BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	165253 =	1275 (0.600)	616 (0.330)	140/220	11.6	37.1%	intergenic (+217/‑325)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
*	?	CP016816	= 165249	980 (0.530)	616 (0.330)	140/220	11.6	37.1%	intergenic (+213/‑329)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1688 total aligned reads displayed.

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAGAAAGGAAAAAATAT‑TGTTAAAAGTAATACTAAAATTATTTAATGTTAATT  >  CP016816/165122‑165372

gATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGc                                                                                                                                    >  2:3614874/1‑128 (MQ=255)

     tatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑ttttt                                                                                                                             >  2:3897877/1‑128 (MQ=255)

     tatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTATTAAAAAATTAATTTGAACTAGTAAAAAATAGC‑‑ttttt                                                                                                                             >  2:707015/1‑128 (MQ=255)

      atTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGA‑‑tttttt                                                                                                                            >  2:3066615/1‑128 (MQ=255)

       tttatttttattAATTTTTCTCACTTGTATTAATTATTAATAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑ttttttt                                                                                                                           <  2:3402510/128‑1 (MQ=255)

        ttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttttttt                                                                                                                          >  2:1162816/1‑128 (MQ=255)

        ttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttttttt                                                                                                                          >  1:2173256/1‑128 (MQ=255)

          tttttCATTAATTTTTAGCAATTTTATTAATTAGTAATAAAATAAAAATATTATCTTTTTATTTATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAACTTTTAAAAAATAGC‑‑tttttttttt                                                                                                                        <  1:4579488/126‑1 (MQ=255)

           gTTTCATTTATTTATCGCACTTTTTTGAATTTGTAATACAATAAAAATTTTATCTTTTTATATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATAGC‑‑ttttttttttt                                                                                                                       <  1:2971687/128‑1 (MQ=255)

            tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttttttttttt                                                                                                                      >  1:560123/1‑128 (MQ=255)

            tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttttttttttt                                                                                                                      >  1:3168731/1‑128 (MQ=255)

            ttccATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAATCTATTAACTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑ttttaatttttt                                                                                                                      >  1:1678025/4‑128 (MQ=255)

             ttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑ttttttttttttt                                                                                                                     >  2:605003/1‑128 (MQ=255)

              tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttttttttttttt                                                                                                                    >  1:3728677/1‑128 (MQ=255)

              tCATTAATTTATCGCACTTGTATGAAGTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttatttttttttt                                                                                                                    >  2:505446/1‑128 (MQ=255)

               cATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑ttttttttttttttt                                                                                                                   >  1:324582/1‑128 (MQ=255)

                      ttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGA‑‑ttttttttttttttttttaaat                                                                                                            >  2:1435321/1‑124 (MQ=255)

                       tATCTCACTTGTATGAAATAGTAAGAAAATAAAACTATTATATTTTTATATATTTTTTTTATATGCAAATTTTTAAAAAAATAATTTGAACTTGTAAAAAATATC‑‑ttttttttttttttttataatgg                                                                                                           <  1:1747481/128‑8 (MQ=255)

                        aTCGCACTTGTATGAATTAGTAAGAAACTAAAACTTTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttttttttttttttttaataata                                                                                                          >  1:900391/1‑121 (MQ=255)

                         tCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAGATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑ttttttttttttttttaaatttaat                                                                                                         >  1:308713/1‑119 (MQ=255)

                         tCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑ttttttttttttttttttaaatttt                                                                                                         >  1:3858847/1‑121 (MQ=255)

                          cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAATgaa                                                                                                       >  2:2092406/1‑126 (MQ=255)

                          cGCAATTGTATTAATTATTAATAAAATAAAAATATTATCTTTTTATTAATTTTTTTTAAAAGCAAATTTTTAAAAAATTTATTTGAAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTATAATgg                                                                                                        <  1:3588305/128‑1 (MQ=255)

                            cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTtataattgatat                                                                                                      >  2:4367323/1‑120 (MQ=255)

                             aCTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAATgataat                                                                                                    >  1:4127100/1‑123 (MQ=255)

                              cttcaaTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATAAGCAAATTTTTAAAAAATTATTTTGAACTTGTAAAAAAAAG‑‑‑ATTTTTTTTTTTTTTTTTTATAATAGatatt                                                                                                   >  1:2040944/6‑127 (MQ=255)

                               ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTT‑TAATTTAAata‑t                                                                                                 >  2:3743015/1‑128 (MQ=255)

                                  tATTAATTAGTAATAAACTTAAAATATATTGATTTTATATATTTTTTTTTAATGCAAATTTTTAAAAAATTTATTTTTACTTGTAAAAAATA‑‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAAtt                                                                                           <  1:4161104/128‑1 (MQ=255)

                                  tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATTGAAATA‑T‑AAAt                                                                                            >  2:1506070/1‑128 (MQ=255)

                                   aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTTTaaatgtaaatttta                                                                                               >  1:1052627/1‑116 (MQ=255)

                                     gAATTAGTAATAAACTAAAACTATTATCTTTTTATATATTTTTTGTATATGCAAATTTTTAAAAAATTAAATTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTa                                                                                        <  2:2636298/128‑1 (MQ=255)

                                       ttaattaataaATTAAAACTATTATCTTTTTAGATATTTTTTGTATATTCAAATTTTTAAAAAAATAATTTGAACTTGTAAAAAATATC‑‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTa                                                                                        <  2:3197862/123‑1 (MQ=255)

                                       attattAATAAAATAAAAATTTTTTATTTTTTTATATTTTTTTTATTTTTAAATTTTTAAAAAATTTATTTTAAATTTTAAAAAATA‑T‑‑GTTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTa                                                                                        <  2:1666653/128‑1 (MQ=255)

                                        ttAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTATTTTTTTTTTTTTTTA‑AATTGAAATATT‑AAATTTTAg                                                                                       >  1:2562839/1‑128 (MQ=255)

                                         ttttaataaAATAAAATTATTATTTTTTTTTTTTTTTTTTTTATATTCAAATTTTTAAAAAATTAATTTTAAATTTTTAAAAATA‑‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTa                                                                                    <  2:3689813/125‑1 (MQ=255)

                                         tatttaGATACTATAAATATTATCTTTTTATTTATTTTTTTTATAAGTAAATATTTAAATAATTAATTTTTTATTTTAAAAAATAG‑‑‑TTTTTTTTTTTTTTTTTTTATATTTGATATA‑T‑AAATTTTAgg                                                                                      <  1:2361330/123‑1 (MQ=255)

                                         tattaataaACTAAAAATATTATATTTTTATATATTTTTTTTATATTCAAATTTTTAAAAAATTTATTTTAACTTGTAAAAAATA‑‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTa                                                                                    <  2:4279927/125‑1 (MQ=255)

                                            ttataaaataaaaataTTATATTTTTTTATTTTTTTTTTATATTTAAATTTTTATAAAATTAAATTTTAATTTTTAAAAATA‑‑‑‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATA‑T‑AAATTTTAGGTAttt                                                                                 <  1:787788/124‑1 (MQ=255)

                                             aaGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTTATAATTAAAATA‑T‑AAATTTAatttattt                                                                                 >  2:1239282/1‑128 (MQ=255)

                                               gAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATATTTAAAAT‑‑T‑ATATTTTATGTATTttg                                                                               >  1:2424483/1‑128 (MQ=255)

                                                aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAATAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATA‑T‑AAATTTTAGGTAtttttt                                                                              >  1:3507162/1‑126 (MQ=255)

                                                  actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTAAAAAGTAAAAA‑T‑AAATTTTTTTTATtttttt                                                                             >  2:1061466/1‑128 (MQ=255)

                                                   ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATA‑T‑AAATTTTAGTTATttttttt                                                                            >  2:3146621/1‑127 (MQ=255)

                                                    taaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTT‑‑TAATTGTAATA‑A‑AAATTTTATTTATtttttttga                                                                          >  1:3958631/1‑125 (MQ=255)

                                                    taaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTATTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGTTATttttttta                                                                           >  2:2277567/1‑126 (MQ=255)

                                                      aaaataTTATTTTTTTAGATATTTTTTGTTTATGTAAATTTTTAAAAAATTAATTTGAAATTTTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTaa                                                                      <  1:687642/128‑1 (MQ=255)

                                                       aaatattatATTTTTATATTTTTTTTTTATATTAAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTaa                                                                      <  2:2190935/125‑1 (MQ=255)

                                                         ctaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAATTAAAATA‑T‑AAAATTTATTTATTTTTTTTT‑ATaat                                                                     >  2:1999641/1‑127 (MQ=255)

                                                          tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTTATAATGTAAAAA‑T‑AAATTTTAGTTATttttttttaaa                                                                        >  2:347391/1‑123 (MQ=255)

                                                          tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATTG‑AATA‑TAAAATTTTAGTTATTTTTTTTT‑ATAATTa                                                                   >  2:4069790/1‑128 (MQ=255)

                                                          tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATTAAAATA‑T‑AAATTTTAGTTATttttttataaaatta                                                                    >  2:2712321/1‑119 (MQ=255)

                                                          tattatCTTTTTAGATATTTTTTGTATAAGCAAATCTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATATTGTAAATA‑T‑AAAATTTATTTATTTTGTTTT‑ATAATTa                                                                   >  1:1529141/1‑128 (MQ=255)

                                                            ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑GTTTTTTTTTTTTTTTTTTAT‑‑TGGATATA‑T‑AAATTTTATGTNTTTTTTTGT‑TTatttttg                                                                 >  1:3649628/1‑122 (MQ=255)

                                                             tatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATA‑T‑AAATTTTATGTATTTTTTTTT‑ATAAgagatcg                                                               >  2:4138960/1‑122 (MQ=255)

                                                              atCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATA‑A‑AAATTTTAGTTATTTTTTTTT‑ATAATTaaata                                                               >  2:3562974/1‑124 (MQ=255)

                                                               tCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATA‑T‑AAATTTTAGTTATTTTTTTTT‑ATAATTaaata                                                               >  1:483702/1‑124 (MQ=255)

                                                                cTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTATTTTTTTTTAAAAAAGAAAATA‑T‑AAATATTACTTATTTTGTTTA‑ATAAGAAT‑CTaaa                                                            >  2:934688/1‑128 (MQ=255)

                                                                cTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTaaaa                                                           >  1:125944/1‑128 (MQ=255)

                                                                 tttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATA‑T‑AAATTTTATTTATTTTTTTTT‑ATAATTAT‑CTaaaa                                                           >  2:4515425/1‑128 (MQ=255)

                                                                  ttttATATATTTTTTGTATTTTCAAATTTTTAAAAAATTTATTTTAAATTGTTAAAAAT‑‑T‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTA‑TTTGTTGT‑CTAAGTAT‑CTaaaaaa                                                         <  2:829173/128‑1 (MQ=255)

                                                                    ttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAAAA‑T‑AAATTTTAGGTATTTTTTTTA‑ATAATTAT‑ATaaaaaaa                                                        >  1:1436665/1‑128 (MQ=255)

                                                                    tatattatTTTTTTTA‑ATTTAAATTTTTATAAAATTAATTTGTAATTTTTAAAAA‑A‑‑‑‑TTCTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATa                                                      <  1:449546/123‑1 (MQ=255)

                                                                     tAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATA‑T‑AAATTTTTGTTATTTTTTTTT‑CTAATATT‑ATAAAAAAAt                                                       >  2:2934224/1‑128 (MQ=255)

                                                                      ttttatTTTTTTTTTATTAAAATTTTTTAAAAATTAAATTTTAATTTTTAAAAATA‑‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATa                                                      <  2:328171/125‑1 (MQ=255)

                                                                      ttttatTTTTTTTATATTAAAATTTTTAAAAAAATAATTTTAACTTTTAAAAAATA‑‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAg                                                     <  1:1000910/125‑1 (MQ=255)

                                                                       ttttttttttGTTTATGAAATTTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAg                                                     <  2:2841148/124‑1 (MQ=255)

                                                                        atatTTTTTGTATATGCAAATTTTTAAAAAATTAAATTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGTTAATA‑A‑AAATTTTAGTTATTTTTTTTT‑CTAATTAT‑CAAAAAAAATata                                                    >  1:984857/1‑126 (MQ=255)

                                                                            tttttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTAAAATGTAAATA‑T‑AAATTTTATTTTTTTTTTTTT‑CTAAGTAT‑ATAAAAAAATATAAAgt                                                >  1:3794286/1‑127 (MQ=255)

                                                                              tttttatattataaTTTTTAAAAAATTAATTTTAATTTGTAAAAAAAATC‑‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAGAAAGGa                                               <  1:1159144/116‑1 (MQ=255)

                                                                               ttttataTGTAAATTTTTAATAAATTAATTTGAAATTTTTAAAAATAGC‑‑‑‑TTTTTATTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAGAAAGGaaa                                             <  2:4200304/125‑1 (MQ=255)

                                                                                tGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATATTTAAAATT‑A‑AAATTTTATTTTTTTTTTTTT‑ATAATTAT‑ATAAAAAAATATAAATTaaaa                                            >  2:3821796/1‑128 (MQ=255)

                                                                                   tattttaaaTTTTTTAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAGAAAGGAAAAAat                                         <  2:458804/122‑1 (MQ=255)

                                                                                   atatGTAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATAG‑‑‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAGAAAGGAAAAAat                                         <  2:2511665/128‑1 (MQ=255)

                                                                                   atatGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATTTAAATA‑T‑AAATTTTAGGTTTTTTTTTTT‑ATAAGTTT‑AAAAAAAAATATAAAGTAAAAAatt                                        >  2:2348633/1‑127 (MQ=255)

                                                                                    tatGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTAAAAAGAAAAAA‑A‑AAATTTAATAATTTTTTTTTT‑ATAATTAA‑ATAAAAAAAAAAAAATGAAAAAat                                         >  1:1906654/1‑128 (MQ=255)

                                                                                     atGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATA‑T‑AAATTTAATTTATTTTTTTTT‑ATAATTAT‑ATAAAAAAATAaaaattaaaaatta                                        >  2:185030/1‑128 (MQ=255)

                                                                                     atGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATA‑T‑AAATTTTAGTTATTTTTTTTT‑ATAATTAT‑ATAAAAAAATATAAAGTATAAAatat                                       >  2:1582468/1‑128 (MQ=255)

                                                                                     atGCAAATTTTCAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTAAAATGAAAATA‑T‑AAATTTTAGTTTTTTTGTTGG‑ATAATTAT‑CTAAAAAATTATATATAAAAAAata                                        >  1:2492393/1‑128 (MQ=255)

                                                                                      tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATA‑A‑AAATTTTAGTTATTTTGTTTA‑ATAATTAA‑CAAAAAAAATAAAAAATAAAAAaaatat                                     >  1:2865890/1‑126 (MQ=255)

                                                                                        cAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTATTTTTTTTTTTTTA‑AATTTAAATA‑T‑AAATTTTATTTTTTTTGTTTT‑GTAATTAA‑AAAAAAAAATAAAAATAAAAAAATAt‑ttt                                   >  1:4263501/1‑126 (MQ=255)

                                                                                               ttaaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAAT‑ATGAAAATA‑T‑AAATTTAAGTTATTTTTTTTT‑AATAATTT‑ATAAAAAAATATAAAGG‑AAAAATATATGTTaaaatt                            >  1:1375685/3‑126 (MQ=255)

                                                                                               ttaaaaaaTTAA‑TTGAAATTTTTAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAGAAAGGAAAAAATAT‑TGTTAAAAGTa                           <  1:2757811/126‑1 (MQ=255)

                                                                                                taaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATA‑T‑AAATTTTAGGTATTTTTTTGG‑ATAAGTAT‑TTAAAAAAATTAAAATGAAAAAATTT‑TTTTAAAAGTa                           >  2:2578992/2‑128 (MQ=255)

                                                                                                 aaaaaaTTAATATGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTTAAATATAAAAA‑T‑AATATTTAGGTAATTTTTTGT‑ATAAGAAA‑ATAAAAATAAAAAAAATATAAATTAT‑TTATaaaaat                            >  2:1294462/1‑126 (MQ=255)

                                                                                                   aaaattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTATATTGTAAATA‑T‑AAATTTTATGTATTTTGTTGT‑CTAATTAT‑ATAAAAAAATATAAAGTAAAAAATAT‑TTTTTAAATTaa                          >  2:3991434/3‑128 (MQ=255)

                                                                                                    aaattaattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAAAA‑A‑AAATTTTTGTTATTTTTTTTTAAAAATTAA‑AAAAAAAAATA‑AAATGAAAAAAAAT‑TTTTAAAAataataa                       >  1:4039191/2‑127 (MQ=255)

                                                                                                      attaattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTTGTTTTTTTTTTTT‑AT‑ATTATATTAAAAAAATATAATGTAAAAAATTT‑TTTTAAAATTaaaaata                     >  2:1360523/1‑123 (MQ=255)

                                                                                                       ttaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATATTTTAAAAA‑T‑AAATTTTTTGTTTTTTTTTTT‑ATTTTTTT‑ATAAAAAATTAAAAAGTAAAAAATAT‑TTTTATAATTTataata                     >  2:3331146/1‑128 (MQ=255)

                                                                                                       ttaattTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATATAAAGGAAAAAATAT‑TTTTAAATGTAATAATaaa                   >  2:1919988/1‑128 (MQ=255)

                                                                                                       ttaattTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGTTATTTTGTTTT‑CTATTTTT‑ATAAAAAAATAAAATGGAAAAAATAT‑TTTTAAAAGTAATACTaaa                   >  2:1738956/1‑128 (MQ=255)

                                                                                                        taattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTAAATTGTAAATA‑T‑AAATTTTAGTTATTTTTTTTT‑TTATTTTT‑AAAAAAAAATATAAAGTAAAAAATAT‑AGTTAAATATAAAACTaaa                   >  1:3348065/1‑128 (MQ=255)

                                                                                                         aattTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAGAAAGGAAAAAATAT‑TGTTAAAAGTAATACTAAAat                 <  1:4401289/128‑1 (MQ=255)

                                                                                                          attTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATA‑A‑AAATTTTTGTTTTTTTTTTTT‑ATAAATAA‑ATAAAAAAAAAAAAATTAAAAAATAA‑TTTTAAAATTAATAaaaaaa                  >  1:2626034/1‑128 (MQ=255)

                                                                                                          atattaaattttAAAAAAAAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAGAAAGGAAAAAATAT‑TGTTAAAAGTAATACTAAAat                 <  2:4453859/117‑1 (MQ=255)

                                                                                                              gAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATATTGTAAATA‑T‑AATTTTTAGGTATTTATTTTT‑ATAATTAT‑ATAAAAAAATAGAAAGAAAAAAATAT‑TTTTAAAATTATTAAAAAAattttt             >  1:4329264/1‑128 (MQ=255)

                                                                                                                aCTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAAAATGAAAAAA‑T‑AAATTTTAGTTATTTTTTTGA‑AAAATAAA‑AAAAAAAAATAAAAAATAAAAAATAT‑TTTTAAAATTATTAAAAAAATTATTTa           >  1:2258255/1‑128 (MQ=255)

                                                                                                                  ttGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTA‑AATGTAAATA‑T‑AATTTTTTTGTTTTTTTTTTT‑ATAATTTT‑ATAAAAAATTATAATGTAATAAATTT‑TTTTTAATTTAATAATAAATTTTTTTAAt         >  2:556824/1‑128 (MQ=255)

                                                                                                                   tGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTAT‑‑TGTAAATA‑A‑AAATTTTAGTTATTTTGTTTT‑AAAATTAT‑ATAAAAAAATATAAATGAAAAAATAT‑TGTTAAAATTAAAAATAAAATTATTTAAtt        >  1:1611686/1‑127 (MQ=255)

                                                                                                                   tGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAATTAAAAAA‑A‑AAATTTTTGTTTTTTTTTTTT‑AAAATTAT‑AAAAAAAAAAAAAAATAAAAAAATTT‑TTTTAAATATAATAAAAAATTTTTTTAAt         >  1:1811184/1‑128 (MQ=255)

                                                                                                                        aaaaTAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATA‑A‑AAATTTTAGGTATTTTGTTGT‑ATAATTAT‑ATAAAAAAATTAAAATTAAAAAAATT‑TTTTAAAATTTATAATAAAATATTTAAATTttaat   >  2:2414107/1‑128 (MQ=255)

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATA‑T‑AAATTTTAGGTATTTTGTTGT‑CTAAGTAT‑CTAAAAAAATAGAAAGGAAAAAATAT‑TGTTAAAAGTAATACTAAAATTATTTAATGTTAATT  >  CP016816/165122‑165372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.