New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_vch_tpiA	= 339818	90 (1.530)	5 (0.090)	5/264	7.7	6.0%	noncoding (62/358 nt)	REP23 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP23 (repetitive extragenic palindromic) element; contains 8 REP sequences
	?	NC_000913_3_vch_tpiA	= 339922	72 (1.290)					noncoding (166/358 nt)	REP23 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP23 (repetitive extragenic palindromic) element; contains 8 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCT  >  NC_000913_3_vch_tpiA/339674‑339964                                                                                                                                                  |                                                                                                                                                   cATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGc                                                                                                                                                >  1:991353/1‑149 (MQ=255)  aTTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGAtgcgct                                                                                                                                               >  1:157989/1‑144 (MQ=255)    tgtgCATCCAGCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTa                                                                                                                                             <  2:397423/149‑1 (MQ=255)    tgtgCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTa                                                                                                                                             <  2:627673/149‑1 (MQ=255)      tgCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGACCGCCTTATCCGGCCCACGAAT‑GGCGCAAGCATCTGTAGGCCTGATAAGCGTAgc                                                                                                                                           <  1:559298/149‑1 (MQ=255)          tCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGACCGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGCTAAGCGTAGCGCAt                                                                                                                                       >  2:392741/1‑149 (MQ=255)                   tGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAttt                                                                                                                              <  1:730956/149‑1 (MQ=255)                   tGCCTGCGTCGAGAAAGACATTCTTGGCTGGTGCGTACGTTACTCCGCGTGGTCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAttt                                                                                                                              <  2:950170/149‑1 (MQ=18)                     ccTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGt                                                                                                                            >  1:181064/1‑149 (MQ=255)                      cTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTc                                                                                                                           >  1:94438/1‑149 (MQ=255)                      cTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGACTACGAAT‑GGCGCAAGAATCTGTAGGCCTAATAAGCGTAGCGCATCTGGCATTTGTc                                                                                                                           >  2:114500/1‑149 (MQ=255)                      cTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGACTTTCCAGGCCAACTAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTc                                                                                                                           >  1:243937/1‑149 (MQ=25)                      cTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACATACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCACGAATCTGTAGGCCTTCTAACCGTAGCCCATCAGGCATTTTTc                                                                                                                           >  2:504186/1‑149 (MQ=25)                        gcgtCGAAAAAGCGATGCTTGGCTGGTGCGAACGTTACGGAGTCTGACCTACATGTTCATGCCGGAGGCGGACTCAACGTCTGATCCGGCGTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCAc                                                                                                                         <  2:436043/146‑1 (MQ=21)                        gCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCAc                                                                                                                         <  2:385778/149‑1 (MQ=255)                        gCTTAGAGAAAGCCATACGTGGCTGGTGCGAACGTTACGGCGTCGGACCTACATGTTCAGGCCGGAGGCGGCGTGAACGCCTTACCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCAc                                                                                                                         <  1:337259/149‑1 (MQ=21)                          ttCGAGAAAGCTATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GTCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCa                                                                                                                       <  2:886442/149‑1 (MQ=255)                          ttCGAGAAAGCCATTCTTGGGTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCa                                                                                                                       <  2:886614/149‑1 (MQ=255)                            cGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCAtt                                                                                                                     <  1:306058/149‑1 (MQ=255)                              agaAAGCCATTCTTGGCTGGTGCGAACGTTAAGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGc                                                                                                                   <  1:717688/149‑1 (MQ=255)                                 aaGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCgg                                                                                                                >  2:495069/1‑149 (MQ=255)                                   gCCATTCTTGGCTGGTGCTAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGAt                                                                                                              <  1:452011/149‑1 (MQ=255)                                   gCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGAt                                                                                                              >  2:813611/1‑149 (MQ=255)                                    ccATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATg                                                                                                             >  1:268494/1‑149 (MQ=255)                                     cATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                                                                  <  1:900176/127‑1 (MQ=255)                                     cATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                                                                  >  2:900176/1‑127 (MQ=255)                                     cATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATgc                                                                                                            >  1:267154/1‑149 (MQ=255)                                     cATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATgc                                                                                                            >  2:651216/1‑149 (MQ=255)                                       ttCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGt                                                                                                                                              <  2:660782/113‑1 (MQ=255)                                       ttCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGt                                                                                                                                              >  1:660782/1‑113 (MQ=255)                                       ttCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATgcgg                                                                                                          >  1:818218/1‑149 (MQ=255)                                        tCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATgcggc                                                                                                         <  2:286817/149‑1 (MQ=255)                                        tCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATgcggc                                                                                                         >  2:197309/1‑149 (MQ=255)                                             gCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTgca                                                                                                    >  2:997568/1‑147 (MQ=255)                                                 gTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGcc                                                                                                >  1:994598/1‑149 (MQ=255)                                                    cGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGGACGCCTTGGCCGGCCTACGAAT‑TGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTa                                                                                             <  1:979383/149‑1 (MQ=255)                                                    cGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTa                                                                                             <  1:108633/149‑1 (MQ=255)                                                     gAACGTTACGGCGTCTGACCTGCGTGTTCATGCGGGATGCGGGGTGAACGCGTTATCCGGCCTACGAAT‑GGCGCAAGATTCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCtttt                                                                                            <  2:803082/149‑3 (MQ=17)                                                     gAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTAt                                                                                            <  1:806842/149‑1 (MQ=255)                                                      aaCGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTCGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATc                                                                                           >  1:236737/1‑149 (MQ=255)                                                          ttACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCa                                                                                                                       <  1:583053/117‑1 (MQ=255)                                                          ttACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCa                                                                                                                       >  2:583053/1‑117 (MQ=255)                                                          ttACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                                       >  1:726559/1‑149 (MQ=255)                                                          cgacgcggTCTGATCTACTTGTTTATTCTGGGGTCGGCTTGAACGCCTGTTCCGGCCTACGAAT‑TGCGCAACAATCTTTATGCCTTATAACCGTATCGCGTTCGGCATTTTTCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                                                       <  2:157953/142‑1 (MQ=9)                                                                  tCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATc                                                                                           <  1:276355/137‑1 (MQ=255)                                                                  tCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATc                                                                                           >  2:276355/1‑137 (MQ=255)                                                                  tCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAt                                                                               <  1:386609/149‑1 (MQ=255)                                                                      aCCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAt                                                                                                                                <  1:206779/96‑1 (MQ=255)                                                                      aCCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAt                                                                                                                                >  2:206779/1‑96 (MQ=255)                                                                        cTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATGAGGCATTTGTCAAAATTGCCGGCTGCGGCGTGTACGCCTTATCCGGCCTCCGACTGgcgcg                                                                         >  2:611527/1‑148 (MQ=14)                                                                        cTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGcc                                                                                                                  <  2:427309/108‑1 (MQ=255)                                                                        cTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGcc                                                                                                                  >  1:427309/1‑108 (MQ=255)                                                                         tACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCaa                                                                        <  1:522975/149‑1 (MQ=255)                                                                          aCATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCGCCATCGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGAATGGCGCCAg                                                                       >  1:141257/1‑149 (MQ=255)                                                                             tGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGGGCCCGAAt                                                                    >  1:881467/1‑149 (MQ=255)                                                                              gTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCGTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGCATGCGCCATGAACTCCTTATCCGGCCTACAAGTGGCGCAGGAATc                                                                   >  2:947781/1‑149 (MQ=14)                                                                                  aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGAAAGAATCTGTAGGCCTAATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGTTGCGGCGGGAACGCCTTATCCGCCCTACGGAGGGGGCCAGAGTCTgga                                                               >  1:183583/1‑147 (MQ=14)                                                                                   tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTGCCCAATCAGGCATCTGTCACCGTTGCCGGCTCCAGCGCCAACGCCTTATACCACCAACGAATGGAGCAAGTATCGGtgg                                                              >  2:825902/1‑147 (MQ=14)                                                                                      cGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTCGTCACCATTGCCGGATGCGGCGGGAACGCCTTATCCGGCCTACGACTGGCGCAAAAATCTGTAGGcc                                                           >  2:902734/1‑149 (MQ=255)                                                                                       ggATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCt                                                          <  1:197309/149‑1 (MQ=255)                                                                                       ggATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCt                                                          <  1:651216/149‑1 (MQ=255)                                                                                            cggcgTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGGAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATaa                                                     <  1:174967/149‑1 (MQ=255)                                                                                            cggcgTGAACGCCTTACCCGGCCTACGAAT‑GACGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATaa                                                     <  1:175292/149‑1 (MQ=255)                                                                                              gcgTGAACGCCTTATCCGGCCTACGAATAGGTGTATG‑AGCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAGACTGTCGGCCTTATAAGc                                                   >  2:494319/1‑149 (MQ=14)                                                                                                 tGAACGCCTTATCCGGCCTACAAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTa                                                >  1:511191/1‑149 (MQ=255)                                                                                                  gcaCGCCGTCTCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGAGAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCAGATAAGCGTAg                                               <  1:438685/147‑1 (MQ=14)                                                                                                   aaCGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGGGCAAGAGTCTTGAGTCCTGATAAGCGTAgc                                              >  1:803143/1‑149 (MQ=14)                                                                                                      gCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGa                                                                                                     >  1:830181/1‑91 (MQ=38)                                                                                                       ccTTATCCGGCCTACGAAT‑GGCGCAAGAATATGACTTCCGGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCGGTGGGCCTGGTAAGGGTAGCGCAt                                          >  2:227703/1‑149 (MQ=14)                                                                                                         ttATCCGGCCTACGTAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCa                                        <  1:266401/149‑1 (MQ=255)                                                                                                          tATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTa                                                               <  1:14025/125‑1 (MQ=255)                                                                                                          tATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTa                                                               >  2:14025/1‑125 (MQ=255)                                                                                                              cGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAt                                   >  2:51244/1‑149 (MQ=255)                                                                                                               ggCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAt                                                                               >  2:474480/1‑104 (MQ=40)                                                                                                               ggCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAt                                                                               <  1:474480/104‑1 (MQ=40)                                                                                                                gCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAttt                                 <  1:932265/149‑1 (MQ=255)                                                                                                                   tACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCg                                                                                                                 >  2:139523/1‑66 (MQ=255)                                                                                                                    aCGACT‑GGCGCAAGAATCTGTAGGCTTGATCAGCGTAGCGCATCAGGCATCTGTCACCATTGCCGGATGCGGCGTGAACGACTTCTGCGGCTTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGcca                             <  1:874710/149‑1 (MQ=14)                                                                                                                       aaT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAGCAGGCATTTGccgcca                          >  1:356827/1‑149 (MQ=255)                                                                                                                              gcAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCCCACCAGCCATTTGTCGCCACTGCCg                    >  2:1026858/1‑149 (MQ=11)                                                                                                                               cAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCACATCAGGCATTTGCCACCACTGCCgg                   >  1:1019631/1‑149 (MQ=255)                                                                                                                                           ggCCTGATAAGCGTCGCGCATCCGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCGTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCCCTGCCGGATGCGGCGTGGa       <  1:936908/149‑1 (MQ=255)                                                                                                                                           ggCCTGATAAGCGTAGCGCATCCGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGACCAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGa       <  2:175539/149‑1 (MQ=255)                                                                                                                                           ggCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGa       <  2:1019631/149‑1 (MQ=255)                                                                                                                                            gCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGAc      >  1:432827/1‑149 (MQ=255)                                                                                                                                             ccTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCCCCACTGCCGGCTGCGGCGGGGGCg     >  1:340700/1‑149 (MQ=255)                                                                                                                                             ccTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACg     >  1:788568/1‑149 (MQ=255)                                                                                                                                              cTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGc    >  1:628624/1‑149 (MQ=255)                                                                                                                                               tGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGcc   <  2:511191/149‑1 (MQ=255)                                                                                                                                               tGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGcc   >  1:507251/1‑149 (MQ=255)                                                                                                                                                gATAAGCGTAGCGCATCAGGCATTTGTCACCATTGGCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTATTGCGCGAGAATCTTTAGGCCTGATAAGCGTAGCCCACCGGGCGTTTGCCACCACTGCCGGATGCGGCGCGGACGCCt  >  2:621346/1‑149 (MQ=14)                                                                                                                                                  |                                                                                                                                                   CATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAAT‑GGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCT  >  NC_000913_3_vch_tpiA/339674‑339964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.