| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,335,153 | Δ593 bp | [ymiA]–yciX | [ymiA], yciX | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1335153 | 1335745 | 593 | 53 [0] | [0] 51 | [ymiA]–yciX | [ymiA],yciX |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1335152 | 0 (0.000) | 51 (0.570) | 45/282 | 0.9 | 100% | coding (29/165 nt) | ymiA | uncharacterized protein |
| ? | NC_000913 | 1335746 = | 0 (0.000) | intergenic (+288/‑85) | yciX/acnA | uncharacterized protein/aconitate hydratase 1; aconitase A | |||||
TTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCTGGCGGTTTTTCTTGGTTCTGCACTTTTCTGGGTGGTTGTCGCACTGCTGATTTGGAAAGTGTGGGGATAACTATGGTCGGT > NC_000913/1335004‑1335299 | tttCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAg < 8:360584/149‑1 (MQ=255)tttCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAg < 8:303042/149‑1 (MQ=255) aGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaat > 5:336896‑M1/1‑145 (MQ=255) tGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGAGATGGCGATTATATGAGaaatcgttacgcgatg > 8:37391‑M1/1‑133 (MQ=255) attCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgt < 5:248638‑M1/148‑22 (MQ=255) ttCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtg < 5:210493‑M1/148‑23 (MQ=255) aCTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaagtcgttgcgggagggttgtgtgtg > 6:265069‑M1/1‑123 (MQ=255) gagaCGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATTTGAGaaatcgttacgcgatgtttgtgttatctt > 4:214791‑M1/1‑119 (MQ=255) gagaCGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctt < 6:336896‑M1/148‑30 (MQ=255) gaCGATTCGTAAACTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaa < 7:198610‑M1/149‑33 (MQ=255) gATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatat > 5:146695‑M1/1‑114 (MQ=255) gATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatat > 8:37557‑M1/1‑114 (MQ=255) tCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattca > 8:348519‑M1/1‑111 (MQ=255) cGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattca < 1:382336‑M1/148‑39 (MQ=255) gTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcacc > 8:195189‑M1/1‑109 (MQ=255) gTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgt < 3:222525‑M1/126‑18 (MQ=255) gTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgt > 4:222525‑M1/1‑109 (MQ=255) aaaTTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccct > 5:297039‑M1/1‑107 (MQ=255) aaTTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccct < 7:195189‑M1/148‑43 (MQ=255) aTTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctga < 5:265069‑M1/149‑45 (MQ=255) ttCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaa < 7:348519‑M1/149‑46 (MQ=255) ttCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaa < 5:298906‑M1/149‑46 (MQ=255) tttttGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACTTCTTGCTGATAAGTGATGGCGATTATATGTGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcag < 5:130243‑M1/149‑55 (MQ=255) tttttGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcag < 7:127414‑M1/149‑55 (MQ=255) aGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaac < 6:297039‑M1/149‑66 (MQ=255) tCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccct < 1:320964‑M1/148‑69 (MQ=255) tAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtca < 6:146695‑M1/148‑73 (MQ=255) tAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgt < 8:247223‑M1/146‑71 (MQ=255) aGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatcttttatattcaccctgaagagaatcagggcttcgcaaccctgtcat > 2:309340‑M1/1‑75 (MQ=255) gATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgagatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcatt > 1:105894‑M1/1‑73 (MQ=255) tcATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagc > 7:174695‑M1/1‑65 (MQ=255) gTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgt > 4:57676‑M1/1‑60 (MQ=255) gATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgt > 4:88163‑M1/1‑56 (MQ=255) ttaattaCACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaa > 2:14051‑M1/1‑54 (MQ=255) ttaattaCACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtc > 2:321407‑M1/1‑54 (MQ=255) ttaattaCACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtc < 1:321407‑M1/144‑91 (MQ=255) aaTCGTTCAACGTCTTGCTGATATGTGATGGCGATTATATGAGatatcgtttcgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaacccagtcattaaggaggagctatgtcgtcaaccctacgag < 8:101530‑M1/147‑105 (MQ=255) aaTCGTTCAACCTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgaagtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggagtagctatgtcgtcaaccctacgag > 7:101530‑M1/1‑43 (MQ=255) ttCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagcta < 2:193723‑M1/124‑87 (MQ=255) aaCGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagt > 2:133490‑M1/1‑35 (MQ=255) aCGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaag < 1:133490‑M1/149‑116 (MQ=255) ttGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtacaccatacgagaagccagtaaggacac > 4:325445‑M1/1‑29 (MQ=255) gCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgt > 1:147597‑M1/1‑27 (MQ=255) tGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttg > 6:170717‑M1/1‑25 (MQ=255) tGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttg > 2:308652‑M1/1‑25 (MQ=255) aTAAGTGATGGAGATTATATGATaaatcgttacgcgatgtttgttttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttg < 2:105894‑M1/147‑125 (MQ=255) tAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcag < 7:37557‑M1/149‑128 (MQ=255) aGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggc > 4:75328‑M1/1‑20 (MQ=255) aGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggc < 3:88163‑M1/149‑130 (MQ=255) gATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggcca < 1:309340‑M1/148‑132 (MQ=255) tatGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaact < 1:308652‑M1/148‑143 (MQ=255) atGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaactta > 1:344488‑M1/1‑5 (MQ=255) agaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttagcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagctaaaacttcccc > 4:57735‑M1/1‑2 (MQ=255) | TTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCTGGCGGTTTTTCTTGGTTCTGCACTTTTCTGGGTGGTTGTCGCACTGCTGATTTGGAAAGTGTGGGGATAACTATGGTCGGT > NC_000913/1335004‑1335299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |