Frequency Filtering Thresholds

Minimum Cutoff:       Maximum Cutoff:

Ignored Genes

Enter gene(s) separated by ',' ex: tpoB,folD

Ignored Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details
1124810 1744473 SNP C→T
apt
Adenine phosphoribosyltransferase A67T (GCT→ACT)
1124862 2337959 SNP C→T
adhR, USA300HOU_RS11940
HTH-type transcriptional regulator AdhR/Hyaluronate lyase intergenic (‑125/‑283)
1125089 707909 SNP A→T
znuC_1
High-affinity zinc uptake system ATP-binding protein ZnuC M1M (TTG→ATG) †
1125852 478502 SNP C→A
nuoL
NADH-quinone oxidoreductase subunit L D342E (GAC→GAA)
1125853 584121 SNP G→T
rplA, rplJ
50S ribosomal protein L1/50S ribosomal protein L10 intergenic (+205/‑67)
1125857 973213 SNP C→A
yitU_1
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU E175* (GAG→TAG)
1125858 1002200 SNP T→G
mecA
Adapter protein MecA 1 M173R (ATG→AGG)
1125859 1105994 SNP T→C
pdhD
Dihydrolipoyl dehydrogenase T12T (ACT→ACC)
1125860 1196508 SNP C→A
ftsZ
Cell division protein FtsZ S338Y (TCT→TAT)
1125862 1539250 SNP C→G
aroC, USA300HOU_RS07505
Chorismate synthase/hypothetical protein intergenic (‑349/+37)
1125866 2455692 DEL Δ1 bp
lyrA
Lysostaphin resistance protein A coding (1210/1260 nt)
1125867 2455698 SUB 2 bp→AT
lyrA
Lysostaphin resistance protein A coding (1216‑1217/1260 nt)

Starting Strain Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details