New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_KO_pgi = 3046145221 (1.100)18 (0.140)
+TTAGTCAGATGACAAAGTACAAAAGTGCTCAGACA
9/126 15.0 12.6% intergenic (‑244/+23) ygfF/gcvP putative NAD(P)‑dependent oxidoreductase/glycine decarboxylase, PLP‑dependent, subunit P of glycine cleavage complex
?NC_000913_3_KO_pgi = 3504895 170 (0.840)intergenic (+112/+40) frlR/yhfS putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 223 total aligned reads displayed.

CCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCATCCAGACGTTTCAC  >  NC_000913_3_KO_pgi/3046046‑3046242
                                                                                                   |                                                                                                 
    ttCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGaa                                                                                               <  1:3440272/100‑1 (MQ=255)
      ccccTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGaaa                                                                                              <  1:1626041/99‑1 (MQ=255)
       cccTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGaaaa                                                                                             <  2:521563/99‑1 (MQ=255)
       cccTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGaaaa                                                                                             >  2:1126637/1‑99 (MQ=255)
       cccTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGaa                                                                                               >  2:1355554/1‑97 (MQ=255)
         cTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATa                                                                                           <  2:1406166/99‑1 (MQ=255)
            aCCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTc                                                                                        <  2:805836/99‑1 (MQ=255)
             cccTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCg                                                                                       >  1:1591657/1‑99 (MQ=255)
              ccTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACGTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGaa                                                                                     <  1:1660870/100‑1 (MQ=255)
               cTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGaa                                                                                     >  2:2149518/1‑99 (MQ=255)
               cTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAAt                                                                                    >  1:1254858/1‑100 (MQ=255)
                    ccTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGt                                                                                >  1:2531572/1‑99 (MQ=255)
                    ccTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTg                                                                               <  1:2667993/100‑1 (MQ=255)
                     ctctCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATTTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGt                                                                                >  2:2372618/1‑98 (MQ=255)
                     ctctCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGt                                                                                >  2:247971/1‑98 (MQ=255)
                     ctctCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTg                                                                               >  1:586790/1‑99 (MQ=255)
                      tctcCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGt                                                                                >  1:2490527/1‑97 (MQ=255)
                      tctcCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGaa                                                                             >  1:4408290/1‑100 (MQ=255)
                       ctcCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAAt                                                                            >  1:3718563/1‑100 (MQ=255)
                         ccccAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTa                                                                          >  1:2875166/1‑100 (MQ=255)
                          cccAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAGTCAGTGAATTa                                                                          >  2:3218378/1‑99 (MQ=255)
                          cccAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTa                                                                          >  2:4697250/1‑99 (MQ=255)
                          cccAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTa                                                                          <  2:4415560/99‑1 (MQ=255)
                          cccAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTa                                                                          >  2:2261126/1‑99 (MQ=255)
                          cccAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTAc                                                                         >  1:2582330/1‑100 (MQ=255)
                          cccAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTAc                                                                         >  1:2080889/1‑100 (MQ=255)
                           ccAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTAc                                                                         >  2:4490715/1‑99 (MQ=255)
                            cAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTATAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTg                                                                       <  1:4804858/100‑1 (MQ=255)
                            cAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTAc                                                                         >  2:4062803/1‑98 (MQ=255)
                             aaaGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACt                                                                        <  2:1765369/98‑1 (MQ=255)
                               aGGGGCGGGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTa                                                                    <  1:4537231/100‑1 (MQ=255)
                                  ggCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTc                                                                 <  1:764194/100‑1 (MQ=255)
                                   gCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCg                                                                >  1:4185723/1‑100 (MQ=255)
                                    cGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCTAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCg                                                                >  1:3904727/1‑99 (MQ=255)
                                    cGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGc                                                               <  1:4211282/100‑1 (MQ=255)
                                    cGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGc                                                               <  1:1536572/100‑1 (MQ=255)
                                       ggggACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTaa                                                            >  1:3060638/1‑100 (MQ=255)
                                         ggACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAAt                                                           <  2:2008427/99‑1 (MQ=255)
                                         ggACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATc                                                          >  1:2111925/1‑100 (MQ=255)
                                          gACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAATATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCg                                                         >  1:4133951/1‑100 (MQ=255)
                                          gACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATc                                                          >  2:3515125/1‑99 (MQ=255)
                                          gACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATc                                                          <  2:1303691/99‑1 (MQ=255)
                                          gACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCg                                                         <  1:2389464/100‑1 (MQ=255)
                                           aCTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCgg                                                        <  1:2402372/100‑1 (MQ=255)
                                              gTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTAc                                                     >  1:915865/1‑100 (MQ=255)
                                               tCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGt                                                       <  2:928397/97‑1 (MQ=255)
                                               tCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTAc                                                     >  2:2615398/1‑99 (MQ=255)
                                                 tGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACg                                                    >  2:3952327/1‑98 (MQ=255)
                                                 tGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACg                                                    >  1:1950455/1‑98 (MQ=255)
                                                  gAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAg                                                 >  1:561496/1‑100 (MQ=255)
                                                   aGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTCGAAACTAGTCGACTCAGTGAATTACTCGTATTCGCTATTCGGTCCGCAg                                                 >  2:3195118/1‑99 (MQ=255)
                                                    gCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTCGAAAATAGTCGAATCGGTGAATTACTGGTATTCGCTAATCGGTACGCAg                                                 >  2:2989005/1‑98 (MQ=255)
                                                    gCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGa                                               <  1:317565/100‑1 (MQ=255)
                                                     cACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGa                                               <  2:2076201/99‑1 (MQ=255)
                                                       cTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAg                                              >  1:1302945/1‑98 (MQ=255)
                                                       cTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGc                                             <  2:3060769/99‑1 (MQ=255)
                                                        ttttGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAg                                              >  1:326759/1‑97 (MQ=255)
                                                          ttGTACTTTGTCATCTGACTAAAAAGGCTCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGa                                          <  1:3861862/99‑1 (MQ=255)
                                                          ttGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGa                                          <  1:3590161/99‑1 (MQ=255)
                                                           tGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGCTATTCGCTAATCGGTACGCAGGAGCAGaa                                         >  1:4656748/1‑99 (MQ=255)
                                                            gTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGATAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGCAGCAGaa                                         >  1:4981100/1‑98 (MQ=255)
                                                            gTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGaa                                         >  1:3188557/1‑98 (MQ=255)
                                                              aCTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAgg                                     >  1:3290473/1‑100 (MQ=255)
                                                              aCTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAgg                                     >  1:1046245/1‑100 (MQ=255)
                                                               cTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGt                                    >  1:1855022/1‑100 (MQ=255)
                                                                tttGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGt                                    >  2:1906616/1‑99 (MQ=255)
                                                                tttGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGt                                    >  1:4575379/1‑99 (MQ=255)
                                                                 ttGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTa                                  >  1:4937657/1‑100 (MQ=255)
                                                                  tGTCATCTGACTTAAAAGGCGCCGAAGCGCCTTTAGAAAATACTCGAATCAGTGAATTACGGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGt                                    <  2:4888314/97‑1 (MQ=255)
                                                                   gTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTa                                  <  2:2172534/98‑1 (MQ=255)
                                                                     cATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGt                              >  1:1019012/1‑100 (MQ=255)
                                                                      aTCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGt                              <  1:2268888/99‑1 (MQ=255)
                                                                       tCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGt                              >  2:1562386/1‑98 (MQ=255)
                                                                        cTGACTAAAACGGCGCCGAAGCGCCTTTAGAAAAGAGTCGAATGAGTGAATTACTGGTATTCGCACATCGGTACGCAGGAGCAGAACAGGTTACGGtag                            >  2:4178887/1‑97 (MQ=255)
                                                                           aCTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTc                             <  2:238453/95‑1 (MQ=255)
                                                                           aCTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCg                            <  2:4376835/96‑1 (MQ=255)
                                                                           aCTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGcc                          <  2:1645924/98‑1 (MQ=255)
                                                                             tAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGt                        >  2:828615/1‑98 (MQ=255)
                                                                             tAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGt                        >  2:568951/1‑98 (MQ=255)
                                                                              aaaaaGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTaaa                     >  1:3109407/1‑100 (MQ=255)
                                                                               aaaaGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTa                       <  2:1825525/97‑1 (MQ=255)
                                                                                aaaGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAAc                    <  2:3882361/99‑1 (MQ=255)
                                                                                 aaGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAAca                   <  2:2694761/99‑1 (MQ=255)
                                                                                  aGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAAcat                  >  1:3666995/1‑99 (MQ=255)
                                                                                   ggCCCCGAAGCGCCTTTAGAAAATAGTCGAGTCAGAGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTAACg                                <  2:373909/84‑1 (MQ=255)
                                                                                      gcCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACatcatc              >  2:2803475/1‑99 (MQ=255)
                                                                                      gcCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCATcc             <  1:4370994/100‑1 (MQ=255)
                                                                                       ccGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACatcatc              <  2:4582652/98‑1 (MQ=255)
                                                                                       ccGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCATCCa            <  1:1066015/100‑1 (MQ=255)
                                                                                         gAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACatcatc              >  2:3423766/1‑96 (MQ=255)
                                                                                         gAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAAACGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACatcatc              >  2:4623629/1‑96 (MQ=255)
                                                                                          aaGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACatcatc              >  2:4450008/1‑95 (MQ=255)
                                                                                             cgcCTTTAGAAGATAGTCGATTCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAAcatcat               <  2:7997/91‑1 (MQ=255)
                                                                                             cgcCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCATCCAGACGt       <  2:4008644/99‑1 (MQ=255)
                                                                                               ccTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCATCCAGACGttt     <  2:1735472/99‑1 (MQ=255)
                                                                                                 tttAGAAAATAGTCCAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCCTCCAGACGTTTCa   >  2:4887400/1‑99 (MQ=255)
                                                                                                   tAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCATCCAGACGTTTCa   <  2:3985513/97‑1 (MQ=255)
                                                                                                   tAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCATCCAGACGTTTCa   <  2:430607/97‑1 (MQ=255)
                                                                                                   tAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCATCCAGACGTTTCa   <  2:45509/97‑1 (MQ=255)
                                                                                                   tAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCATCCAGACGTTTCAc  <  1:2107722/98‑1 (MQ=255)
                                                                                                   |                                                                                                 
CCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCGCCGTAAACATCATCCAGACGTTTCAC  >  NC_000913_3_KO_pgi/3046046‑3046242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.