| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.010) | 53 (0.790) | 46/284 | 0.4 | 98.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.010) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCA > NC_000913/4001509‑4001789 | tatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatctc > 2:641176‑M2/141‑143 (MQ=255) attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttct > 2:317220‑M2/136‑143 (MQ=255) attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacaccgacgaatcggaacattacgttgaagacgacgacggcctgcatCTCcttct < 1:413156‑M2/8‑1 (MQ=255) ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatctcctgcttctcact > 1:1124150‑M2/129‑139 (MQ=255) tgtcgaaccgcacgacgacgagcgactgcgcgtacaagctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCttt < 2:66023‑M2/16‑1 (MQ=255) gccgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg < 2:643208‑M2/17‑1 (MQ=255) cgacccggacgacgacgcgcgaccgcgcgtacaagctgaccttggccagagcctggcaacccgcccggaactgcaagacatcgaagcatcggcacgtttctttgtagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa < 1:441523‑M2/19‑1 (MQ=255) ggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgttcctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGCTGCg > 1:584372‑M2/119‑143 (MQ=255) cgccgtctaccgactgcgcgaccaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:336286‑M2/28‑1 (MQ=255) gacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATc > 2:193474‑M2/112‑143 (MQ=255) gagcgactgcgcgtacaatctggtcttggccaggggctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACg < 1:95863‑M2/35‑1 (MQ=255) gagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGCTGCGGCAGATCACg > 2:1027338‑M2/109‑143 (MQ=255) agcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCAGGc < 2:682433‑M2/36‑1 (MQ=255) cgcctgcgcgtacaatctgaccttggcctggttctgccacccccccctgaactgtaagacatcgaagcatcggcacgtttctttgaagacgacaacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCg < 2:157797‑M2/38‑1 (MQ=255) cgactgcgcgtacaatctgaacttggcccgagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCg < 1:1023049‑M2/38‑1 (MQ=255) actgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCGCGCCGGt > 1:211308‑M2/104‑143 (MQ=255) tgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGCAGATCACGCCGGTaa > 1:37592‑M2/102‑143 (MQ=255) gcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAAc > 1:62329‑M2/101‑143 (MQ=255) ggcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcagCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACt < 1:198919‑M2/44‑1 (MQ=255) tacaatctgaacttggccagagcctggcaacccgcccggaactgggagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAc > 2:943530‑M2/96‑143 (MQ=255) tacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAc > 2:943578‑M2/96‑143 (MQ=255) aatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgt < 2:771908‑M2/51‑1 (MQ=255) cttgggcgcccgcgggGACCTGGAGCACATCGAGCGACCGGCACGTTTTGTCGAAGACGACGGCGGCCTTCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGTTGCGGAAGATCACGCCGGTAACTCCACTGTGGCAGTGACCATCCGTGAt < 1:200713/135‑1 (MQ=255) cagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATcc > 2:346345‑M2/79‑143 (MQ=255) cctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATGACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAt > 2:811030‑M2/74‑143 (MQ=255) cctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCGGTGAt > 2:811024‑M2/74‑143 (MQ=255) ctggcagcccggccggacctggaaggcatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg < 1:79715‑M2/71‑1 (MQ=255) ctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg < 2:503794‑M2/71‑1 (MQ=255) ctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttcgttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCGCGCCGAGAACGCCACTGTGGCATGTACCATCCGTGCTg > 2:289922‑M2/73‑143 (MQ=255) tggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTGTGCGAGGATGCGGAAGCTCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATgg > 2:376440‑M2/72‑143 (MQ=255) cgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGt < 2:1099332‑M2/80‑1 (MQ=255) ccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcaaCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa < 2:884586‑M2/83‑1 (MQ=255) acccggaagacatcgaagcctcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActct < 2:24013‑M2/87‑1 (MQ=255) caacaagacgtcgacgcatcgggacgcttccttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTACCTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc < 2:256530‑M2/89‑1 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCCGTAACTCCACTGTCGCATTTACCATCCGCGCTGGTCGCCGGTGTCCTCTgcgtg > 1:716160‑M2/52‑143 (MQ=255) agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATGCGTGATGGTCGGATGTTTACTCTgcgtgag > 2:182084‑M2/50‑143 (MQ=255) catcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCTGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgt < 2:734959‑M2/97‑1 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTCGCAGATGCGGCAGATCACGCCGGTCACTCCACTGTGGCATTTACCATCCGTACTGGCCGCCTCTTTACtctgcgtcagcctc > 1:794252‑M2/46‑140 (MQ=255) atcgaagcatcggcacgtttctttgaagacgaagacggcttgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtg > 2:50129‑M2/46‑143 (MQ=255) tcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGCCTGTTTACTCTgcgtgcccgtga > 2:282304‑M2/45‑143 (MQ=255) tcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtga > 2:139588‑M2/45‑143 (MQ=255) cgaagcatgggcacgtttctttgaagacgacggcggcctgcagCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:213165‑M2/100‑1 (MQ=255) gcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc < 2:74906‑M2/104‑1 (MQ=255) ggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGCAGATGCGGAAGCTAGGGGGGGTAACTCCACTGTGGCGTTTACCCTCCGTGCTGGTCGTCTGTTTACTCTGCGTGAGCGGGCGCTGCCCGCt > 2:1159248‑M2/35‑143 (MQ=255) tttcgttgcagacgacgacggcctgcctCTCTTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTATCTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt < 1:809257‑M2/115‑1 (MQ=255) ttctttgcagacgacgacggtctgcatCTCCTTCTTCTTCTTTGCAGCTGCGGAAGATCCCGCCGGTAACTCCACTGTGGCATTTACCATCCGTGCTGGTCGAACATACACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTc < 1:139588‑M2/116‑1 (MQ=255) ttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTc > 2:4886‑M2/28‑143 (MQ=255) tttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGCTGGTCGTCTCTTTCCTCTGCGTGAGCGTCCActgcccgctttcccgccgt > 2:295436‑M2/25‑135 (MQ=255) aagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGGGAACTGCGCGCTTTTCGGCTGTATCg > 2:723586‑M2/21‑143 (MQ=255) acgacgacggcctgcatCTCCTTCATCTTCTTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAt < 2:211308‑M2/126‑1 (MQ=255) cgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGGGATGGTCGTCTGATTAGTCTGCGTGAGCGTGAAATGCCGGCTTTTGGTCTGTAGCGACTGcgc > 1:1034181‑M2/14‑142 (MQ=255) gacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACGATCCGTGATGGTCGTCTGTTTACTCTGCGTGCGCGGGAACTGCCCTCTCTTCGTCTGTATCCtacgcggc > 1:922488‑M2/13‑141 (MQ=255) acggcctgtatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACGGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGc < 1:176080‑M2/132‑1 (MQ=255) gctctgcctcTCCTTCTTCTTCTTTGCACTTGCTGAAGATCACGCCGGTAACTCCAGTGTGGCATTTACCATTCTTTATGTTCGTCTGTTTACGCTGCGTTAGCGTTATCTGCTTGCTTTTTGTCTGTATCGTATGCGTGccc < 1:363680/134‑1 (MQ=255) atCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATCCCCGTCGGGATACTTTGAGTGCGACAGAACTGCCCGCTTTTCGTCTGTGTCGTGTGCGTGCCCGTAGCCa > 1:825428‑M2/3‑143 (MQ=255) | ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCA > NC_000913/4001509‑4001789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |