           >  1:5494694/1‑103 (MQ=255)

                                                 ataATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTAttttt                                                                                >  2:6524097/1‑128 (MQ=255)

                                                 ataATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTAttttt                                                                                >  2:6872829/1‑128 (MQ=255)

                                                 ataATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTAttttt                                                                                >  2:7866975/1‑128 (MQ=255)

                                                   aaTCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTg                                                                              <  2:6193170/128‑1 (MQ=255)

                                                   aaTCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTg                                                                              >  2:2184530/1‑128 (MQ=255)

                                                    aTCTACTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGt                                                                             <  1:3627735/128‑1 (MQ=255)

                                                     tctcCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTa                                                                            <  2:2431597/128‑1 (MQ=255)

                                                      ctcCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTAtttttt                                                                               <  2:1141049/124‑1 (MQ=255)

                                                         attttAAAAGTTAATATAATTTTACTATATTAATGTTTAAAAATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTa                                                                        <  1:3224239/127‑1 (MQ=255)

                                                           tttAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCCATTTTTTGTATTTaaa                                                                      <  2:2716208/128‑1 (MQ=255)

                                                                 ctttAATATAATTTTACTATATTAAAGTTTAAACAAAAAAAAAGTGCTTGCTATCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCtttt                                                                <  2:7456706/126‑1 (MQ=255)

                                                                 cGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAAtatatt                                                                >  2:7704578/1‑123 (MQ=255)

                                                                 cGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCtttt                                                                <  2:7254900/128‑1 (MQ=255)

                                                                 cGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCtttt                                                                <  1:1437633/128‑1 (MQ=255)

                                                                      atatAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTTTCTATTTTTTGTATTTAAATCTTTTtttat                                                           >  1:870520/1‑128 (MQ=255)

                                                                        ataATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCtt                                                                  >  2:5826952/1‑119 (MQ=255)

                                                                             tttACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAata                                                    <  1:5344236/128‑1 (MQ=255)

                                                                             tttACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAata                                                    >  2:5341036/1‑128 (MQ=255)

                                                                             tttAATATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTAAAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAata                                                    <  1:5017950/128‑1 (MQ=255)

                                                                                aCTATACTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAg                                                 >  2:3105224/1‑128 (MQ=255)

                                                                                     atTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCAc                                            >  1:758609/1‑128 (MQ=255)

                                                                                       tAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCActc                                          <  2:1896803/128‑1 (MQ=255)

                                                                                       tAATGTTTAAACATAAAAAAAGTGATTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCActc                                          <  1:2454597/128‑1 (MQ=255)

                                                                                          tGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTa                                       >  2:1019324/1‑128 (MQ=255)

                                                                                            tttAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTAtt                                     >  1:7717508/1‑128 (MQ=255)

                                                                                                aaCATATAAAAAGTGCTTGCTAGCTCTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAg                                 <  1:2961765/128‑1 (MQ=255)

                                                                                                aaCATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAg                                 <  1:2184530/128‑1 (MQ=255)

                                                                                                aaCATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAg                                 <  2:4033228/128‑1 (MQ=255)

                                                                                                  cATTAAAAAAGTGCTTGCTAGCTCTTTTTATCAATTAGAATATTAAAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCa                               <  2:1627955/128‑1 (MQ=255)

                                                                                                  cATAAAAATAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCa                               <  1:3965909/128‑1 (MQ=255)

                                                                                                  cATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCa                               >  2:2045886/1‑128 (MQ=255)

                                                                                                  cATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCa                               <  1:6572951/128‑1 (MQ=255)

                                                                                                  cATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCa                               <  1:6884365/128‑1 (MQ=255)

                                                                                                   tgataaaaaGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCAt                              >  1:7873651/5‑128 (MQ=255)

                                                                                                   aTAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCAt                              <  2:3910617/128‑1 (MQ=255)

                                                                                                   aTAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCAt                              <  1:4855232/128‑1 (MQ=255)

                                                                                                    tAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATa                             >  2:7587105/1‑128 (MQ=255)

                                                                                                     aaaaaaaGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATaa                            >  2:3737102/1‑128 (MQ=255)

                                                                                                     aaaaaaaGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATaa                            >  1:7279931/1‑128 (MQ=255)

                                                                                                     aaaaaaaGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATaa                            >  2:5458297/1‑128 (MQ=255)

                                                                                                      aaaaaaGTGCTTTCTAGCACTTTTTATAAATTATAATATTACAGCATAATTTCTTAATATTCATTGTCTATTTTTTTTATTTAAATCTTTTTTAATTAAAATATAGATAACTCTTATTGAATCATAAg                           >  2:4304892/1‑128 (MQ=255)

                                                                                                      aaaaaaGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAg                           <  1:1000174/128‑1 (MQ=255)

                                                                                                       aaaaaGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTATATCTTTTTTAATTAAAATATAGATCACTCTTATTGaatctgtagt                          >  2:1330834/1‑120 (MQ=255)

                                                                                                        aaaaGTGCTTTCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGtt                         <  1:6440004/128‑1 (MQ=255)

                                                                                                         aaaGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTa                        <  1:2601930/128‑1 (MQ=255)

                                                                                                          taGTGCTTGCTAGCAATTTTTATCAATTAGAATATTACAGCATCATTTATTAATATTCATTGTATATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTaa                       <  2:5715790/127‑1 (MQ=255)

                                                                                                          caGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTaa                       <  1:4276698/127‑1 (MQ=255)

                                                                                                          aaGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTaa                       >  1:5860369/1‑128 (MQ=255)

                                                                                                           aGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCAt                              <  2:2579329/120‑1 (MQ=255)

                                                                                                           aGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAAt                      >  2:4950405/1‑128 (MQ=255)

                                                                                                           aGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAAt                      <  2:6366954/128‑1 (MQ=255)

                                                                                                            gTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATa                     >  2:3475526/1‑128 (MQ=255)

                                                                                                             tgcttgctAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATat                    >  1:1176734/1‑127 (MQ=255)

                                                                                                                   ctAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAata              >  1:2725780/1‑128 (MQ=255)

                                                                                                                   ctAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAata              >  2:1777277/1‑128 (MQ=255)

                                                                                                                   ctAGCACTTTTTATCAATTAGAATATTACAGCATCATTTATTAATATTCATTGGCTATTTTTTTTATTTAAATCTTTTTTAATAAAAATATAGATCAATCTTAGAGAAGCATAAGTTAATAGAGAata              >  2:4182519/1‑128 (MQ=255)

                                                                                                                   caaGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAata              >  1:7434039/3‑128 (MQ=255)

                                                                                                                    gaGCACTTTTTATCAATTAGAATATTACAGCATAATTTCTTAATATTCATTGTATATTTTTTGTTTTTTAATCTTTTTTAATTTAATTTTTGATGACTCTTTTTTAAGCATAAGTTAATAGTGatgat             >  1:4110255/2‑124 (MQ=255)

                                                                                                                     aGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTTAAGCTTAAGATAATAGTGAAtata            >  1:4432507/1‑128 (MQ=255)

                                                                                                                      gCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTTTTGAAGCATAAGTTAATAGTGAATATaa           >  1:7127197/1‑128 (MQ=255)

                                                                                                                      gCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAATATaa           >  1:2339207/1‑128 (MQ=255)

                                                                                                                       cACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAATATaaa          >  1:4687224/1‑128 (MQ=255)

                                                                                                                       cACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAATATaaa          <  2:5057087/128‑1 (MQ=255)

                                                                                                                       cACTTTTTATAAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAATATaaa          <  1:1321677/128‑1 (MQ=255)

                                                                                                                           ttttATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAATATAAAACTa      <  1:3391786/128‑1 (MQ=255)

                                                                                                                            tttATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAATATAAAACTaa     <  1:3821446/128‑1 (MQ=255)

                                                                                                                             ttATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAATATAAAACTAAt    <  1:5177584/128‑1 (MQ=255)

TTTCAAATTTTAGATTATCAGTAAGATCTTTTATGGTAAATTTTTCCATATAATCTCCTTTTAAACGTTAATATAATTTTACTATATTAATGTTTAAACATAAAAAAAGTGCTTGCTAGCACTTTTTATCAATTAGAATATTACAGCATCATTTCTTAATATTCATTGTCTATTTTTTGTATTTAAATCTTTTTTAATTAAAATATAGATCACTCTTATTGAAGCATAAGTTAATAGTGAATATAAAACTAATTC  >  CP016816/496252‑496506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.