New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	= 3699911	65 (1.090)	6 (0.110)	6/260	6.7	8.8%	intergenic (+18/+69)	bcsG/ldrD	DUF3260 family cellulose production inner membrane protein/toxic polypeptide, small
	?	NC_000913_3_pae_pgi	= 3699921	63 (1.130)					intergenic (+28/+59)	bcsG/ldrD	DUF3260 family cellulose production inner membrane protein/toxic polypeptide, small
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAAAAAACTCACCAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCAT  >  NC_000913_3_pae_pgi/3699764‑3700053                                                                                                                                                    |                                                                                                                                               gAAAAAACTCACCAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGACCGAACGTCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga                                                                                                                                               >  1:986989/1‑149 (MQ=255)    aaaaCTCACCAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGtt                                                                                                                                            >  1:981360/1‑149 (MQ=255)          cACCAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccccc                                                                                                                                      <  1:778006/149‑1 (MQ=255)           aCCAGTGGGTTGCCACAAACAGCACCGGTCTCCGGGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGATCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCACTAAGAACGAAAAAGGCCGCAGACTTTcccccc                                                                                                                                     >  2:253519/1‑149 (MQ=255)            ccAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGCTAAACCGTACGTTAGCCTGAACGGCGGAGACTGGCTGACTTACTGGCAGGAAGAACGAGAGAGGCCGCAGCGTTTCCCCCCt                                                                                                                                    >  2:112639/1‑149 (MQ=255)             cAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGAAGTTATTCAATACCAGGCTAAACCGTACGTGCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAACAGGCCCCCGAGTCTACCCCCTg                                                                                                                                   >  2:544362/1‑149 (MQ=255)                 gggTTGTCACAAACAGCACCGGTCTTCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATACACCGTACGTTCGCCTGGCCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGc                                                                                                                               <  1:950945/149‑1 (MQ=255)                   gTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACCGGGTGCCTTACCCCCAGTAAGAACGAAAAAAGCCCCAGATATTCGCCCCTGCGGccc                                                                                                                             >  2:58432/1‑148 (MQ=255)                    ttGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGGTTCCCCCCTGCGGCCTg                                                                                                                            >  1:77690/1‑149 (MQ=255)                       ccACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTc                                                                                                                         >  1:531349/1‑149 (MQ=255)                        cacaAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCCGTAAGAACGAAAAAGGCCGCAGAGTCTCCCCCCTGCGACCTGGTcc                                                                                                                        >  2:578752/1‑149 (MQ=255)                        cacaAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTAGTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCATTACCCGCGGTAAGAACGATACAGGCCGCAGCATTTCCCACCTGCGGccctgccc                                                                                                                        >  2:732178/1‑143 (MQ=255)                        cacaAACAGCACCGGCCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCGGCAGAGTTTCCCCCCTGCGTCCTGGTcc                                                                                                                        >  1:932006/1‑149 (MQ=255)                               aGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGTCGCa                                                                                                                 >  2:745874/1‑149 (MQ=255)                               aGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCa                                                                                                                 >  1:180885/1‑149 (MQ=255)                                 cACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCAGGCGCaaa                                                                                                               >  1:367298/1‑149 (MQ=255)                                        ctcAGAGAACGCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTGACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAt                                                                                                        <  1:334452/149‑1 (MQ=255)                                            gagaACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACg                                                                                                    >  1:558136/1‑149 (MQ=255)                                                  tCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGcc                                                                                              >  1:492437/1‑149 (MQ=255)                                                    aaaTGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCtc                                                                                            >  2:542571/1‑148 (MQ=255)                                                       tGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCGTTACGGCAGCCTGACg                                                                                         >  2:137150/1‑149 (MQ=255)                                                         cAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGcc                                                                                       <  2:87562/149‑1 (MQ=255)                                                          agtagtTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCGGACGccc                                                                                      <  2:79227/149‑1 (MQ=255)                                                           tcttttATTCATTACCAGGATATACCGTATGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCg                                                                                     <  2:474751/145‑1 (MQ=255)                                                             agtTATGCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCa                                                                                   <  1:945885/149‑1 (MQ=255)                                                               ttATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGACAAACCCTCAATAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGccccccga                                                                                 >  1:474751/1‑144 (MQ=255)                                                               ttATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTAGGTGCCTTACCCGCGGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCTGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATg                                                                                 >  1:926160/1‑149 (MQ=255)                                                                tATTCAATACGAGGATAACCCGTACGTTCGACTGAACGGCGGCGACTGGGTCCCTTACCCGCAGTAAGAACGACAAAGGCCGCAGAGTTTCCCCGCTGCGGCCTGGTCCGGGCGCAAATGGCCATTACGGCAGCCTGACGCCCGCATGa                                                                                <  2:227837/149‑1 (MQ=255)                                                                tATTCAAGACCCGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCGTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCGCGCATGa                                                                                <  2:485716/149‑1 (MQ=255)                                                                  atCAATACCAGGACAACCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGGCTGACGCCCGCATGaca                                                                              <  2:657730/148‑1 (MQ=255)                                                                    cAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGCCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACg                                                                            <  2:577449/149‑1 (MQ=255)                                                                     aaTACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGt                                                                           <  2:981360/149‑1 (MQ=255)                                                                     aaTACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACCGCCGCCTGACGCCCGCATGACACGt                                                                           >  2:688598/1‑149 (MQ=255)                                                                          cAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCa                                                                                                         <  1:1036192/114‑1 (MQ=255)                                                                          cAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCa                                                                                                         >  2:1036192/1‑114 (MQ=255)                                                                          cAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACG‑AAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGCCCCGTTACTTc                                                                     >  2:1009142/1‑149 (MQ=255)                                                                          cAGGATAAACCGCACGTTCGCCTGAACGGCGGCCACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGGTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACtt                                                                      <  2:627120/149‑1 (MQ=255)                                                                           aGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCGTGACACGTTCCTTc                                                                     >  2:1035753/1‑149 (MQ=255)                                                                                aaaCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCtt                                                                <  2:663681/149‑1 (MQ=255)                                                                                   ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTa                                                                         >  2:933626/1‑137 (MQ=255)                                                                                   ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTa                                                                         <  1:933626/137‑1 (MQ=255)                                                                                      tACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAg                                                          <  2:180885/149‑1 (MQ=255)                                                                                       aCGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGc                                                         <  2:8974/149‑1 (MQ=255)                                                                                       aCGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGc                                                         <  1:745874/149‑1 (MQ=255)                                                                                         gTTCGCGTGAACCGCGGCGACTGGGTGCCATACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGAACATCGAGATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCa                                                       <  1:207049/149‑1 (MQ=255)                                                                                          ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACCCGTTACTTCCGCTTGTTCAGCCAg                                                      >  2:674009/1‑149 (MQ=255)                                                                                          ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAg                                                      >  1:203433/1‑149 (MQ=255)                                                                                          ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAg                                                      >  2:582231/1‑149 (MQ=255)                                                                                              ccTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCa                                                  <  2:142651/149‑1 (MQ=255)                                                                                                             cTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCaa                                   <  1:578752/149‑1 (MQ=255)                                                                                                                ggTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGACAGTTCACGATCATACTGGCACGaa                                >  2:323430/1‑149 (MQ=255)                                                                                                                  tGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGacac                                                                             >  1:850332/1‑102 (MQ=255)                                                                                                                  tGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGacac                                                                             <  2:850332/102‑1 (MQ=255)                                                                                                                  tGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATg                              >  1:707307/1‑149 (MQ=255)                                                                                                                          ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGa                                                                                >  2:400785/1‑91 (MQ=255)                                                                                                                          ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGa                                                                                <  1:400785/91‑1 (MQ=255)                                                                                                                          ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAAt                      >  1:839654/1‑149 (MQ=255)                                                                                                                          ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCAGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAAt                      <  1:470145/149‑1 (MQ=255)                                                                                                                          ccGCAGTAAGAACGAAAAAGGCCGAAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCCCGATCATCCTGGCAAGAATGCCAGCAAt                      >  1:913765/1‑149 (MQ=255)                                                                                                                           cGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATg                     >  1:230670/1‑149 (MQ=255)                                                                                                                              aGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCAGGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGAcc                  <  1:778381/149‑1 (MQ=255)                                                                                                                                   gAACGAAAAAGGCCGCAGATTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGtt                                                    <  1:245507/110‑1 (MQ=255)                                                                                                                                   gAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGtt                                                    >  2:245507/1‑110 (MQ=255)                                                                                                                                      cGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCTGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGc          <  2:926160/149‑1 (MQ=255)                                                                                                                                              gCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGACGCAAATTACCATTACGGGAGCCTGACGCCCGAATGACACGGTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAAGGCCAGGAGCCGCTAAATCAt  >  1:112370/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                               GAAAAAACTCACCAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCAT  >  NC_000913_3_pae_pgi/3699764‑3700053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.