Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 2 3
2 2 3
3 2 3
4 2 3
5 2 3
6 2 3
7 13 19

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 13 21
Multiple Base Substitutions 0 0
Deletions 4 23
Insertions 0 0
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 17 44

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 6 0 40.9 1531370 97.6% 1494617 128.0
A1 F14 I1 R1 6 0 66.8 2478372 97.6% 2418891 129.2
A1 F61 I0 R1 75 0 69.6 2573034 97.6% 2511281 130.0
A1 F61 I6 R1 8 0 54.3 2014502 97.7% 1968168 128.8
A2 F14 I1 R1 8 0 66.6 2485394 97.5% 2423259 128.3
A2 F60 I0 R1 89 0 64.7 2394170 97.5% 2334315 129.9
A2 F60 I7 R1 9 0 45.4 1691782 97.5% 1649487 128.2
A3 F14 I1 R1 7 0 64.3 2371708 97.6% 2314787 129.5
A3 F61 I0 R1 83 0 70.0 2633000 97.6% 2569808 128.2
A3 F61 I4 R1 7 0 46.5 1735688 97.6% 1694031 128.7
A4 F14 I1 R1 6 0 47.6 1769800 97.5% 1725555 128.8
A4 F60 I0 R1 103 0 56.5 2128644 97.5% 2075427 128.4
A4 F60 I2 R1 5 0 67.9 2519250 97.7% 2461307 128.9
A5 F14 I1 R1 8 0 56.4 2094260 97.6% 2043997 128.8
A5 F62 I0 R1 58 0 37.0 1383148 97.6% 1349952 128.5
A5 F62 I7 R1 7 0 45.0 1670770 97.6% 1630671 129.2
A6 F14 I1 R1 7 0 72.4 2673066 97.6% 2608912 129.6
A6 F60 I0 R1 63 0 54.7 2074496 97.4% 2020559 127.9
A6 F60 I3 R1 7 0 52.9 1999662 97.6% 1951670 128.9

Mutation Needle Plot

Mutation Targets

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