Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,188,484 Δ27 bp coding (3136‑3162/4224 nt) rpoC → RNA polymerase, beta prime subunit

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4188484 4188510 27 91 [0] [0] 90 rpoC RNA polymerase, beta prime subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 41884830 (0.000)87 (0.950) 68/286 0.3 100% coding (3135/4224 nt) rpoC RNA polymerase, beta prime subunit
?NC_000913 4188511 = 0 (0.000)coding (3163/4224 nt) rpoC RNA polymerase, beta prime subunit

AGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCGGGTA  >  NC_000913/4188363‑4188658
                                                                                                                                                    |                                                                                                                                                   
agtaccttacggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccg                                                                                                                                                     <  2:465689‑M2/1‑1 (MQ=255)
     cttacggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagacgGgtctg                                                                                                                                                >  2:1334378‑M2/144‑149 (MQ=255)
      ttacggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGgtctgt                                                                                                                                               >  2:890404‑M2/143‑149 (MQ=255)
         cggtgcggtactggcgaagggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgacgtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCtt                                                                                                                                            <  2:902850‑M2/10‑1 (MQ=255)
         cggtgcggtactggcgaaaggcgatggcgaacaggttggtgggggcgaaaccgttgcaagctgggacccgcacaccatgccggttatcaccgaaggaagagggttggtacgctttactgacatgatcgacggcccgaccggtctgtctg                                                                                                                                            >  2:1425074‑M2/140‑148 (MQ=255)
         cggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaaggaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCtt                                                                                                                                            <  1:451642‑M2/10‑1 (MQ=255)
          ggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTc                                                                                                                                           >  1:827662‑M2/139‑149 (MQ=255)
          ggtgcggtactggcgaaaggcgatggcgaacaggttgcgggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTc                                                                                                                                           <  1:1239206‑M2/11‑1 (MQ=255)
                 tactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCtggtg                                                                                                                                    <  1:1143239‑M2/18‑1 (MQ=255)
                      gcgaacggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgccttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCt                                                                                                                               <  2:802075‑M2/23‑1 (MQ=255)
                      gcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttaccgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCt                                                                                                                               >  2:618177‑M2/127‑149 (MQ=255)
                       cgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTg                                                                                                                              >  2:1288436‑M2/126‑149 (MQ=255)
                         aaaggcgctggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccaggcaGGGCTGTCTTCGCAGGTGGTTCTGGa                                                                                                                            >  2:730061‑M2/124‑149 (MQ=255)
                         aaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaaccgggacccgcacaccatgccggttatcaccgaagtaagcgggtttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGa                                                                                                                            <  2:954188‑M2/26‑1 (MQ=255)
                           aggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGAtt                                                                                                                          >  2:592019‑M2/122‑149 (MQ=255)
                              cgtaggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCg                                                                                                                       <  2:941709‑M2/31‑1 (MQ=255)
                              cgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCg                                                                                                                       <  1:143023‑M2/31‑1 (MQ=255)
                                atggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgcacgcgagaccGGACTGGCTTCGCTGGGGATGCTGGAGTCGGCa                                                                                                                     >  2:1214863‑M2/117‑149 (MQ=255)
                                     gaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACg                                                                                                                <  2:276504‑M2/38‑1 (MQ=255)
                                     gaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACg                                                                                                                >  2:1397685‑M2/112‑149 (MQ=255)
                                       acaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcgccgaagtaagcggttgtgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCGGGTCGTTCGGGATTCCGCAAACCGTa                                                                                                              >  2:19010‑M2/110‑149 (MQ=255)
                                       acaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgtagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTa                                                                                                              <  1:1051603‑M2/40‑1 (MQ=255)
                                                tggcggcgaaaccgttgcaaactgggtcccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctgtcctgacatgatcgacgcacagaccGGTCTGTCTTCGCTGGTGGTTCTGGCTTCCGCAGCGCGTACCGGAggtg                                                                                                     >  1:562263‑M2/101‑149 (MQ=255)
                                                tggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggtg                                                                                                     >  1:1311423‑M2/101‑149 (MQ=255)
                                                tggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggtg                                                                                                     >  1:900733‑M2/101‑149 (MQ=255)
                                                  gcggcgaaaccgttgcaaattgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAggtggt                                                                                                   <  1:629293‑M2/51‑1 (MQ=255)
                                                    ggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTaa                                                                                                 <  1:999676‑M2/53‑1 (MQ=255)
                                                     gcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTaaa                                                                                                >  2:32790‑M2/96‑149 (MQ=255)
                                                       gaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGa                                                                                              >  2:403119‑M2/94‑149 (MQ=255)
                                                        aaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGAt                                                                                             <  1:1504303‑M2/57‑1 (MQ=255)
                                                          accgtttcaacctgggaccctcaccccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGTACTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTAACGCAGGTGGTAAAGATCt                                                                                           <  2:1003463‑M2/59‑1 (MQ=255)
                                                          accgctgcaaactgggatccgcacaccctgccggttatcaccgaagtaagcggttttgtacgctttaatgacatgagcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAATATCt                                                                                           <  2:1111930‑M2/59‑1 (MQ=255)
                                                              ttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGt                                                                                       >  1:151441‑M2/87‑149 (MQ=255)
                                                               tgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTc                                                                                      <  1:858801‑M2/64‑1 (MQ=255)
                                                                  aaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCgg                                                                                   >  1:294879‑M2/83‑149 (MQ=255)
                                                                      tgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGGTTCCGCAGAACGTACCGCAGGGGGTAAAGATCTGCGTCGGGCACt                                                                               >  1:1026424‑M2/79‑149 (MQ=255)
                                                                        ggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGa                                                                             >  2:521425‑M2/77‑149 (MQ=255)
                                                                        ggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGGGGTAAAGATCTGAGTCGGGCACTGa                                                                             >  2:1120995‑M2/77‑149 (MQ=255)
                                                                        ggacccgcacaacatgccggttatcaccgaaggaagcggttttgtacggtttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGa                                                                             <  1:593209‑M2/73‑1 (MQ=255)
                                                                           cccgcacaccatggcggttatcaccggagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGaaaa                                                                          <  2:1399216‑M2/76‑1 (MQ=255)
                                                                              ccaacccatgccggttatccccggagtaagcggttttgtaccctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCg                                                                       <  2:463218‑M2/79‑1 (MQ=255)
                                                                               cacaccgtgccggtcatcaccgaagtaagcggttttgtacgctttactgacatgaccgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGt                                                                      <  2:804201‑M2/80‑1 (MQ=255)
                                                                               cacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGt                                                                      <  1:236070‑M2/80‑1 (MQ=255)
                                                                               cacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGt                                                                      <  1:32790‑M2/80‑1 (MQ=255)
                                                                                acaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGtt                                                                     <  1:1329735‑M2/81‑1 (MQ=255)
                                                                                acaccataccggttatcaccgaagtaagccgttttgtacgctttactgacatgatcgacggccagaccAGTCTGTCTTCCCTGGTCGTCCTGGACTCCGCACAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGtt                                                                     <  1:1556051‑M2/81‑1 (MQ=255)
                                                                                  accatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGa                                                                   <  1:521425‑M2/83‑1 (MQ=255)
                                                                                  accatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGa                                                                   <  1:618177‑M2/83‑1 (MQ=255)
                                                                                    catgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATg                                                                 <  1:1397685‑M2/85‑1 (MQ=255)
                                                                                    catgccggttatcaccgaagtaaacggttttgtacgctttcctgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGGACGTACCGCAGGGGGTCACGATCTGCGTCCGGCACTGAAAATCGTtgacg                                                                 >  2:509674‑M2/65‑147 (MQ=255)
                                                                                     atgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGc                                                                >  2:221872‑M2/64‑149 (MQ=255)
                                                                                              atcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTaa                                                       <  2:1479784‑M2/95‑1 (MQ=255)
                                                                                               tcaccgaagtaagcggttttgtacgcttaactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAac                                                      >  1:937059‑M2/54‑149 (MQ=255)
                                                                                                caccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGCACGTTCCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAacg                                                     <  2:1494205‑M2/97‑1 (MQ=255)
                                                                                                 accgaagtaagcggttttgtacgattaactttaaggattgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGTTAAAGATCTGCGTCGGGCACTGAAAATCGTTGATGCTCAGGGGAaaga                                                    >  1:760025‑M2/52‑149 (MQ=255)
                                                                                                  ccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAacgac                                                   <  1:1354834‑M2/99‑1 (MQ=255)
                                                                                                  ccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAacgac                                                   <  1:1346642‑M2/99‑1 (MQ=255)
                                                                                                  ccgaagtaagcggttttgtacgctatactgacatgatagacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTACGGCAATGAAAATCGTTGATGATCAGGGTAacgac                                                   >  1:1221854‑M2/51‑149 (MQ=255)
                                                                                                  ccgaagtaagcggtttggtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATACTCAGGGTAacgac                                                   >  1:974882‑M2/51‑149 (MQ=255)
                                                                                                     aagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGtt                                                >  1:186410‑M2/48‑149 (MQ=255)
                                                                                                      actaaggggttttgtacgctttagtgccatgatcggtggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTc                                               <  2:469673‑M2/103‑1 (MQ=255)
                                                                                                        taagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAAGCGTTGATGCTCAGGGTAACGACGTTCTg                                             <  1:531005‑M2/105‑1 (MQ=255)
                                                                                                          agcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGAt                                           <  1:403119‑M2/107‑1 (MQ=255)
                                                                                                          agcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGAt                                           <  2:186410‑M2/107‑1 (MQ=255)
                                                                                                           gcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGTTTCCGCAGAACGTACCGGAGGTGGTAAAGGGCATCGGCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGTCGTTCTGATc                                          >  1:297311‑M2/42‑149 (MQ=255)
                                                                                                              gttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCa                                       >  2:619661‑M2/39‑149 (MQ=255)
                                                                                                               ttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAg                                      <  1:1288436‑M2/112‑1 (MQ=255)
                                                                                                                 ttgtacgctttactgacatgatcgacggccagaccGGTAAGTTAGCGCTGGTGGTTAAACCATTCACAGAACGCACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGt                                    >  2:331122‑M2/36‑149 (MQ=255)
                                                                                                                   gtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGGACCGCAGGTGGTAAAGATCTGCGTGCGGTACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTAc                                  <  1:221872‑M2/116‑1 (MQ=255)
                                                                                                                    tacgctttactgacatgctcgacggccagaccGGTATGTCTGTGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTAcc                                 <  1:675379‑M2/117‑1 (MQ=255)
                                                                                                                    tacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTAcc                                 >  2:1246192‑M2/33‑149 (MQ=255)
                                                                                                                    tacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTAcc                                 >  1:660569‑M2/33‑149 (MQ=255)
                                                                                                                    tacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCGGATCCCAGGTAcc                                 >  2:232358‑M2/33‑149 (MQ=255)
                                                                                                                    tacgctttactgacatgatcgacggccagaccGGTCTGTCTTAGCTGATGATGCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTAcc                                 <  1:890404‑M2/117‑1 (MQ=255)
                                                                                                                     acgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCg                                <  2:151441‑M2/118‑1 (MQ=255)
                                                                                                                        ctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGGGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGata                             <  1:1504793‑M2/121‑1 (MQ=255)
                                                                                                                            actgacatgatcgacggccggaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGcc                         >  1:1129072‑M2/25‑149 (MQ=255)
                                                                                                                               gacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAgc                      <  1:686438‑M2/128‑1 (MQ=255)
                                                                                                                                acatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAgcg                     >  1:1478270‑M2/21‑149 (MQ=255)
                                                                                                                                acatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCGGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCCTTGGTGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAgcg                     >  2:1029435‑M2/21‑149 (MQ=255)
                                                                                                                                  atgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGGGCa                   >  1:820334‑M2/19‑149 (MQ=255)
                                                                                                                                   agatcgacggccagaccGGTCAGTCTTCGCTGGTGGTGCTGGATTCCGCAGAACGTACCGCAGGTGGTAACAATATGCGTACAGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTACTGATCCCAGGCACCGATATGCCAGCGCAg                  >  2:942160‑M2/18‑149 (MQ=255)
                                                                                                                                         ccggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGAGTCCGCAGCACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTc            <  2:515725‑M2/138‑1 (MQ=255)
                                                                                                                                         acggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGCTATGCCAGCGCAGTACTTc            >  2:679855‑M2/12‑149 (MQ=255)
                                                                                                                                          cggccagaccGGTCGGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTcc           <  1:571134‑M2/139‑1 (MQ=255)
                                                                                                                                           ggccagtccGGTCTGTGCTCGGTGGAGGTTCTGGATTCCGCAGAACGTACCGGAGGTGGTAAAGGTCTGAGTACGGCCTTGAAAATCGGTGATGGTCAGGGTAACGCCGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCt          <  2:49965‑M2/140‑1 (MQ=255)
                                                                                                                                              cagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGcc       >  2:1320054‑M2/7‑149 (MQ=255)
                                                                                                                                                gaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCgg     <  2:399802‑M2/145‑1 (MQ=255)
                                                                                                                                                gaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCgg     <  2:900733‑M2/145‑1 (MQ=255)
                                                                                                                                                   cGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGccgggca  >  1:535418‑M2/2‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCGGGTA  >  NC_000913/4188363‑4188658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: