New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	687851 =	NA (NA)	47 (0.850)	38/286	0.5	97.9%	intergenic (‑104/+146)	gltI/insH1	glutamate/aspartate periplasmic binding protein/IS5 transposase and trans‑activator
	?	NC_000913_3_bme_pgi	869874 =	1 (0.020)					coding (464/1539 nt)	gsiB	glutathione ABC transporter periplasmic binding protein

AGCGCCAGGGCGAGGATTGCTGTGGCAGGTTTACGTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGC  >  NC_000913_3_bme_pgi/687704‑687982                                                                                                                                                    |                                                                                                                                    aGCGGCAGGGCGAGGATTGCTGTGGCAGGTTTACGTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAggg                                                                                                                                    <  1:560351/149‑1 (MQ=255)      cAGGGCGAGGATTGCTGTGGCAGGTTTACGTAATTGCATGTCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACACGTTGTGAGTGTTGGTGTTGTTATCGTCTGCAACTTTATTGTGCACGCTTGTGCATGTTAGGGAAAGt                                                                                                                               >  2:765955/1‑149 (MQ=255)        gggCGAGGATTGCTGTGGCAGGTTTACGTAATTGCATATGCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGc                                                                                                                             <  1:613732/149‑1 (MQ=255)          gCGAGGATTGCTGTGGCAGGTTTACGTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCGGTGTTGTGCCTGTTAGGGGAGGTGCGa                                                                                                                           >  2:211827/1‑149 (MQ=255)                    cTGTGGCAGGTTTACGTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCgggg                                                                                                                 >  1:608243/1‑149 (MQ=255)                          ctggTTTACGTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAAttc                                                                                                           <  1:494276/147‑1 (MQ=255)                          cAGGTTTACGTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAAttc                                                                                                           <  1:494356/149‑1 (MQ=255)                          cAGGTTTACGTAATTGCATATCCAACTCCTTTATATTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAAttc                                                                                                           >  1:995899/1‑149 (MQ=255)                           aGGTTTACGTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGcag                                                                                                                   <  1:682516/140‑3 (MQ=255)                           aGGTTTACGTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGcag                                                                                                                   >  2:682516/1‑138 (MQ=255)                                  ggTAATTGCATATCCAACCCCTTTGTCTTCTGCGTTAAGAGCGCATGGATACCCGTTGTGGGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGc                                                                                                   <  2:820550/148‑1 (MQ=255)                                   gTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAGCTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGCAATGCTTCTCGGcc                                                                                                  >  2:807141/1‑148 (MQ=255)                                   gTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCt                                                                                                  <  1:74394/149‑1 (MQ=255)                                    tAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg                                                                                                 >  1:4747/1‑149 (MQ=255)                                           atatCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAg                                                                                                                      >  1:241703/1‑121 (MQ=255)                                           atatCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAg                                                                                                                      <  2:241703/121‑1 (MQ=255)                                            tatCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtc                                                                                         >  1:508316/1‑149 (MQ=255)                                               ccAACTTCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                                                      <  1:380495/149‑1 (MQ=255)                                                   ctgcTTGATCTTCTGCGTTAAGAACGCATTGATACCCGTTGTGAGTGGTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat                                                                                  <  1:521993/146‑1 (MQ=255)                                                      cTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCatttcatttc                                                                               >  1:263536/1‑149 (MQ=255)                                                      cTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTCGTTATCGTCTGCAACTTTATTGTGCAGGGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCatttcatttc                                                                               >  1:891943/1‑149 (MQ=255)                                                             ttctGCGTTAAGAACGCATGGATATCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGTGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                                                        <  1:611033/149‑1 (MQ=255)                                                              tcggCGTTAACAACGCATGGATACCCGGTGTGAGTGTTTGTGTTGTTTGCCTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGtt                                                                       <  1:79193/146‑1 (MQ=25)                                                               ttGCGTTAAGAATGCATGGATACCTGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCATTTATTTCCATTCTTTAttttg                                                                      <  2:222582/148‑2 (MQ=37)                                                               ctGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt                                                                      <  1:516431/149‑1 (MQ=255)                                                                   gTTCAGAACGCCTGGATGACCGTTGTGATGGTTTGGGTTTTTTCCGTTTGCAACTTTATTGTGCAGTGTTGTGGCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGc                                                                  <  2:80111/149‑1 (MQ=18)                                                                    ttAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGcc                                                                 >  2:102973/1‑149 (MQ=255)                                                                      aaGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCTGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGa                                                               <  2:883649/149‑1 (MQ=255)                                                                                 gATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTccc                                                    <  1:855928/149‑1 (MQ=255)                                                                                      ccGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaaa                                               >  2:539291/1‑149 (MQ=255)                                                                                      ccGTTGTGAGTGTGTGTGTTGTTATCATCTGCAACTTTATTGTGCAGTGTCGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTTTTCCGTtaa                                               >  1:826272/1‑149 (MQ=21)                                                                                         ttGTGAGTGTTTGGGTTGTTATCGTCTGGAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCTGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGc                                            <  1:648898/149‑1 (MQ=255)                                                                                          tgtgAGTGTCTGTGTTGTTATCGTCTGCAATTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGCGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGcc                                           <  1:512439/149‑1 (MQ=255)                                                                                           gtgAGTGTTTGGGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCt                                          <  2:295750/149‑1 (MQ=255)                                                                                              aGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTACGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGACGATTTTTTCGCCCGTAAATGCCTTGa                                       >  1:778627/1‑149 (MQ=255)                                                                                               gtgtTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGTTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGGCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa                                      <  1:640894/149‑1 (MQ=255)                                                                                                  tgtgtgtgGTTATCGTCTGCAACGTTATTGTGGAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTAGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCa                                   <  2:239847/147‑1 (MQ=255)                                                                                                      tgttgtTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTATCGGCTGACTCAGTCATTTCATTGCTTCATGTTTGAGCGGATTTTTTGTCCCGTAAATACCTTGGATTTGCCt                               >  2:911700/1‑149 (MQ=18)                                                                                                       gttgttATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTGCCGTAAATGCCTTGAATCAGCCTa                              >  2:541343/1‑149 (MQ=255)                                                                                                         tgttATCGTCTGCAATTTTATTGTGCCGGGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAtt                            <  2:209989/149‑1 (MQ=255)                                                                                                         tgttATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAtt                            <  2:995899/149‑1 (MQ=255)                                                                                                         tgttACCGTCTGCAAATTTATGGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAtt                            <  2:478310/149‑1 (MQ=255)                                                                                                           ttATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCGTTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                          >  1:768994/1‑149 (MQ=255)                                                                                                              tCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGAc                       >  1:712929/1‑149 (MQ=255)                                                                                                                gTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATAAGCCTATTTAGACCg                     >  1:575155/1‑149 (MQ=255)                                                                                                                    gaaaCTGTAGTGTGCAGTGTTGGGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAGTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttc                 <  1:198745/147‑1 (MQ=255)                                                                                                                    gCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTGCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttc                 <  2:263536/149‑1 (MQ=255)                                                                                                                    gCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttc                 >  1:918426/1‑149 (MQ=255)                                                                                                                     cAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttct                >  1:635352/1‑149 (MQ=255)                                                                                                                      aaCTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGGCTATTTAGACAGtttttt               >  1:368888/1‑149 (MQ=255)                                                                                                                        cTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg             >  1:216757/1‑149 (MQ=255)                                                                                                                                tgCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAGGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCATATTTAGAGCGTTTCTTAGCCATTTaa     >  2:228740/1‑149 (MQ=255)                                                                                                                                tgCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGACTATTTAGACCGTTTCTTCACCATTTaa     >  1:181135/1‑149 (MQ=255)                                                                                                                                  cAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAgg   <  1:102973/149‑1 (MQ=40)                                                                                                                                  cAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTATCGGCTGACTAAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTATACCGTTTCTTCGCCATTTaatg   >  2:507068/1‑147 (MQ=255)                                                                                                                                   aGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGc  <  1:215267/149‑1 (MQ=39)                                                                                                                                   aGTGTTGTGCCTGGTAGGGAAGGTGCGAATAAGCCGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGc  <  1:817849/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                    AGCGCCAGGGCGAGGATTGCTGTGGCAGGTTTACGTAATTGCATATCCAACTCCTTTATCTTCTGCGTTAAGAACGCATGGATACCCGTTGTGAGTGTTTGTGTTGTTATCGTCTGCAACTTTATTGTGCAGTGTTGTGCCTGTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGC  >  NC_000913_3_bme_pgi/687704‑687982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.