New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437885 =1089 (0.520)300 (0.180) 121/204 17.3 26.8% intergenic (‑189/+233) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437880 757 (0.440)intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1374 total aligned reads displayed.

CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012
                                                                                                                                 |                                                                                                                                
  tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatata                                                                                                                                >  2:184980/1‑128 (MQ=255)
  tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatata                                                                                                                                >  1:1623060/1‑128 (MQ=255)
  tATTTTTGTAGTTGCAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatata                                                                                                                                <  2:1227034/128‑1 (MQ=255)
    tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGAGTTAATG‑‑atatatata                                                                                                                              >  2:4243400/1‑128 (MQ=255)
     ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatat                                                                                                                             >  1:1939102/1‑128 (MQ=255)
         ttAGATGTTAGTTTGATTTTTAATATATTTAAGAAATAAATATTGTATTTTTAAAATAAATATTTTAGTAATTGAAGATAAGCAAAAACCTCTATATTAACTATAGAGTTAATG‑‑atatatatatatat                                                                                                                         <  1:2771305/127‑1 (MQ=255)
          tAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatata                                                                                                                        <  2:2305917/128‑1 (MQ=255)
            gTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGCTAATG‑‑atatatatatatatata                                                                                                                      <  2:4308891/128‑1 (MQ=255)
              tttAATTTTCATTTTTAATAAATATTAGAAATAAAATTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatata                                                                                                                    <  2:3410646/126‑1 (MQ=255)
              tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATATTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatata                                                                                                                    >  1:4383528/1‑128 (MQ=255)
               gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatat                                                                                                                   >  1:3769649/1‑128 (MQ=255)
               gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatat                                                                                                                   >  1:2989125/1‑128 (MQ=255)
                tAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatata                                                                                                                  <  2:2703354/128‑1 (MQ=255)
                 aaGTTTCATTTTTAATAAATATTAGAAATAAATATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCTAAAACCTCCATATTACATATAGAGTTAATG‑‑atatatatatatatatatatat                                                                                                                 <  2:1513663/128‑1 (MQ=255)
                 aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCAATATTACATATAGAGTTAATG‑‑atatatatatatatatatatat                                                                                                                 >  2:2004914/1‑128 (MQ=255)
                  tgTTTAATTTTTAATAAATATTATATATAAAAATTTTATTTTTAAAATATATATTTTATTAAATGAATAAAAGCAAAAAACTCCATATTAACTATAGAGTTAATt‑‑atatatatatatatatatatata                                                                                                                <  1:714544/127‑1 (MQ=255)
                  attttaatatttaataAATATTTGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGTATAAAATCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑atatatatatatatatatatata                                                                                                                <  1:2469921/126‑1 (MQ=255)
                  attttCATTTTTAATAAATATTAGATATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatata                                                                                                                <  2:2545796/126‑1 (MQ=255)
                  aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatata                                                                                                                <  2:4157609/128‑1 (MQ=255)
                   gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑atatatatatatatatatatatat                                                                                                               <  2:4547641/128‑1 (MQ=255)
                     ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatgtatatatatatatat                                                                                                             <  1:1436011/128‑1 (MQ=255)
                       cATTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑atatatatatatatatatatatatgcaa                                                                                                           <  2:2457819/128‑5 (MQ=255)
                       cATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGATAATG‑‑atatatatatatatatatatatatacaa                                                                                                           >  1:4180796/1‑125 (MQ=255)
                        aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatatgcaag                                                                                                          >  2:1940244/1‑123 (MQ=255)
                           tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatatatgcaagc                                                                                                       >  1:3837573/1‑122 (MQ=255)
                            ttAATAAATATTATAAATAAAAATTGTTTTTTTAAAATATATATTTTAGGAAATGACGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑TATATATATATATATATATATATATATGCAAGCg                                                                                                    <  1:526255/128‑1 (MQ=255)
                            ttAATAAATATTATAAATAAAAATTGAATTATTTAAATAAATATTTTAGTAAATTAATCAAAGCAAAAAACTAAATATTAACTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAg                                                                                                      <  2:1083473/128‑1 (MQ=255)
                            ttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatatatgcaagcg                                                                                                      <  2:1307268/128‑8 (MQ=255)
                            ttAATAAAAATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatatatgcaagcg                                                                                                      >  2:927483/1‑121 (MQ=255)
                             taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCACATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGa                                                                                                   <  1:4119263/128‑1 (MQ=255)
                              aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGAt                                                                                                  <  1:1848202/128‑1 (MQ=255)
                              aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatatatgaaagagat                                                                                                    >  1:1781962/1‑119 (MQ=255)
                                taaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGAt                                                                                                  <  2:2230436/128‑1 (MQ=255)
                                 aaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAAGAAAAAAACTCAATATTACCTATAGAGTTTATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAg                                                                                               <  1:1002023/128‑1 (MQ=255)
                                    tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                          >  2:528028/1‑128 (MQ=255)
                                       tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGCTCAGCATaaa                                                                                         >  2:3685780/1‑128 (MQ=255)
                                       tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGAAAGCGATCAGCATAAAAt                                                                                       >  2:3130500/1‑128 (MQ=255)
                                        ataaaTAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaaaa                                                                                        <  2:4047682/126‑1 (MQ=255)
                                        aGAAATAAAAATTTTATTTTTATAATAAATATTTTAGTTAATGAACCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaaaa                                                                                        <  1:445223/128‑1 (MQ=255)
                                          aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATg                                                                                      >  1:1726526/1‑128 (MQ=255)
                                           aaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg                                                                                   <  1:3201096/128‑1 (MQ=255)
                                              aaaaaTT‑TATTATTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                               <  2:4469043/128‑1 (MQ=255)
                                               aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATGTGAAAGAGATCATCATAAAATGGTg                                                                                   >  2:3864786/1‑128 (MQ=255)
                                                aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAg                                                                                               >  2:3756780/1‑113 (MQ=255)
                                                  aTTGTATTTTTATAATAAATATTTTATGAAATGATTAAAAGAAAAAAAATCAATATTACCTATAGAGTTAAT‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAtt                                                                              <  2:2372963/128‑1 (MQ=255)
                                                   ttGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                               <  2:3938366/128‑1 (MQ=255)
                                                    tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATA‑‑‑A‑ATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                               >  2:3296342/1‑123 (MQ=255)
                                                      tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                      >  2:726368/1‑128 (MQ=255)
                                                        tttttAAAATAAATATTTTAGTCAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGATAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGa                                                                          <  2:3573477/128‑1 (MQ=255)
                                                        tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGAAAGATATCAGCATAAAATGGTGATATTTATATc                                                                        >  1:1580806/1‑128 (MQ=255)
                                                          tttAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                      <  2:334338/128‑1 (MQ=255)
                                                          tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATTCAAGCTATCATAATATAATGGttatatatata                                                                          >  2:2621741/1‑118 (MQ=255)
                                                            tAAAATAAATATTTTATGAAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                    <  1:2543567/128‑1 (MQ=255)
                                                            tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATTGAGAATTTTAGATCTg                                                                      >  1:3042191/1‑128 (MQ=255)
                                                            tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCa                                                                                             <  1:1309315/101‑1 (MQ=255)
                                                             aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGt                                                                   >  1:3515137/1‑128 (MQ=255)
                                                                 taaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCTAGCTATCAGCATAAAATGTTGAAATTTAGAtagatctgaagat                                                             >  2:1032675/1‑116 (MQ=255)
                                                                   tatatTTTATTAAATTATGCAAAGCAAATAACTCTATATTATCTATAGTGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                             <  1:2127914/127‑1 (MQ=255)
                                                                    atatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCtt                                                            >  1:3710842/1‑128 (MQ=255)
                                                                      atTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCtt                                                            >  1:4260919/1‑128 (MQ=255)
                                                                       ttttAGGAAATGTAGCATAGATAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                         <  1:4054224/128‑1 (MQ=255)
                                                                         ttAGGAAATCAAGCAAAGAAAAAACATCCATATTACCTCTAGAGTTAATG‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                         <  2:2815518/128‑1 (MQ=255)
                                                                           attataTGAATCAAATCAAAAAACTCCATATTATCTATATAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTg                                                     <  1:2671828/123‑1 (MQ=255)
                                                                            ggAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTGATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                    <  2:1397380/128‑1 (MQ=255)
                                                                                  gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGAAATAGATCAGAATAAAATGGTGATATTTATATCTGAGTTGGTCTTAAATTTGTAGt‑ttt                                             >  1:2600958/1‑128 (MQ=255)
                                                                                    agcaaagcaaAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑Ttttatt                                         >  2:117472/1‑128 (MQ=255)
                                                                                     gcaaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATA‑‑CAAGCGATGAGCATAAAATGGTGATATTTAGATATGAGTTGGTATTATATTTTTAGT‑Ttttat                                          >  2:835799/1‑128 (MQ=255)
                                                                                       aaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATATAGATCTGAGTTGGTCTTAAATTTGTAGT‑Ttttat                                          >  2:1768426/1‑128 (MQ=255)
                                                                                       aaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTATATTTTTAGTATtttatt                                         >  1:2217926/1‑128 (MQ=255)
                                                                                       aaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTttatttat                                      <  1:91101/128‑1 (MQ=255)
                                                                                        aagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATAAGAAATATATAAGAAAATAATTGATAAATTTATATATGAGTTGATATTAATTTTATATT‑Ttttatt                                         >  1:8259/1‑128 (MQ=255)
                                                                                         agcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATTCAATATATCACAATAAAAATTTGAATGTTATATCTTTGTTATTGTTAATTTTATAAA‑Ttttatat                                        >  1:2907635/1‑126 (MQ=255)
                                                                                         agcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGGTGATATATAGATCTGAGTTGGTCATAAATTTGTAGT‑TTttatttat                                      >  1:360999/1‑128 (MQ=255)
                                                                                         agcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTAAGT‑TTTTATTtatat                                    >  1:1509783/1‑127 (MQ=255)
                                                                                          gcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑ATTtatatata                                     >  2:3199198/1‑128 (MQ=255)
                                                                                           caaaAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATTCAAGATATCAGAATAAAATTGTTAAATTTATATCTGAGTTTGTCTTAAATTTATAGT‑TTttatttat                                      >  1:582542/1‑128 (MQ=255)
                                                                                            aaaaaCCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTtat                               <  1:3099467/128‑1 (MQ=255)
                                                                                             aaaaCCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTGATAATTTTGTAGT‑TTTTATTTATAGTTta                                >  2:214616/1‑128 (MQ=255)
                                                                                                aCCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTtat                               >  1:1165231/1‑128 (MQ=255)
                                                                                                aCCTCAATATTACATATATAGTTAATG‑‑ATATATATA‑A‑ATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTtat                               <  1:1226315/128‑1 (MQ=255)
                                                                                                 ccTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATA‑A‑GAAAGCGATCAGCATAAAAATATAAAATTTATATCTAATTTTGTCTTAAATTTATAGT‑TTTTATTTATAGTTtaaa                              >  2:3077931/1‑126 (MQ=255)
                                                                                                 ccTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCTATCAGCATAAAATGGTTAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATATATAGTTtatata                            >  1:952832/1‑126 (MQ=255)
                                                                                                  cTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATTCAAGCTATCAGCATAAAATTGTTAAATTTATATCTGAGTTTGTCTTAAATTTATAGT‑TTTTATTTATAGttt                                 >  1:4553001/1‑128 (MQ=255)
                                                                                                    ccATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCTATCAGCATAAAATGGTGAAATATAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTTTTTATAGATTATaatg                           >  1:2316704/1‑126 (MQ=255)
                                                                                                    ccATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCATAATAAAATGGTGAAATATAGATCTGAGTTGGTCTTAAATTTTTAGT‑TTTTATTTATATTTTATAAAGtt                         >  2:1648279/1‑128 (MQ=255)
                                                                                                     cATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGTTCTTAAATTTGTAGA‑TTTTATTTATATTTTATAAAGTta                        >  2:2932025/1‑128 (MQ=255)
                                                                                                      atatTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTtaa                       <  1:3360189/128‑1 (MQ=255)
                                                                                                         ttACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTta                        >  2:3478826/1‑128 (MQ=255)
                                                                                                         ttACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGTAGAAATATAGATCTGAGTTTGTCAAAAATTTATAGT‑TTTTATTTATATTTTATAAATAtaataa                    >  1:3471049/1‑128 (MQ=255)
                                                                                                            ccTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTTAATAAttt                 <  1:2004914/128‑1 (MQ=255)
                                                                                                                tggagTTAATG‑‑ATATATATATATATATATATATATATATGCACGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTTAATAAttt                 >  2:4392636/3‑128 (MQ=255)
                                                                                                                taGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAGT‑TTTTATTTATAGTTTATAAAGTTAATAATTTAg               >  1:3273427/1‑128 (MQ=255)
                                                                                                                 agagTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTTAATAATTTa                >  2:609039/1‑128 (MQ=255)
                                                                                                                 agagTTAATG‑‑ATATATATAT‑T‑TATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTTAATAATTTAGa              <  2:3000996/128‑1 (MQ=255)
                                                                                                                        gttaatgatatatatatatatatatatatatatGCAAGCGATCATCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTTTATT‑TTTTATTTATAGTTTATAAAGTTAATAATTTATAttt           >  1:2061304/8‑128 (MQ=38)
                                                                                                                        gagttaatgatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt           <  2:2083927/119‑1 (MQ=255)
                                                                                                                            atgatatatatatatatatatatatatatGCAAGCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa       >  2:1591995/4‑128 (MQ=255)
                                                                                                                             aatgatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAat      <  1:3923921/124‑1 (MQ=255)
                                                                                                                               atatatatatatatatatatatatatGCAAGCGATCAGCATAATTTGGTGAAATTTAGATCTGAGTTGGTCTTTAATTTTTAGT‑TTTTATTTATAGTTTATATAGTTAATAATTTAGATTTTTAattt    >  2:679055/1‑126 (MQ=255)
                                                                                                                                 atatatatatatatatatatatatGCACGCGCTCAAAATAAAATGGATATATATATATCTGATTGTGTGAAAAATTTATTTT‑TTTTTTATATAGTTTATATATTTAATTAtttatattttttatattt  >  1:1079436/1‑128 (MQ=255)
                                                                                                                                 |                                                                                                                                
CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT‑TTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.