mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 35 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 232553 = | 59 (1.090) | 6 (0.120) | 6/258 | 6.0 | 9.4% | intergenic (+4/+44) | yafE/mltD | putative S‑adenosyl‑L‑methionine‑dependent methyltransferase/putative membrane‑bound lytic murein transglycosylase D |
| ? | NC_000913 | 232584 = | 62 (1.260) | intergenic (+35/+13) | yafE/mltD | putative S‑adenosyl‑L‑methionine‑dependent methyltransferase/putative membrane‑bound lytic murein transglycosylase D | |||||
| * | ? | NC_000913 | = 4454799 | 62 (1.150) | 5 (0.100) | 5/270 | 6.8 | 8.0% | coding (812/999 nt) | fbp | fructose‑1,6‑bisphosphatase I |
| ? | NC_000913 | = 4454802 | 55 (1.060) | coding (809/999 nt) | fbp | fructose‑1,6‑bisphosphatase I | |||||
| * | ? | NC_000913 | 2791002 = | 62 (1.150) | 5 (0.100) | 5/270 | 6.8 | 7.7% | coding (1023/1269 nt) | lhgO | L‑2‑hydroxyglutarate oxidase |
| ? | NC_000913 | 2791020 = | 61 (1.180) | coding (1041/1269 nt) | lhgO | L‑2‑hydroxyglutarate oxidase | |||||
| * | ? | NC_000913 | 1396985 = | NA (NA) | 6 (0.120) | 5/272 | 6.9 | 8.6% | coding (910/1017 nt) | insH1 | IS5 transposase and trans‑activator |
| ? | NC_000913 | = 1427868 | 66 (1.220) | coding (859/981 nt) | insH1 | IS5 transposase and trans‑activator | |||||
| * | ? | NC_000913 | 781577 = | 61 (1.130) | 29 (0.550) +GAAG |
5/274 | 6.9 | 40.4% | noncoding (1/76 nt) | lysQ | tRNA‑Lys |
| ? | NC_000913 | = 2521004 | 27 (0.500) | noncoding (76/76 nt) | valU | tRNA‑Val | |||||
| * | ? | NC_000913 | 781369 = | 41 (0.760) | 11 (0.210) +GAAG |
5/274 | 6.9 | 25.0% | noncoding (1/76 nt) | lysZ | tRNA‑Lys |
| ? | NC_000913 | = 2521004 | 27 (0.500) | noncoding (76/76 nt) | valU | tRNA‑Val | |||||
| * | ? | NC_000913 | = 382211 | NA (NA) | 8 (0.150) | 5/272 | 6.9 | NA | coding (538/906 nt) | insD1 | IS2 transposase TnpB |
| ? | NC_000913 | = 382218 | NA (NA) | coding (545/906 nt) | insD1 | IS2 transposase TnpB | |||||
| * | ? | NC_000913 | 838891 = | 68 (1.260) | 4 (0.080) | 4/262 | 7.2 | 6.4% | coding (317/678 nt) | ybiX | Fe(II)‑dependent oxygenase superfamily protein |
| ? | NC_000913 | 838921 = | 54 (1.080) | coding (287/678 nt) | ybiX | Fe(II)‑dependent oxygenase superfamily protein | |||||
| * | ? | NC_000913 | 4528523 = | 49 (0.910) | 4 (0.080) | 4/274 | 7.5 | 8.5% | coding (396/807 nt) | sgcQ | putative nucleoside triphosphatase |
| ? | NC_000913 | 4528543 = | 38 (0.720) | coding (376/807 nt) | sgcQ | putative nucleoside triphosphatase | |||||
| * | ? | NC_000913 | 780554 = | 62 (1.150) | 10 (0.190) +GAAG |
4/274 | 7.5 | 18.8% | noncoding (1/76 nt) | lysT | tRNA‑Lys |
| ? | NC_000913 | = 2521004 | 27 (0.500) | noncoding (76/76 nt) | valU | tRNA‑Val | |||||