Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
19 2 3
20 2 3
21 2 3
22 2 3
23 2 3
24 2 3
7 13 19

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 16 26
Multiple Base Substitutions 0 0
Deletions 9 27
Insertions 2 2
Mobile Element Insertions 2 2
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 29 57

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 7 0 64.3 2406472 97.5% 2346310 128.3
A19 F16 I1 R1 7 0 86.6 3195806 97.7% 3122302 129.6
A19 F92 I0 R1 87 0 49.2 1862594 97.5% 1816029 127.5
A19 F92 I4 R1 9 0 65.5 2439290 97.6% 2380747 128.3
A20 F16 I1 R1 6 0 78.8 2934264 97.5% 2860907 128.7
A20 F88 I0 R1 81 0 74.3 2801204 97.7% 2736776 129.0
A20 F88 I2 R1 7 0 63.7 2449914 97.7% 2393565 129.2
A21 F16 I1 R1 6 0 65.7 2454036 97.3% 2387777 128.9
A21 F89 I0 R1 71 0 47.8 1779734 97.8% 1740579 129.6
A21 F89 I5 R1 8 0 70.2 2626900 97.4% 2558600 128.7
A22 F17 I1 R1 6 0 54.5 2020690 97.7% 1974214 129.3
A22 F92 I0 R1 66 0 50.7 1887720 97.7% 1844302 129.1
A22 F92 I3 R1 12 0 68.3 2524138 97.7% 2466082 129.5
A23 F17 I1 R1 6 0 63.8 2352448 97.7% 2298341 129.7
A23 F97 I0 R1 55 0 35.3 1440904 97.5% 1404881 127.4
A23 F97 I4 R1 8 0 55.5 2211128 97.4% 2153638 128.8
A24 F17 I1 R1 7 0 61.2 2280358 97.6% 2225629 128.9
A24 F98 I0 R1 56 0 42.6 1747010 97.6% 1705081 128.6
A24 F98 I2 R1 6 0 66.3 2675032 97.5% 2608156 129.6

Mutation Needle Plot

Mutation Targets

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