mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 16 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4426579 = | 135 (1.490) | 6 (0.070) | 6/218 | NT | 4.9% | intergenic (+22/+49) | rplI/yjfZ | 50S ribosomal subunit protein L9/uncharacterized protein |
| ? | NC_000913 | 4426606 = | 112 (1.380) | intergenic (+49/+22) | rplI/yjfZ | 50S ribosomal subunit protein L9/uncharacterized protein | |||||
| * | ? | NC_000913 | 4384359 = | 89 (0.980) | 4 (0.050) | 4/236 | NT | 4.8% | coding (521/1503 nt) | yjeM | putative transporter |
| ? | NC_000913 | 4384374 = | 72 (0.820) | coding (536/1503 nt) | yjeM | putative transporter | |||||
| * | ? | NC_000913 | = 4241701 | 118 (1.300) | 4 (0.050) | 4/230 | NT | 3.3% | coding (554/1476 nt) | xylE | D‑xylose transporter |
| ? | NC_000913 | = 4241729 | 122 (1.430) | coding (526/1476 nt) | xylE | D‑xylose transporter | |||||
| * | ? | NC_000913 | 3955391 = | 97 (1.070) | 4 (0.050) | 4/232 | NT | 4.2% | coding (61/1545 nt) | ilvA | l‑threonine dehydratase, biosynthetic; also known as threonine deaminase |
| ? | NC_000913 | 3955421 = | 92 (1.070) | coding (91/1545 nt) | ilvA | l‑threonine dehydratase, biosynthetic; also known as threonine deaminase | |||||
| * | ? | NC_000913 | = 3507467 | 87 (0.960) | 4 (0.050) | 4/236 | NT | 4.4% | coding (235/354 nt) | yhfU | DUF2620 family protein |
| ? | NC_000913 | = 3507473 | 89 (1.010) | coding (229/354 nt) | yhfU | DUF2620 family protein | |||||
| * | ? | NC_000913 | = 3483914 | 87 (0.960) | 4 (0.050) | 4/226 | NT | 4.7% | coding (713/1023 nt) | yheT | UPF0017 family putative hydrolase |
| ? | NC_000913 | = 3483935 | 80 (0.950) | coding (734/1023 nt) | yheT | UPF0017 family putative hydrolase | |||||
| * | ? | NC_000913 | 3414180 = | 124 (1.370) | 4 (0.050) | 4/232 | NT | 3.3% | coding (317/1158 nt) | acrE | cytoplasmic membrane lipoprotein |
| ? | NC_000913 | 3414228 = | 118 (1.370) | coding (365/1158 nt) | acrE | cytoplasmic membrane lipoprotein | |||||
| * | ? | NC_000913 | 3326454 = | 117 (1.290) | 4 (0.050) | 4/232 | NT | 3.6% | coding (482/1935 nt) | ftsH | protease, ATP‑dependent zinc‑metallo |
| ? | NC_000913 | 3326486 = | 102 (1.180) | coding (450/1935 nt) | ftsH | protease, ATP‑dependent zinc‑metallo | |||||
| * | ? | NC_000913 | = 3229847 | 100 (1.100) | 3 (0.030) | 3/232 | NT | 3.1% | coding (960/2352 nt) | ygjK | alpha‑glucosidase |
| ? | NC_000913 | = 3229881 | 95 (1.100) | coding (994/2352 nt) | ygjK | alpha‑glucosidase | |||||
| * | ? | NC_000913 | 3090575 = | 111 (1.220) | 3 (0.030) | 3/234 | NT | 2.9% | coding (229/708 nt) | endA | DNA‑specific endonuclease I |
| ? | NC_000913 | 3090615 = | 93 (1.070) | coding (269/708 nt) | endA | DNA‑specific endonuclease I | |||||