New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =1275 (0.600)616 (0.330) 140/220 11.6 37.1% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 980 (0.530)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1821 total aligned reads displayed.

AATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165125‑165380
                                                                                                                                 |                                                                                                                                 
 atatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTAGCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑tttt                                                                                                                                   >  1:2904295/1‑128 (MQ=255)
  tatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTATTAAAAAATTAATTTGAACTAGTAAAAAATAGC‑ttttt                                                                                                                                  >  2:707015/1‑128 (MQ=255)
   atTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGA‑tttttt                                                                                                                                 >  2:3066615/1‑128 (MQ=255)
      taatttAATTAATTTATCGCAATTTTATGAAATACTAAAAAAAAAAAAAAATTAAATTTTTATATATTTTTTTTAAATTCAAATTTTTAAAAAAATAATTTGAACTTGTAAAAAAAAGC‑ttttttttt                                                                                                                              <  1:4131023/125‑1 (MQ=255)
        gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttt                                                                                                                            >  1:3949669/1‑128 (MQ=255)
        gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATATTTAAAAAATTAATTTGAACTTGTAAATAATATC‑ttttttttttt                                                                                                                            >  1:1361150/1‑128 (MQ=255)
         tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttattttt                                                                                                                           >  1:233460/1‑128 (MQ=255)
              ttAATTTATAGCACTTTTATTAATTATTAATAAAATAAAAATATTATATTTTTAGATATTTTTTGTATATTCAAATTTTTAAAAAAATAATTTTAACTTTTTAAAAAAACC‑tttttttttttttttat                                                                                                                      <  2:4316357/128‑3 (MQ=255)
               tAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttatttttttat                                                                                                                     >  2:1233094/1‑126 (MQ=255)
                aaTTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttttat                                                                                                                    >  2:1505522/1‑126 (MQ=255)
                  tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACATGTAAAAAATAGC‑ttttttttttttttttataat                                                                                                                  >  1:3102580/1‑123 (MQ=255)
                     atacgaCTTTTATTAATTATTAACAAAATAAAACAATTATTTTTTTATATATTTTTTTTATATTCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAAAACC‑TTTTTTTTTTTTTTTTtataatgg                                                                                                               <  2:2193341/123‑5 (MQ=255)
                       cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttttttttttatatttta                                                                                                             >  1:3640443/1‑120 (MQ=255)
                        gtaatttttttaaTTATTAATAAAATAAAAATATTTTATTTTTATATTTTTTTTTTTTATTCAAATTTTTAAAAAAATAATTTTAACTTTTAAAAAATATCTTTTTTTTTTTTTTTTTTTTATAATgg                                                                                                             <  1:2211039/117‑1 (MQ=255)
                          aCTTTTATGTATTATTAATAAACTAAAACTATTATCTTTTTATATTTTTTTTTTATATGCAAATTTTTAAAAAATTAATTTTTACTTTTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAAtata                                                                                                      <  2:1725420/128‑1 (MQ=255)
                             tgttttaaTTATTAATAAACTAAAACTATTATCTTTTTATATATTTTTTGTATATTCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATaa                                                                                                     <  2:404066/122‑1 (MQ=255)
                               ttttaaTTATTAATAAACTAAAACTATTATCTTTTTATTTATTTTTTGTATATTCAAATTTTTAAAAAATTAATTTTAAATTGTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                  <  1:1424886/124‑1 (MQ=255)
                               tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATaaa                                                                                                    >  2:2280530/1‑128 (MQ=255)
                                aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTTTaaatgtaaatttta                                                                                                    >  1:1052627/1‑116 (MQ=255)
                                aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGAAATTATAAAttt                                                                                                 >  2:546444/1‑128 (MQ=255)
                                   aaTTATTAACAAACTAAAATATTTAACTTTTTATATATTTTTTTTTTAATCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAg                                                                                              <  1:1593461/128‑1 (MQ=255)
                                    attattAATAAAAAAAAAATATTATCTTTTTATAATTTTTTTTTAAATTCAAATTTTTAAAAAATTAATTTGTAATTGTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTa                                                                                               <  1:2594622/128‑1 (MQ=255)
                                      ttttaatcaaaaaaaaataTTATATTTTTAGAAATTTTTTGTTAATGCAAATTTTTAAAAAAATAAATTTCACTTTTTAAAAATA‑‑‑‑TGTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTa                                                                                           <  1:252931/116‑1 (MQ=255)
                                      tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑ATTTAAATATAAATTTTATGt                                                                                            >  1:3342702/1‑128 (MQ=255)
                                      tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATGt                                                                                            >  1:2149912/1‑128 (MQ=255)
                                       ttttataaaataaaaataTTATTTTTTTTTTTATTTTTTTTTTTTTTAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                            <  1:1162816/122‑1 (MQ=255)
                                       aGTAAGAAACTAAAACTATTTTCTTTTTATTTATTTTTTTTATATTCAAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTa                                                                                           <  2:4421612/128‑1 (MQ=255)
                                       aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTATAATTAAAATATAAAttttta                                                                                              >  1:3774711/1‑126 (MQ=255)
                                       aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTGaaatttaaatttaatgaa                                                                                           >  2:4242277/1‑122 (MQ=255)
                                        ttaataaAATAAAAATATTATATTTTTTTATATTTTTTGTTTATGCAAATTTTTAAAAAATTAATTTGAAATTGTAAAAAATAG‑‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                          <  2:3841562/127‑1 (MQ=255)
                                        gTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTA‑AATTGAAATATAAAtttttagtaatt                                                                                        >  1:1656477/1‑120 (MQ=255)
                                          aaGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATAAATATTTTatttttt                                                                                         >  2:2414996/1‑122 (MQ=255)
                                             aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTAAAATATAATTTTTatttttttttt                                                                                     >  2:4182812/1‑118 (MQ=255)
                                              aactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATAAAAATTTTAGTTATtttttt                                                                                    >  2:2109275/1‑128 (MQ=255)
                                                ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAAATTTTAAAAATAAATTTAATTTATttttttt                                                                                   >  2:1292588/1‑127 (MQ=255)
                                                   aaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTATTTTTATTTTTTAAAATTGAAATATAAAATTTAGTTATtttttttataa                                                                               >  2:2017399/1‑123 (MQ=255)
                                                   aaaataTTTTATTTTTTTATTTTTTTTTTAAATTTAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTa                                                                              <  1:325949/128‑1 (MQ=255)
                                                   aaaataTTATTTTTTTAGATATTTTTTGTTTATGTAAATTTTTAAAAAATTAATTTGAAATTTTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTaa                                                                             <  1:687642/128‑1 (MQ=255)
                                                    aactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTCGAACTTGTAAAAATTAGC‑‑‑TTTTTTTTTTATTTTTTATATTGGAAATAAAAAATTTATGTATTTTTTTTT‑CTaa                                                                             >  2:1581553/1‑128 (MQ=255)
                                                    aactaTTATATTTTTATATATTTTTTGTATATTCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑‑‑TCATTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTaa                                                                             <  2:3572402/128‑1 (MQ=255)
                                                       ttttatTTTTTTATATTTTTTTTGTATATGAAAATTTTTAAAAAATTAATTTTAAATTGTAAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATGTAAATTTTAGGTATTTTGTTGT‑CTAAGt                                                                           <  2:2841946/126‑1 (MQ=255)
                                                       tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTAAAATATAAATTTTAGTTATttttttataaaatta                                                                           >  2:2712321/1‑119 (MQ=255)
                                                       tattatCTTTTTAGATATTTTTTGTAAATGCAAAATTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTATTTTTTTATATAAATGAAATATATATTTTATTTTTTtttttgacatattat                                                                          >  2:2517633/1‑119 (MQ=255)
                                                        attattTTTTTATTTTATTTTTTTATTTTTAAATTTTTAAAAAATTAATTTTTAATTTTTAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTAt                                                                         <  2:115546/128‑1 (MQ=255)
                                                         ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAATTATATTTTAGGTTTTTTGTTGT‑ATAAGttt                                                                         >  1:4325364/1‑126 (MQ=255)
                                                         ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTAAAATATAAATTTAATTTATTTTTTTTT‑ATAATTAta                                                                        >  2:3272443/1‑127 (MQ=255)
                                                          tatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATATGGAAAATATAATTTTTAGTTATTTTTTTGA‑ATAATTATca                                                                       >  1:884391/1‑127 (MQ=255)
                                                          tatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAATTAATAAATTTATGTATTTTTTTTT‑ATAATTAtat                                                                       >  2:1360347/1‑126 (MQ=255)
                                                                tttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATTTATTTTTTTTT‑CTAATTATAT‑aaaaa                                                                 >  2:3410453/1‑128 (MQ=255)
                                                                tttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTTT‑CTAAGTATCT‑aaaaaa                                                                >  2:105932/1‑128 (MQ=255)
                                                                 ttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATATTGTAAATATAATTTTTAGGTATTTTTTTTT‑AATAGTATCT‑aaaaaa                                                                >  1:2990140/1‑128 (MQ=255)
                                                                 tatattatTTTTTTTA‑ATTTAAATTTTTATAAAATTAATTTGTAATTTTTAAAAA‑A‑‑‑TTCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATa                                                             <  1:449546/123‑1 (MQ=255)
                                                                  tAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTTGTTATTTTTTTTT‑CTAATATTAT‑AAAAAAAt                                                              >  2:2934224/1‑128 (MQ=255)
                                                                   ttttatTTTTTTTATATTAAAATTTTTAAAAAAATAATTTTAACTTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAg                                                            <  1:1000910/125‑1 (MQ=255)
                                                                   aGATTTTTTTTGTTTTTTAAAATATTTAAAAAATAAATTTTAAATTGAAAAAAATTGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAg                                                            <  1:1729251/128‑1 (MQ=255)
                                                                    tttatTTTTTTTTTATTTAAATTTTTAAAAAATTAATTTGAAATTTTAAAAAATA‑‑‑‑TGTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGa                                                           <  1:1900212/126‑1 (MQ=255)
                                                                    gATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATGGAAAAATAAATTTAAGGTATTTTGTTTT‑TTAAGTATAT‑AAAAAAATa                                                             >  2:817609/1‑128 (MQ=255)
                                                                     atatTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTGTAATAAAAATTTTTAGTTTTTTTTTTT‑ATAATTATAA‑AAAAAAATata                                                           >  2:3499464/1‑126 (MQ=255)
                                                                      tatTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAG‑‑ATTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTAATTTTTTTTT‑ATAATTATAT‑AAAAAAATata                                                           >  2:3334206/1‑126 (MQ=255)
                                                                          ttttttttatttaaaTTTTTAAAAAATTTATTTGTAATTTTTAAAAAAA‑‑‑TCTATTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGa                                                      <  1:1803844/116‑1 (MQ=255)
                                                                          ttttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTATATTATTGAAATATAAATTTTAATTTTTTTTTTTT‑CAAATTATAT‑Aaaaaaaaaaaaaag                                                       >  1:776043/1‑126 (MQ=255)
                                                                           ttttTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑‑‑‑‑TCTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGaaaa                                                   <  2:2592512/128‑1 (MQ=255)
                                                                            tttttaaattaaaTTTTTAAAAAATAAAATTTAAATTTTTAAAAAT‑‑T‑TATTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGTAAGGaaa                                                    <  1:3184946/118‑1 (MQ=255)
                                                                            tgtttatttaaaaTTTTAAAA‑AATTAAATTTTACTTTTTAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGaaaa                                                   <  1:2669419/118‑1 (MQ=255)
                                                                             ttttttttaaaaTTTTTAAAAAATTAATTTTAAATTTTATAAAAT‑TT‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGaaa                                                    <  2:926997/119‑1 (MQ=255)
                                                                             tttttatttaaaTTTTTAAAAAATTAATTTTTAATTTTTAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGaaa                                                    <  2:3780582/119‑1 (MQ=255)
                                                                              gTATTTTCAAATTTTTAAAAATTTATTTTGAAATTGTAAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGaaaaa                                                  <  1:3573653/128‑1 (MQ=255)
                                                                                atatGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGGTTTTTTTTTTT‑ATAAGTTTAA‑AAAAAAATATAAAGTAAAAAatt                                               >  2:2348633/1‑127 (MQ=255)
                                                                                  atGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTAATTTATTTTTTTTT‑ATAATTATAT‑AAAAAAATAaaaattaaaaatta                                               >  2:185030/1‑128 (MQ=255)
                                                                                  atGAAAATTTTTAAAAAATTTATTTTAAATTTTAAAAAATAGT‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAat                                                <  1:4576756/128‑1 (MQ=255)
                                                                                     cAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTTAAATGTAAATATAAATTTTTTTTTTTTTTTTTT‑AAAATTATAT‑‑AAAAAATATAAAAGaaaaaaaaatt                                            >  1:979885/1‑123 (MQ=255)
                                                                                     cAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTA‑AATGGAAAAATAAATTTTAGGTATTTTTTTTT‑ATAATTATCT‑AAAAAATTATAAATAAAAAAATATTGt                                           >  1:3448058/1‑128 (MQ=255)
                                                                                     cAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTATTTTTTTTTTTTTA‑AATTTAAATATAAATTTTATTTTTTTTGTTTT‑GTAATTAAAA‑AAAAAAATAAAAATAAAAAAATAtttt                                           >  1:4263501/1‑126 (MQ=255)
                                                                                     cAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTGTTTT‑TTATTTTAAT‑AAAAAAATTTAAATAAAAAAATAtttt                                           >  2:492493/1‑126 (MQ=255)
                                                                                     aaatttttTAAAAAATTTATTTGTAAATTTAAAAAAAA‑‑‑TGTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGt                                           <  1:574294/124‑1 (MQ=255)
                                                                                      aaaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGAAAATTAAAATTTTTTGTTTTTTTTTTT‑AAATTTATAT‑AAAAAAATAAAAATTAAAAAATATtttt                                          >  2:3185541/1‑128 (MQ=255)
                                                                                             taaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATTTATTTTGTTGT‑ATAATTATAT‑AAAAAAATATAAATTAAAAAATATTGTTATAATTa                                   >  2:1922857/2‑128 (MQ=255)
                                                                                              aaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTTTTTTGTTGG‑ATATTTTAGT‑AAAAAAATTGAAAGTAAAAAATATTTATAAATGTaa                                  >  1:491165/1‑128 (MQ=255)
                                                                                               aaaaattaattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTTTGTATTTTTTTTT‑GAAAATATAT‑AAAAAAAATAAAATAAAAAAAAATTGTATAAAGTataa                                >  2:3143178/4‑125 (MQ=255)
                                                                                                 aaattaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAAAAAAAATTTTTGTTATTTTTTTTTAAAAATTAAAA‑AAAAAAATA‑AAATGAAAAAAAATTTTTAAAAataataa                               >  1:4039191/2‑127 (MQ=255)
                                                                                                  aattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTATATATTGTAAATATAAATTTTTGGTATTTTTTTGT‑ATTATTTTAT‑AAAAAAATAAAATGGAAAAAATATTTTTAAAATTAATaa                               >  2:4573978/1‑127 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTTT‑ATAATTATAT‑AAAAAAATATAAAGTAAAAAATATTTTTTAAAGTAataata                             >  2:1435091/1‑128 (MQ=255)
                                                                                                    tttattTTAAATTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTaa                            <  2:4114739/125‑1 (MQ=255)
                                                                                                     taattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTA‑AAT‑TTAATTTAAATTTTTTGTATTTTTTTTT‑TATATTTTATAAAAAAAATAAAATGTAAAAAATTTTTTTaaatttaaaattaa                            >  2:4499444/1‑117 (MQ=255)
                                                                                                     taattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTTAATATAAATTTTATGTATTTTGTTGT‑CTATGTATGT‑AAAAAAATAAAAAGTAAAAATATTTGTTAAAATTtataaaaaa                           >  1:2390112/1‑123 (MQ=255)
                                                                                                     taattTGAACTTGTAAAAAATAGC‑‑‑‑‑‑TTTTTTTTTTTTTTATAATTTAAAAATAAATTTTTTTTTTTTTTTTTT‑TAAATTATAA‑AAAAAAAAATAAATTAAAAAAAATTTTTTAAATTAATAAAAAAata                        >  2:604068/1‑127 (MQ=255)
                                                                                                         ttGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATTTAAATTTTAGGTATTTTTTTGT‑GTATTTTTAA‑AAAAAAATATAAATAATAAAATTTTTTTTAAATTAATAATAAAatt                        >  1:3705620/1‑128 (MQ=255)
                                                                                                            aaCATGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                    <  2:3938096/128‑1 (MQ=255)
                                                                                                               ttGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTTTTGT‑CTAATTATCT‑AAAAAAATAGAAAGGAAAAAATATTTTTAAAATTATTACTAAAATTATTTAAtt                >  1:3846469/1‑127 (MQ=255)
                                                                                                                 gTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAATTATAAATTTTTGGTATTTTTTTTT‑AAAATTATAT‑AAAAAAATAAAATGGAAAAAATTTTGTTAAAATTATAAATAAATTTATTAAAtat               >  1:2781603/1‑126 (MQ=255)
                                                                                                                 gTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATTAAAAAAAAAATTTTATAAATTTTTTTTT‑AAAAATAAAA‑AAAAAAATAAAAAAAAAAAAATATTTTAAAAAATAAAAAAAAAaatataaataaat              >  1:245996/1‑120 (MQ=255)
                                                                                                                         aatatatcttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatt          <  1:151534/120‑1 (MQ=255)
                                                                                                                         aaatttatttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatt          <  2:2650156/121‑1 (MQ=255)
                                                                                                                          tatattttttttttttttttttttTAATGGATATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  1:1273380/124‑1 (MQ=255)
                                                                                                                          tatatttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  1:4391253/124‑1 (MQ=255)
                                                                                                                          attttttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:3640443/124‑1 (MQ=255)
                                                                                                                          atatacattttttttttttttttATAATTGAAATATAAATTTTAGGAATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  1:4178787/121‑1 (MQ=255)
                                                                                                                          aaatagcttttttttttttttttATAATGGAAATATAAATTTTAGTTATTTTTTTGT‑ATAATTATAT‑AAAAAATTTAAAATTAAAAAATATTTTTATAATTAATAATAAAATTATTTATTtttattta         >  2:166346/8‑128 (MQ=255)
                                                                                                                             agctttttttttttttttttATATTGTAAATATAAATTTTAGGTATTTTGTTGT‑CTAATTATAT‑AAAAAAATAGAAAGTAAAAAATATTTTTAAAATTAATAAAAAATTTATTTAATTTTAATTaaaa      >  1:2009976/4‑128 (MQ=255)
                                                                                                                                 ttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTta  <  2:3693020/128‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                 
AATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCT‑AAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165125‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.