New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 855791	82 (1.030)	3 (0.040)	3/250	12.6	4.1%	coding (14/147 nt)	USA300HOU_0800	hypothetical protein
	?	CP000730	= 1695118	66 (0.900)					coding (24/129 nt)	USA300HOU_1585	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCAGGACGTTAATT  >  CP000730/1694978‑1695255                                                                                                                                             |                                                                                                                                          atatGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGt                                                                                                                                           >  2:474650/1‑141 (MQ=255)     gTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTggg                                                                                                                                       <  1:37663/141‑1 (MQ=255)       ccTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGc                                                                                                                                     >  1:137789/1‑141 (MQ=255)        cTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGcc                                                                                                                                    >  2:112218/1‑141 (MQ=255)         ttAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGccc                                                                                                                                   >  2:79767/1‑141 (MQ=255)          tAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGcccc                                                                                                                                  <  1:78918/141‑1 (MQ=255)           aaaaaTAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGcccca                                                                                                                                 <  2:507391/141‑1 (MQ=255)              aataaaatTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGccccaccc                                                                                                                              >  2:42752/1‑141 (MQ=255)               ataaaatTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTggggtggggcccc                                                                                                                             <  1:452351/141‑10 (MQ=255)                  aaatTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAAc                                                                                                                          >  1:138083/1‑141 (MQ=255)                  aaatTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAAc                                                                                                                          >  1:582392/1‑141 (MQ=255)                  aaatTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAAc                                                                                                                          >  1:157267/1‑141 (MQ=255)                  aaatTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCAAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAAc                                                                                                                          >  1:521926/1‑141 (MQ=255)                   aatTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACt                                                                                                                         <  1:404391/141‑1 (MQ=255)                    atTACAGGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACtt                                                                                                                        <  2:330350/141‑1 (MQ=255)                     ttACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTg                                                                                                                       <  1:818155/141‑1 (MQ=255)                     ttACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTg                                                                                                                       <  2:319298/141‑1 (MQ=255)                       aCATGAGTAAAACTCATGCATAAGGGAGTGGGACTGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGca                                                                                                                     <  1:851794/141‑1 (MQ=255)                       aCATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGca                                                                                                                     <  1:451072/141‑1 (MQ=255)                          tGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACAt                                                                                                                  <  2:265501/141‑1 (MQ=255)                               aaaaCTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAg                                                                                                             <  1:755708/141‑1 (MQ=255)                                 taCTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCACCTTGCACATTATAGTa                                                                                                           >  2:882714/2‑141 (MQ=255)                                 aaCTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTa                                                                                                           <  1:502774/141‑1 (MQ=255)                                  aCTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTaa                                                                                                          >  2:577830/1‑141 (MQ=255)                                  aCTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTaa                                                                                                          <  1:787240/141‑1 (MQ=255)                                    tCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGc                                                                                                        <  2:778595/141‑1 (MQ=255)                                      aTGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTg                                                                                                      <  1:234293/141‑1 (MQ=255)                                              gggAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGAcgaaaag                                                                                              <  1:9546/141‑7 (MQ=255)                                                gAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAATTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTc                                                                                            <  2:48102/141‑1 (MQ=255)                                                gAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTc                                                                                            >  1:345234/1‑141 (MQ=255)                                                 aGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCa                                                                                           >  1:908637/1‑141 (MQ=255)                                                   tGGGACAGAAATGATATTATCGCAAAATTTATTTCGTCGTCCCACCCCAAATTGAATTGCATGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGc                                                                                         >  2:41081/1‑141 (MQ=255)                                                     ggACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCtt                                                                                       >  1:817159/1‑141 (MQ=255)                                                      gACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTc                                                                                      >  2:578322/1‑141 (MQ=255)                                                       aCAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCt                                                                                     >  1:791778/1‑141 (MQ=255)                                                            aaTGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACATGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCCCCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGtt                                                                                >  1:789962/1‑141 (MQ=255)                                                              tGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTgg                                                                              >  1:820422/1‑141 (MQ=255)                                                                 tatTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGc                                                                           <  1:171800/141‑1 (MQ=255)                                                                   ttttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGccc                                                                         <  1:556146/141‑1 (MQ=255)                                                                    tttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGcccc                                                                        >  1:627874/1‑141 (MQ=255)                                                                    tttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGcccc                                                                        <  1:737310/141‑1 (MQ=255)                                                                       cGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGCAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCAtt                                                                     >  2:462662/1‑141 (MQ=255)                                                                                tatttCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGc                                                            <  2:138083/141‑1 (MQ=255)                                                                                 atttCGTCGTCCCCCCCCAACTTGCATTGCCTGTAGAATTCCATTTCGACATTCTCTATTTTGGGGTCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCt                                                           <  2:908131/141‑1 (MQ=21)                                                                                  tttCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTc                                                          >  2:168355/1‑141 (MQ=255)                                                                                  tttCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAACCTGACCTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATGAGCTc                                                          >  2:196242/1‑141 (MQ=255)                                                                                          tcCCCCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAAc                                                  <  2:552659/141‑1 (MQ=255)                                                                                           cccACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAAct                                                 >  1:567060/1‑141 (MQ=255)                                                                                            ccACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCCCATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATCTTAActc                                                >  1:657601/1‑141 (MQ=255)                                                                                               ccccAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGt                                             >  2:77824/1‑141 (MQ=255)                                                                                               ccccAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTCATGTGTTGGGGCCCACTTGTTATAAGCTCATTTTAACTCTGt                                             >  2:257973/1‑141 (MQ=255)                                                                                                     cTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTc                                            <  2:241750/136‑1 (MQ=255)                                                                                                     cTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTc                                            >  1:241750/1‑136 (MQ=255)                                                                                                       tGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTTTCGATGGCt                                     >  2:808085/1‑141 (MQ=255)                                                                                                       tGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCt                                     >  1:89614/1‑141 (MQ=255)                                                                                                       tGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCt                                     <  2:337837/141‑1 (MQ=255)                                                                                                         cATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGc                                   >  1:209306/1‑141 (MQ=255)                                                                                                              ccTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAata                              <  2:908637/141‑1 (MQ=255)                                                                                                               cTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAatat                             <  1:237763/141‑1 (MQ=255)                                                                                                               cTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAatat                             >  2:904649/1‑141 (MQ=255)                                                                                                               cTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAatat                             <  2:641378/141‑1 (MQ=255)                                                                                                                 gTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATaa                           <  2:231737/141‑1 (MQ=255)                                                                                                                  tAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTT‑ATCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACa                         <  2:521926/141‑1 (MQ=255)                                                                                                                      aTTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTg                      <  1:474650/141‑1 (MQ=255)                                                                                                                            aaaagAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGc                >  2:383518/5‑141 (MQ=255)                                                                                                                                 aaaTTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCAgg           <  2:775376/141‑1 (MQ=255)                                                                                                                                  aaTTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCCGGa          >  2:799013/1‑141 (MQ=255)                                                                                                                                  aaTTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCAGGa          >  2:386235/1‑141 (MQ=255)                                                                                                                                    ttCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCAggtct        >  2:186435/1‑138 (MQ=255)                                                                                                                                       tctATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCAGGACGTTa     >  2:65290/1‑141 (MQ=255)                                                                                                                                        ctATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCAGGACGTTaa    <  2:843996/141‑1 (MQ=255)                                                                                                                                         tATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCAGGACGTTAAt   >  1:890357/1‑141 (MQ=255)                                                                                                                                         tATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCAGGACGTTAAt   >  1:586576/1‑141 (MQ=255)                                                                                                                                          aTGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCAGGACGTTAAtt  <  1:578322/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                          ATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCATTGTTATAAGCTCATTTTAACTCTGTCGATGGCTGCCAATATAACATTGTAAAGCCCAGGACGTTAATT  >  CP000730/1694978‑1695255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.