BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,299,499	Δ1,199 bp	intergenic (+254/‑485)	ychE → / → oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1299499–1300697	1300697	1–1199	117 [0]	[0] 119	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1299498	0 (0.000)	110 (1.530)	76/274	0.0	100%	intergenic (+253/‑1684)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
*	?	NC_000913	1300698 =	0 (0.000)	110 (1.530)	76/274	0.0	100%	intergenic (+1453/‑484)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 117 total aligned reads displayed.

ATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  >  NC_000913/1299358‑1299640

 ttACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAata                                                                                                                                             <  2:860245‑M1/143‑4 (MQ=255)

    cAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                                                                          <  2:746660‑M1/143‑7 (MQ=255)

     agttagttATAAGGATTTCCTTAACTGCTTCTCCTCCCCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                                                                         <  2:145065‑M1/143‑8 (MQ=255)

     agttagttATAAGGATTTCCTTAACTGCTAGTCCTGACCATCATGTTATTTTTGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                                                                         <  1:315087‑M1/143‑8 (MQ=255)

              taAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGACGAATAATTGAAATGATATTATTAATTCCACTGCCTTTTGTAGATGAAAGTGCTACatacttatcaattgtt                                                                                                                                >  2:630293‑M1/1‑127 (MQ=255)

              taAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTATAGGAAAGTGCTAAataataatcaattgtt                                                                                                                                >  1:1039819‑M1/1‑127 (MQ=255)

               aaGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtta                                                                                                                               <  2:678130‑M1/143‑18 (MQ=255)

               aaGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtta                                                                                                                               >  2:269983‑M1/1‑126 (MQ=255)

                aGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttta                                                                                                                              <  2:479359‑M1/143‑19 (MQ=255)

                    attgcttaaCTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatta                                                                                                                          >  2:944014‑M1/5‑121 (MQ=255)

                     ttCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattat                                                                                                                         >  2:905979‑M1/1‑120 (MQ=255)

                     ttCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataaacaatggttaaattat                                                                                                                         >  2:170672‑M1/1‑120 (MQ=255)

                      tCCTTAACTGTTGCTCCTCACCATCATGTTATTTTCGCCACATCATACTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                                                                        <  1:1172997‑M1/143‑25 (MQ=255)

                      tCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                                                                        <  1:1222031‑M1/143‑25 (MQ=255)

                      tCCTGAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTTGGCTTGCTGAAGTATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                                                                        <  1:617640‑M1/143‑25 (MQ=255)

                        cTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGACGAATACTTGAAATGATATTATTAATTCCACTCCCTTTGATAGAGAAAAGTGCTAAataataataaattgttaaattattgt                                                                                                                      >  2:1251303‑M1/1‑117 (MQ=255)

                         ttAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtg                                                                                                                     <  2:396660‑M1/143‑28 (MQ=255)

                         ttAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATACTGGGCTTGCTGAAGAATAATTGAAATGATATTAGTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAagaatcatcaatgtttaaattattgtg                                                                                                                     >  1:1196801‑M1/1‑116 (MQ=255)

                          tAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                                                                    <  1:707326‑M1/143‑29 (MQ=255)

                            atggcttCTCCTCCCCATCATGTTATTTCCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTTATTCCACTGGCTTTGGTAGAGGAAAGTGCTAAttaataatcaattgttaaattattgtgcat                                                                                                                  <  2:951549‑M1/140‑31 (MQ=255)

                              tgctgcTCCTCACCATCATGTTATGTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                <  2:213277‑M1/143‑33 (MQ=255)

                              tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                <  2:835739‑M1/143‑33 (MQ=255)

                              tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                >  1:451006‑M1/1‑111 (MQ=255)

                                cctctcctCACCTTCATTTTATTTTCGCCACATCATAATCCTTGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttca                                                                                                              <  1:514279‑M1/141‑35 (MQ=255)

                                cTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTACACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttca                                                                                                              >  1:1120615‑M1/1‑109 (MQ=255)

                                 ttCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                                                             >  2:1098635‑M1/1‑108 (MQ=255)

                                     cctcTCCGTCATGTTATTTTCGTCACATCATAACCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCAATGACTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                                                                         <  1:773961‑M1/143‑40 (MQ=255)

                                     cctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                                                                         >  1:485001‑M1/1‑104 (MQ=255)

                                      ctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGGAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                                                                        >  2:1081066‑M1/1‑103 (MQ=255)

                                       tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatttttgtgcatttcacttctgg                                                                                                       >  2:197854‑M1/1‑102 (MQ=255)

                                       tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                                                                       <  1:1248851‑M1/143‑42 (MQ=255)

                                       tcACCATCATGTTATTTTAGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTTAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                                                                       <  2:3133‑M1/143‑42 (MQ=255)

                                         aCCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaa                                                                                                     <  1:928153‑M1/143‑44 (MQ=255)

                                           cgtcaggtTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                   <  2:76539‑M1/141‑46 (MQ=255)

                                           catcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                   >  2:579623‑M1/1‑98 (MQ=255)

                                           catcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                   <  2:711046‑M1/143‑46 (MQ=255)

                                           catcatCGTACTTACGTCACATCATAGTCCTTGGCTTGCTGAAGAATAATTGTAATGATATTATTAATTCCACTCTCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                   <  1:968115‑M1/143‑46 (MQ=255)

                                            atcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGCATAATTGAAATGCTATTATTAATTCCACTGCCTTTGGTAGAGGACAGTGCTACataataatcaattgttacattattgtgcatttctctcctgggaccg                                                                                                  >  2:331451‑M1/1‑97 (MQ=255)

                                             tcatGTTATTTTCGCAATATCAGAATCCTGGGCTTGCTGCAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGATAGAGGAAAGTGCTAAttaataatcaattgttaaattattgtgcatttcactactggaactgt                                                                                                 <  1:1169748‑M1/143‑48 (MQ=255)

                                                tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGACTGTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatcattgtgcattacactactggaactgtaat                                                                                              >  1:622976‑M1/1‑93 (MQ=255)

                                                 gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                                                             <  1:1178336‑M1/143‑52 (MQ=255)

                                                           ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                                                                   >  2:818359‑M1/1‑82 (MQ=255)

                                                           ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                                                                   >  2:818351‑M1/1‑82 (MQ=255)

                                                              catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                                                                <  1:954028‑M1/143‑65 (MQ=255)

                                                              catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                                                                >  2:1198352‑M1/1‑79 (MQ=255)

                                                               atcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCCCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactagaactgtaatcagaaacgatagaca                                                                               >  1:862258‑M1/1‑78 (MQ=255)

                                                                tcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaaacagaaaaaatagacat                                                                              >  1:4212‑M1/1‑77 (MQ=255)

                                                                  atatTCCTTGGCTTGTTGAAGAATAATTGAAATGATATTAGTGATTCCACTGCTTTTTGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcagttcactactggaactgtaatcagaaaagatagacatgc                                                                            <  1:704269‑M1/143‑69 (MQ=255)

                                                                    aaTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactctaatcagaaaagatagacatgctt                                                                          >  1:548905‑M1/1‑73 (MQ=255)

                                                                     accctgTGCTTGCTGAATACTAAATGAAATGATATTATCAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAattataatcaattgttaacttattgtgcatttcactactggaactgtaatcagaaaagatagacatgctta                                                                         <  1:237663‑M1/141‑72 (MQ=255)

                                                                     aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctta                                                                         <  1:1010038‑M1/143‑72 (MQ=255)

                                                                      tCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGAGCTAAataataatcaattgttaaattattgtgcatttcacaactggaacagtaatcagtaaagatagacactcttag                                                                        >  1:606277‑M1/1‑71 (MQ=255)

                                                                         tGGGCTTGCTGAATAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcca                                                                     <  1:63188‑M1/143‑76 (MQ=255)

                                                                            gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatc                                                                  >  1:1212905‑M1/1‑65 (MQ=255)

                                                                             cTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatct                                                                 <  1:1243727‑M1/143‑80 (MQ=255)

                                                                                gCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaacttattgtgcatttcactactggcactgtaatcagaaaagataaacatgcttagccaatctcta                                                              >  2:632496‑M1/1‑61 (MQ=255)

                                                                                 cTGAAGAATAATTGAAATGATATTATTGATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctat                                                             <  2:500989‑M1/143‑84 (MQ=255)

                                                                                  tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatt                                                            >  2:655978‑M1/1‑59 (MQ=255)

                                                                                  tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatt                                                            <  2:675137‑M1/143‑85 (MQ=255)

                                                                                  tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagaaatgcttagccaatctctctt                                                            >  1:650148‑M1/1‑59 (MQ=255)

                                                                                    aagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggcattgtaatcagaaaagatagacatgcttagccaatctctatttg                                                          >  2:287893‑M1/1‑57 (MQ=255)

                                                                                    aagaaTAATTGAAATGATATTATTAATTCCACTGCCTGTGGTAGAGGAAAGTGCTAAataataatcaatagttaaattattgtgcatttcactactggaactgtaatcagaaaagagagacatgcgtagccagtctctatgtg                                                          >  2:254982‑M1/1‑57 (MQ=255)

                                                                                     agaaTAATTGAAATTATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga                                                         <  1:341649‑M1/143‑88 (MQ=255)

                                                                                     agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga                                                         <  1:1041763‑M1/143‑88 (MQ=255)

                                                                                      gtgtctgtcaaaagagattattAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgat                                                        <  1:1175093‑M1/134‑89 (MQ=255)

                                                                                          aatTGAAATGGTATTATTAATTCCCCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaa                                                    <  2:1252920‑M1/143‑93 (MQ=255)

                                                                                           atTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaat                                                   >  2:850441‑M1/1‑50 (MQ=255)

                                                                                                aaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctcaatttgattgaattgaaa                                              >  2:92662‑M1/1‑45 (MQ=255)

                                                                                                    atatTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatg                                          >  2:58866‑M1/1‑41 (MQ=255)

                                                                                                      attattAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtactccgaaaagatagacatgcttagccaatatctctttaattgaattgaaagaggtt                                        >  1:527225‑M1/1‑39 (MQ=255)

                                                                                                       ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       <  2:634454‑M1/143‑106 (MQ=255)

                                                                                                       ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       <  2:1087802‑M1/143‑106 (MQ=255)

                                                                                                       ttattaATCCCACTGCCTGTGGGAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       <  2:26063‑M1/143‑106 (MQ=255)

                                                                                                       gtattaaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       <  1:1292382‑M1/142‑106 (MQ=255)

                                                                                                          ttaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatcgccatgcttagccaatatctctttgattgaattgaaagatgtttgtt                                    <  2:953851‑M1/143‑109 (MQ=255)

                                                                                                          ttaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgtt                                    >  2:516023‑M1/1‑35 (MQ=255)

                                                                                                            aaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaa                                  <  2:323120‑M1/143‑111 (MQ=255)

                                                                                                            aaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaa                                  <  1:25606‑M1/143‑111 (MQ=255)

                                                                                                            aaTGCCACTGCCTTTGGTAGAGGAAAGTGCTAAataagaatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaa                                  <  1:167411‑M1/143‑111 (MQ=255)

                                                                                                             aTTCCACTGCTGTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaag                                 <  1:943976‑M1/143‑112 (MQ=255)

                                                                                                                ccACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattggattgacagatgttcgttacggca                              >  1:1200702‑M1/1‑29 (MQ=255)

                                                                                                                 cttttttgtttgtagaggaaagtGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcat                             <  1:1106815‑M1/132‑116 (MQ=255)

                                                                                                                 cACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaagacat                             >  1:1096553‑M1/1‑28 (MQ=255)

                                                                                                                 cACTGCCCTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcat                             <  2:1064002‑M1/143‑116 (MQ=255)

                                                                                                                    tGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatgga                          >  2:173103‑M1/1‑25 (MQ=255)

                                                                                                                    tGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacacgcttagccaaccactatttgattgaattgaaagatgttcgttcaggcatgga                          >  1:1189010‑M1/1‑25 (MQ=255)

                                                                                                                      ccTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatg                        >  2:129631‑M1/1‑23 (MQ=255)

                                                                                                                       cTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgc                       >  2:1156143‑M1/1‑22 (MQ=255)

                                                                                                                       cTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactagaactgtaataagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgc                       >  1:833604‑M1/1‑22 (MQ=255)

                                                                                                                             tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaggctc                 >  2:547773‑M1/1‑16 (MQ=255)

                                                                                                                                  gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagat            >  1:233243‑M1/1‑11 (MQ=255)

                                                                                                                                    aaGTGCTAAataataatcaattgttaaattgttgtggacaacactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattc          <  1:908310‑M1/143‑135 (MQ=255)

                                                                                                                                     aGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattct         >  1:772298‑M1/1‑8 (MQ=255)

                                                                                                                                     aGTGCTAAataacaatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatacaagctatagattct         <  2:1182332‑M1/143‑136 (MQ=255)

                                                                                                                                      gTGCTAAatcatagtcaattgttaaattattgtgcatttcactactggatctgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctg        <  1:268218‑M1/143‑137 (MQ=255)

                                                                                                                                         cTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgata     <  2:1212905‑M1/143‑140 (MQ=255)

                                                                                                                                          tAAataataattaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatccggtttgaaagccagtctctatttgattcaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatac    <  2:947003‑M1/143‑141 (MQ=255)

                                                                                                                                          tAAataataatcaattgttaaatttttgtggttgtaaatactaaaacgggaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatac    <  2:534879‑M1/143‑141 (MQ=255)

                                                                                                                                          tAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgataa    >  1:754275‑M1/1‑3 (MQ=255)

                                                                                                                                            aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaaactatagattctgatacgg  <  2:689663‑M1/143‑143 (MQ=255)

ATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  >  NC_000913/1299358‑1299640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`