New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437881 =704 (0.190)1215 (0.410) 186/204 6.5 72.0% intergenic (‑185/+237) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437884 375 (0.130)intergenic (‑188/+234) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1716 total aligned reads displayed.

GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008
                                                                                                                                            |                                                                                                                                     
gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGATATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a                                                                                                                                       >  1:3894967/1‑128 (MQ=255)
gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a                                                                                                                                       >  2:1592511/1‑128 (MQ=255)
 aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑at                                                                                                                                      >  2:1275813/1‑128 (MQ=255)
   aCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atat                                                                                                                                    >  1:3743626/1‑128 (MQ=255)
   aCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atat                                                                                                                                    >  1:2809508/1‑128 (MQ=255)
    cTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atata                                                                                                                                   >  2:2140858/1‑128 (MQ=255)
        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACATCCATATTACATATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatata                                                                                                                               >  2:7755666/1‑128 (MQ=255)
        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatata                                                                                                                               >  2:6010111/1‑128 (MQ=255)
        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatata                                                                                                                               >  2:1732806/1‑128 (MQ=255)
             gTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tat                                                                                                                      >  1:496567/1‑128 (MQ=255)
                 ttGTAAGATTCATATTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatat                                                                                                                  <  2:399506/128‑1 (MQ=255)
                   gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatat                                                                                                                >  1:6864466/1‑128 (MQ=255)
                    ttattttattttttAATAAATATTAGAAATAAATATTTTATTTTTAAAATAAATATTTTATTAAATCAAGAAAAGCAAAAAAATCCATATTATCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatata                                                                                                               <  1:4689943/119‑1 (MQ=255)
                     aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGATTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑aataaattaat                                                                                                              >  1:1944179/1‑124 (MQ=255)
                     aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatat                                                                                                              >  2:4183365/1‑128 (MQ=255)
                       gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatataaatatat                                                                                                            >  2:3866297/1‑128 (MQ=255)
                        tttAATTTTTAATAAATATTATAAATAAAAATTTTATTTTTATAATAAATATTTTTGTAAATTAATAACAGCAAAAACCTCCATATTACATATATAGTTA‑‑‑TT‑‑‑‑T‑‑‑‑‑‑ttatatatata‑‑‑‑tatatatatatata                                                                                                           <  1:298005/128‑1 (MQ=255)
                          tcttttttAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAATAAAAGCAAAAACCTCAATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatata                                                                                                         <  2:4327167/125‑1 (MQ=255)
                           cATTTTTATTATATATTATAAATAAAAATTGTATATTTAAAATAAATATTTTATGAAAATACCCAAAGCAAAAACCTCAATATAACCTATAGAGATA‑‑‑AT‑‑‑‑T‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatat                                                                                                        <  2:2381936/128‑1 (MQ=255)
                           cATTTTTAATAAATATTATAAATAAAAATTGTATATATAAAATAAATATATTAGTAAATGAACCAAATCAAAAACCACCATATTAACTATAGAGATA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatat                                                                                                        <  2:7062073/128‑1 (MQ=255)
                             tttttAAAAAATATTAGAAATATAAAATGTATTTTTATAATAAAAATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTAACTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatat                                                                                                      <  1:5850314/128‑3 (MQ=255)
                               tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatgc                                                                                                    >  2:364112/1‑124 (MQ=255)
                               tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatgc                                                                                                    >  2:7634081/1‑124 (MQ=255)
                               tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatat                                                                                                    >  2:1069080/1‑124 (MQ=255)
                                ttAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGAATAAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑T‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatatg                                                                                                   <  2:3726171/128‑6 (MQ=255)
                                 ttataaataTTAGAAATAAAAATTGTTTTTTTAAAATAAATATTTTATTAAATGAAGCAAAGCAAAAAAATCCATATTACATATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatatat                                                                                                  <  1:539686/126‑7 (MQ=255)
                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACATATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatattatag                                                                                                 >  1:4776911/1‑121 (MQ=255)
                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑T‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatataaa                                                                                                 >  2:1384738/1‑121 (MQ=255)
                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatatt‑‑‑‑tatatatatatatatatatatgaa                                                                                                 >  1:5555140/1‑121 (MQ=255)
                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatattctag                                                                                                 >  2:2554821/1‑121 (MQ=255)
                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatataaaat                                                                                                 >  1:3295889/1‑121 (MQ=255)
                                    taaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTCAATGAATCAAAGCAAAAAAATCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGAt                                                                                             <  2:1974700/128‑1 (MQ=255)
                                     aaataTTAGAAATAAAAATTGTATTTTTAAAATAAAAATTTTATTATATGAAGAAAATCAAAAACCACCATATTACCTATAGAGATA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatatgcaagc                                                                                              <  2:6909561/128‑11 (MQ=255)
                                      aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatgcaagatat                                                                                             >  1:1528776/1‑117 (MQ=255)
                                       atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatatataatatc                                                                                            >  2:6242862/1‑116 (MQ=255)
                                       atatAAAAAAAAAAAAATGTATTTTTAAAAAAAATATATTATTAAAACAAACAAAAAAAAAAACACAATATAAACTATATAGAAA‑‑‑AA‑‑‑‑C‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatatatatatat                                                                                            <  2:5824526/128‑13 (MQ=255)
                                          ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGc                                                                                         >  2:3130172/1‑128 (MQ=255)
                                             taaaaaaaaATTTTATTTTTAAAAAATATATTTTTTTAAAATAATAAAATAAAAAACATCTATATAATATATATAGATA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCa                                                                                        <  2:864429/127‑1 (MQ=255)
                                             taaaTAAAAATTTTATTTATAAAAAAAATATTTTATCAAATAAACAAAAACAAAAAACACAATATTAACTATAGAGATA‑‑‑AT‑‑‑‑‑‑‑‑‑‑‑‑TATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAAt                                                                                  <  2:3047577/127‑1 (MQ=255)
                                              aaaTAAAAATTTTATTTTTATAAAAAATATTTTATGAAATTACTATAATCAAAAAAATCTATATTATCTATATAGATA‑‑‑TT‑‑‑‑T‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATaaaa                                                                                   <  1:664389/128‑1 (MQ=255)
                                              aaaTAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                     <  2:3504755/128‑1 (MQ=255)
                                               aaTAAAAATTTTATTTTTAAAATAAATATTTTATCAAATTAATCAAATAAAAAACCTCCATATTACCTATAGAGATA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATa                                                                                      <  2:3339100/128‑1 (MQ=255)
                                                ataataATTGTTTTTTTAAAATAAATATTTTAGGATATGAAGATAATCAAAAACCTCTATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                     <  1:4042350/128‑1 (MQ=255)
                                                 tAAAAATTGTATTTTTAAAATAAATATTTTATTATATTAATCAAAGAAAAAAAATCCATATTAACTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATaaa                                                                                    <  1:2553681/128‑1 (MQ=255)
                                                  aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATGAGCATaaaa                                                                                   >  1:2712636/1‑128 (MQ=255)
                                                  aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATCAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTA‑‑‑AA‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATaaaa                                                                                   <  2:6610521/128‑1 (MQ=255)
                                                    aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCTAGCGATCAGCATAAAATGGTGa                                                                             >  1:1314440/1‑128 (MQ=255)
                                                     aaTTGTATTTTTTAAATAAATATATTATTAAATTAATCAAATCAAAAAACTACATATTACATATAGAGTTA‑‑‑TTTA‑‑T‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTg                                                                              <  1:5121542/128‑1 (MQ=255)
                                                       ttGTATTTATAAAATAAATATTTTAGTTAATGAATAAAAGAAAAAAAATCCATATTAACTATAGAGTTA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTg                                                                              <  2:4671905/128‑1 (MQ=255)
                                                         ttataTTTAAAATAAATATTATATTATATTAAGAAAATCAAAAACATACATATTAACTATAGAGTTA‑‑‑AT‑‑‑‑GATATATATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTg                                                                              <  2:2916240/127‑1 (MQ=255)
                                                          tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AC‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGata                                                                           >  2:2792622/1‑126 (MQ=255)
                                                           aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAAACTCCATATAACATATAGAGATA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAAt                                                                          <  1:6751911/128‑1 (MQ=255)
                                                           aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGCGATCAGCATAAAATTGTTAAAt                                                                          >  2:6391643/1‑128 (MQ=255)
                                                             ttttAAAATAAATATTTTATTAAATGAAGCAAATCAAAAACCTAAATATTATCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCt                                                                  <  1:6094371/128‑1 (MQ=255)
                                                                 aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATATGAGt                                                              >  1:5702660/1‑128 (MQ=255)
                                                                     taaataTTTTAGTAAATGAATCAAATCAAAAAACTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGa                                                                <  2:6524203/128‑1 (MQ=255)
                                                                     taaataTTTTAGGAAATTAATCAAACAAAAAACCACCATATTACATATAGAGTTA‑‑‑AA‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGt                                                              <  1:5258506/128‑1 (MQ=255)
                                                                      aaataTTTTATTAAATTAATAAAAGAAAAAACATCCATATTACCTATAGAGTTA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                               <  1:113005/128‑1 (MQ=255)
                                                                        atatTTTATTATATGAAGCAAATCAAAAAAATCCATATTAAATATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                             <  1:7008194/128‑1 (MQ=255)
                                                                              tattataTGAAGAAAATCAAAAAACTCTATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATATATATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTc                                                         <  2:1174328/122‑1 (MQ=255)
                                                                                    aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCTATCAGCATAAAATGGTGAAATTTATATCTTAGTTTGTGTTAAAttt                                                 >  1:1645179/1‑128 (MQ=255)
                                                                                        agcaaagcaaAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGCTATCAGAATAAAATTGTGAAATTTATATCTGATTTTGTATAAAAttttttg                                             >  1:4309208/1‑124 (MQ=255)
                                                                                         taaaagaaaaAACCTCAATATTATCTATAGAGTTA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGt                                            <  1:6391643/126‑1 (MQ=255)
                                                                                           aaagcaaaAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATATAAGCAAGAGATAATAATAAAATAGATATATTTAGATCAGAGTTTTTATTAAAttattattttat                                        >  2:4947083/1‑118 (MQ=255)
                                                                                              gcaaaAACCTCAATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt                                     <  2:2280221/128‑1 (MQ=255)
                                                                                              gaaaaaaCCTCTATAATAGCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATTTATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                       <  2:5237708/126‑1 (MQ=255)
                                                                                               caaaAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAATCTATCAGAATAATATTGTGAATTATAGATCTGAGTTGGTATTAAATTTATATTTtttat                                      >  1:2413040/1‑128 (MQ=255)
                                                                                               caaaAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGCGATCAGCATAAAATAGAGATATATATATCTGATTTGGTCTATAATATTTATTTtttatat                                    >  1:922856/1‑126 (MQ=255)
                                                                                                 aaaaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCATCAAAAAATGGTGAATTATAGATCTGAGTTGCTCTTAAATATTTAGTTtttattt                                    >  1:7165399/1‑128 (MQ=255)
                                                                                                 aaaaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGCGATCAGTATAAAATGGTGAAATTTATATCTGATTTTGTCTAATATATTTAGTTtatattt                                    >  1:7767126/1‑128 (MQ=255)
                                                                                                  aaaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCTAGCGATCAGAATAATATTGTGAAATTTAGATCTGAGTTTGTATTAAATTTGTTGTTtttattta                                   >  1:1014028/1‑128 (MQ=255)
                                                                                                   aaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGCTCAACATAAAATTGTGAAATTTAGATCTGAGTTGTTCTTATATTTGTAGTTTttatttat                                  >  2:4517639/1‑128 (MQ=255)
                                                                                                    accaccATATTAACTATAGAGTTAAATATA‑‑‑T‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata                                 <  1:4480105/128‑1 (MQ=255)
                                                                                                    aCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATATATATATATATATA‑‑‑‑TATATATATATATATAT‑‑AAAAGCTATCATAATAAAATTGTGAAATATATATCTGAGTTTGTATTATATTTTTAGTTtttattta                                   >  2:6743489/1‑128 (MQ=255)
                                                                                                     acTCAATAATACCTATATAGTTA‑‑‑TT‑‑‑‑‑‑‑‑‑‑‑‑TATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                          <  1:2291286/127‑1 (MQ=255)
                                                                                                      cTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGATATCAGAATAAAATTGAGATATTTAGATATGATTTTTTATTTAATTTATATTATTTATTtatattat                             >  2:5642922/1‑124 (MQ=255)
                                                                                                        ccATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑‑‑ATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                   >  2:2700170/1‑128 (MQ=255)
                                                                                                        aaatatTAAATATAGAGATA‑‑‑ATTA‑‑T‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                           <  2:7863429/126‑1 (MQ=255)
                                                                                                         cATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta                            >  2:4801369/1‑128 (MQ=255)
                                                                                                         aatatTAACTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                          <  1:2095395/127‑1 (MQ=255)
                                                                                                           tatTAACTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTCTATTTATAGTTtata                          <  2:7326726/128‑1 (MQ=255)
                                                                                                              tACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑TCAAGCTATCAGCATAAAATGGTGAAATATAGATCTGAGTTTGTCTAAAATTTCTAGTTTATATTTATATTTTATAAAg                       >  1:7875239/1‑128 (MQ=255)
                                                                                                              tACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGCTCAGCATAAAATGGTGAAATTTATATATGAGTTGGTCTTATATTTGTAGTTTTTATATATAGTTTATAAAGtt                     >  2:572813/1‑128 (MQ=255)
                                                                                                                ccTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑CCAAGAGAAGAGCATAAAATGGTGAATTTTAGATCTGAGTTTGTTATAATTTTCTATTTTTTTTTtatatgttttaatttt                     >  1:6201568/1‑116 (MQ=255)
                                                                                                                   atatattaa‑‑‑aT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAtt              <  1:4138791/120‑1 (MQ=255)
                                                                                                                   ataGAGTTA‑‑‑ATCA‑‑T‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaatta                <  2:5096629/128‑3 (MQ=255)
                                                                                                                     agagTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGCGATCAGAAAAAAATGGTGAATTTTATATGTGAGTTGTTGTTTATTATGTAGTTTTTATTTATTGTTTATTAAGATTATAttt              >  2:547022/1‑128 (MQ=255)
                                                                                                                                 gttaatgatatatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGATATTTATATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATAGTTTATAAAGTTAATAAttt             >  1:1824500/12‑128 (MQ=38)
                                                                                                                                  atttatatatatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa            <  1:7491202/118‑1 (MQ=255)
                                                                                                                                   taatgatatatatatatata‑‑‑‑tatatatatatatatat‑‑GAAAGCGATCAGAATAAAATTGTGAAATTTATATCTGAGTTTGTATTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTat           >  2:7447587/10‑127 (MQ=37)
                                                                                                                                     tatatatatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAt         <  2:537149/121‑1 (MQ=255)
                                                                                                                                       tatatatatatatata‑‑‑‑tatatatatatatatat‑‑TCAAGCGATCAGCATAAAATTGTGATATATATATGTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATATTTTATAAATTTATTAATTTATAttt       >  1:3473718/6‑128 (MQ=255)
                                                                                                                                       tatatatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGAGATCAGCATAAAATGGTGTAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt       <  1:6511255/123‑1 (MQ=255)
                                                                                                                                       atgatatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt       >  2:1911198/6‑128 (MQ=255)
                                                                                                                                          atatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAACAAAAAATTGTTATATTTATATCTGAGTTGTTCTTAAATTTTTATTTTTTATTTATAGTTTATATATTTAATAATATATATTTTTa    >  1:7375327/3‑128 (MQ=255)
                                                                                                                                          atatatatatata‑‑‑‑tatatatatatatatat‑‑GAAAGCGATCAAAATAAAATTGTGAAATTTATATCTGAGTTGGTCTTAAATTTTTATTTTTTATTTATAGTTTATATATTTAATAATTTATATTTTTa    >  1:7612105/3‑128 (MQ=255)
                                                                                                                                           tatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGCTCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAATTTAATAATTTAGATTTTTat   >  1:3575917/2‑127 (MQ=255)
                                                                                                                                           tatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGATAATAATATAGAtttttta   >  2:6113356/2‑126 (MQ=255)
                                                                                                                                           tatatatatata‑‑‑‑tatatatatatatatat‑‑GAAAGCGATCAGCATAAAATGGTGATATATAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAATTTAATAATTTATATTTTTaa   >  1:3128049/2‑128 (MQ=255)
                                                                                                                                           tatatatatata‑‑‑‑tatatatatatatataa‑‑GCAAGCGATCAGCAAAATATGGAGATATTTATATGATAGTTGGTATTAATTTTTTTGTTTTTTTTTATATTTTATATATTTTATATTTTATTTTTTTaa   >  1:5925610/2‑128 (MQ=255)
                                                                                                                                            |                                                                                                                                     
GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.