| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.010) | 53 (0.790) | 46/284 | 0.4 | 98.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.010) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT > NC_000913/4001501‑4001784 | tggTATGGAGTGATGTTGTCGAGCCGGACGTCGACGAGCGACGGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCat < 1:324868/141‑1 (MQ=255) tATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctc > 2:641176‑M1/1‑140 (MQ=255) aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttct > 2:317220‑M1/1‑135 (MQ=255) aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACACCGACGAATCGGAACATTACGTTGAAGACGACGACGGCCTGCATctccttct < 1:413156‑M1/143‑9 (MQ=255) ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttctcact > 1:1124150‑M1/1‑128 (MQ=255) tGTCGAACCGCACGACGACGAGCGACTGCGCGTACAAGCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt < 2:66023‑M1/143‑17 (MQ=255) gccgaACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg < 2:643208‑M1/141‑18 (MQ=255) cGACCCGGACGACGACGCGCGACCGCGCGTACAAGCTGACCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGCAAGACATCGAAGCATCGGCACGTTTCTTTGTAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:441523‑M1/143‑20 (MQ=255) ggACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTCCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagctgcg > 1:584372‑M1/1‑118 (MQ=255) cgccgtctaccgactgcgcgaCCAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 1:336286‑M1/133‑29 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatc > 2:193474‑M1/1‑111 (MQ=255) gaGCGACTGCGCGTACAATCTGGTCTTGGCCAGGGGCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacg < 1:95863‑M1/143‑36 (MQ=255) gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagctgcggcagatcacg > 2:1027338‑M1/1‑108 (MQ=255) aGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcaggc < 2:682433‑M1/143‑37 (MQ=255) cgcctgcGCGTACAATCTGACCTTGGCCTGGTTCTGCCACCCCCCCCTGAACTGTAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACAACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg < 2:157797‑M1/140‑39 (MQ=255) cGACTGCGCGTACAATCTGAACTTGGCCCGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg < 1:1023049‑M1/143‑39 (MQ=255) aCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcgcgccggt > 1:211308‑M1/1‑103 (MQ=255) tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggcagatcacgccggtaa > 1:37592‑M1/1‑101 (MQ=255) gcgcGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaac > 1:62329‑M1/1‑100 (MQ=255) ggcgtACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaact < 1:198919‑M1/142‑45 (MQ=255) tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGGAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac > 2:943530‑M1/1‑95 (MQ=255) tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac > 2:943578‑M1/1‑95 (MQ=255) aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt < 2:771908‑M1/143‑52 (MQ=255) cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcc > 2:346345‑M1/1‑78 (MQ=255) cttgggcgcccgcgggGACCTGGAGCACATCGAGCGACCGGCACGTTTTGTCGAAGACGACGGCGGCCTTCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGTTGCGGAAGATCACGCCGGTAACTCCACTGTGGCAGTGACCATCCGTGAt < 1:200713/135‑1 (MQ=255) ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatgacgccggtaactccactgtggcatttaccatccgtgat > 2:811030‑M1/1‑73 (MQ=255) ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcggtgat > 2:811024‑M1/1‑73 (MQ=255) cTGGCAGCCCGGCCGGACCTGGAAGGCATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg < 1:79715‑M1/143‑72 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg < 2:503794‑M1/143‑72 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCGTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcgcgccgagaacgccactgtggcatgtaccatccgtgctg > 2:289922‑M1/1‑72 (MQ=255) tGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttgtgcgaggatgcggaagctcacgccggtaactccactgtggcatttaccatccgtgatgg > 2:376440‑M1/1‑71 (MQ=255) cgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgt < 2:1099332‑M1/143‑81 (MQ=255) ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAActccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 2:884586‑M1/143‑84 (MQ=255) acccggaagaCATCGAAGCCTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct < 2:24013‑M1/139‑88 (MQ=255) caacaagacgTCGACGCATCGGGACGCTTCCTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtggcatttaccatccgtgatggtcgtctgtttactctgc < 2:256530‑M1/139‑90 (MQ=255) gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcccgtaactccactgtcgcatttaccatccgcgctggtcgccggtgtcctctgcgtg > 1:716160‑M1/1‑51 (MQ=255) aGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatgcgtgatggtcggatgtttactctgcgtgag > 2:182084‑M1/1‑49 (MQ=255) cATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgctggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt < 2:734959‑M1/143‑98 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttcgcagatgcggcagatcacgccggtcactccactgtggcatttaccatccgtactggccgcctctttactctgcgtcagcctc > 1:794252‑M1/1‑45 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGAAGACGGCTTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtg > 2:50129‑M1/1‑45 (MQ=255) tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgcctgtttactctgcgtgcccgtga > 2:282304‑M1/1‑44 (MQ=255) tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtga > 2:139588‑M1/1‑44 (MQ=255) cGAAGCATGGGCACGTTTCTTTGAAGACGACGGCGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 1:213165‑M1/143‑101 (MQ=255) gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc < 2:74906‑M1/143‑105 (MQ=255) ggCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgcagatgcggaagctagggggggtaactccactgtggcgtttaccctccgtgctggtcgtctgtttactctgcgtgagcgggcgctgcccgct > 2:1159248‑M1/1‑34 (MQ=255) tttCGTTGCAGACGACGACGGCCTGCCTctctttcttcttctttgaagatgcggaagatcacgccggtatctccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt < 1:809257‑M1/143‑116 (MQ=255) ttCTTTGCAGACGACGACGGTCTGCATctccttcttcttctttgcagctgcggaagatcccgccggtaactccactgtggcatttaccatccgtgctggtcgaacatacactctgcgtgagcgtgaactgcccgcttttcgtc < 1:139588‑M1/143‑117 (MQ=255) ttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtc > 2:4886‑M1/1‑27 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgctggtcgtctctttcctctgcgtgagcgtccactgcccgctttcccgccgt > 2:295436‑M1/1‑24 (MQ=255) aaGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgggaactgcgcgcttttcggctgtatcg > 2:723586‑M1/1‑20 (MQ=255) acgacgacgGCCTGCATctccttcatcttcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat < 2:211308‑M1/143‑127 (MQ=255) cgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgggatggtcgtctgattagtctgcgtgagcgtgaaatgccggcttttggtctgtagcgactgcgc > 1:1034181‑M1/1‑13 (MQ=255) gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttacgatccgtgatggtcgtctgtttactctgcgtgcgcgggaactgccctctcttcgtctgtatcctacgcggc > 1:922488‑M1/1‑12 (MQ=255) acgGCCTGTATctccttcttcttctttgaagatgcggaagatcacgccggtaactccacggtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgc < 1:176080‑M1/143‑133 (MQ=255) aTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatccccgtcgggatactttgagtgcgacagaactgcccgcttttcgtctgtgtcgtgtgcgtgcccgtagcca > 1:825428‑M1/1‑2 (MQ=255) | CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT > NC_000913/4001501‑4001784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |