| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,335,153 | Δ593 bp | [ymiA]–yciX | [ymiA], yciX | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1335153 | 1335745 | 593 | 53 [0] | [0] 51 | [ymiA]–yciX | [ymiA],yciX |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1335152 | 0 (0.000) | 51 (0.570) | 45/282 | 0.9 | 100% | coding (29/165 nt) | ymiA | uncharacterized protein |
| ? | NC_000913 | 1335746 = | 0 (0.000) | intergenic (+288/‑85) | yciX/acnA | uncharacterized protein/aconitate hydratase 1; aconitase A | |||||
CTGGATGGGCGCGTTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCA > NC_000913/1335601‑1335892 | aggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAAt > 5:336896‑M2/146‑149 (MQ=255) tgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagagatggcgattatatgagAAATCGTTACGCGATg > 8:37391‑M2/134‑149 (MQ=255) attcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTtgt < 5:248638‑M2/21‑1 (MQ=255) ttcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTtgtg < 5:210493‑M2/22‑1 (MQ=255) actggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAGTCGTTGCGGGAGGgttgtgtgtg > 6:265069‑M2/124‑146 (MQ=255) gagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatttgagAAATCGTTACGCGATGTTTGTGTTATCtt > 4:214791‑M2/120‑148 (MQ=255) gagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCtt < 6:336896‑M2/29‑1 (MQ=255) gacgattcgtaaactcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTaa < 7:198610‑M2/32‑1 (MQ=255) gattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAatat > 5:146695‑M2/115‑149 (MQ=255) gattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAatat > 8:37557‑M2/115‑149 (MQ=255) tcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCa > 8:348519‑M2/112‑149 (MQ=255) cgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCa < 1:382336‑M2/38‑1 (MQ=255) gtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGt < 3:222525‑M2/17‑1 (MQ=255) gtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGt > 4:222525‑M2/110‑126 (MQ=255) gtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCAcc > 8:195189‑M2/110‑149 (MQ=255) aaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCt > 5:297039‑M2/108‑149 (MQ=255) aattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCt < 7:195189‑M2/42‑1 (MQ=255) attcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGa < 5:265069‑M2/44‑1 (MQ=255) ttcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGaa < 7:348519‑M2/45‑1 (MQ=255) ttcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGaa < 5:298906‑M2/45‑1 (MQ=255) tttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacttcttgctgataagtgatggcgattatatgtgAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAg < 5:130243‑M2/54‑1 (MQ=255) tttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAg < 7:127414‑M2/54‑1 (MQ=255) agtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAc < 6:297039‑M2/65‑1 (MQ=255) tctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCt < 1:320964‑M2/68‑1 (MQ=255) taggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGt < 8:247223‑M2/70‑1 (MQ=255) taggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCa < 6:146695‑M2/72‑1 (MQ=255) aggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTTATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAt > 2:309340‑M2/76‑148 (MQ=255) gatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGAGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAtt > 1:105894‑M2/74‑147 (MQ=255) tcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGc > 7:174695‑M2/66‑149 (MQ=255) gtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgt > 4:57676‑M2/61‑149 (MQ=255) gattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgt > 4:88163‑M2/57‑148 (MQ=255) ttaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtc < 1:321407‑M2/90‑1 (MQ=255) ttaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtc > 2:321407‑M2/55‑144 (MQ=255) ttaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCaa > 2:14051‑M2/55‑149 (MQ=255) aatcgttcaacgtcttgctgatatgtgatggcgattatatgagATATCGTTTCGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCAGTCATTAAGGAGGAGCTATGTCGTCAACCCTACgag < 8:101530‑M2/104‑1 (MQ=255) aatcgttcaacctcttgctgataagtgatggcgattatatgagAAATCGTTACGCGAAGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGTAGCTATGTCGTCAACCCTACgag > 7:101530‑M2/44‑147 (MQ=255) ttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTa < 2:193723‑M2/86‑1 (MQ=255) aacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGt > 2:133490‑M2/36‑147 (MQ=255) acgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg < 1:133490‑M2/115‑1 (MQ=255) ttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTACACCATACGAGAAGCCAGTAAGGacac > 4:325445‑M2/30‑149 (MQ=255) gctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGt > 1:147597‑M2/28‑149 (MQ=255) tgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTg > 6:170717‑M2/26‑149 (MQ=255) tgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTg > 2:308652‑M2/26‑149 (MQ=255) ataagtgatggagattatatgatAAATCGTTACGCGATGTTTGTTTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTg < 2:105894‑M2/124‑1 (MQ=255) taagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAg < 7:37557‑M2/127‑1 (MQ=255) agtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGc < 3:88163‑M2/129‑1 (MQ=255) agtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGc > 4:75328‑M2/21‑149 (MQ=255) gatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCa < 1:309340‑M2/131‑1 (MQ=255) tatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACt < 1:308652‑M2/142‑1 (MQ=255) atgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTa > 1:344488‑M2/6‑149 (MQ=255) agAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTAGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGCTAAAACTtcccc > 4:57735‑M2/3‑148 (MQ=255) | CTGGATGGGCGCGTTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCA > NC_000913/1335601‑1335892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |