New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913_3_bme_pgi | 781577 = | 58 (0.970) | 30 (0.510) +GAAG |
8/290 | 5.2 | 45.1% | noncoding (1/76 nt) | lysQ | tRNA‑Lys |
? | NC_000913_3_bme_pgi | = 2521006 | 17 (0.280) | noncoding (76/76 nt) | valU | tRNA‑Val | |||||
Rejected: Coverage evenness skew score above cutoff. |
ACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTC > NC_000913_3_bme_pgi/2520857‑2521131 | acgaacgaACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACccacca > 1:137565/1‑150 (MQ=255) cgaacgaaCAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTAACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa > 1:581001/1‑150 (MQ=255) aacgaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACccaccactt > 2:330913/1‑147 (MQ=255) tCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTAACACGAGTGGGACGGCGTTTCGATACCGTCATCACACACCAACTACGATATGTAg > 1:597433/1‑150 (MQ=25) tgaacttGCGGTGACTCATTTTGAACTCTCCCTATACTGCCACTCCACACAGCTGGGGTGATTAGCTCAGCGGGGAGAGCACGTCCCTTACTAGGATGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCTACTTTATGTAGTCTcc < 2:554924/144‑1 (MQ=21) aGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTcc > 2:3632/1‑150 (MQ=255) tGACTGATTTTGAACTCTCCCTATAATGCGACTCCTCTCAGCGGGGGTGATTAGCTGAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTGGGCGGTGCGATCCCGTCATCACCCTCCAACTACTTTATGTAGTCTCCGCCGTGTAGCa < 1:937168/150‑1 (MQ=25) cccTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAg > 2:777243/1‑145 (MQ=255) cccTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAg < 1:777243/145‑1 (MQ=255) cccTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGt < 2:750883/150‑1 (MQ=255) cTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGa > 1:741853/1‑150 (MQ=255) aTGCGACTCCCCACCGCGGGGGTGCTTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGGCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGc < 2:211402/150‑1 (MQ=255) cGACGCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCa < 2:870887/150‑1 (MQ=255) ccACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCCCCCACCACCTACGTTAGGTAGTGACGGCCGTTTAGCAAGAGATTGAGAATTGTGTGATAAGCTCAGCTgg > 2:507351/1‑150 (MQ=18) caccGCGGGGGGGATAAGCGCCGCTGGGAGAGCACCTCCCTTACAACGAGGGGGTCGGCGGTTCTATCCCGTCATAACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAAATGAGAAGTGGGTGATTAGCTCAGCTGGgag < 2:279886/150‑1 (MQ=25) gtgggTGCTAAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCAcc < 2:489798/148‑1 (MQ=255) cccTTACAATGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCCAGAAATTGCGCAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGAt < 1:363238/150‑1 (MQ=255) ggcggATCGATCCCGTCATCACCCACCAACTACTTTATGTAGCCTCCGCCGTCAAGCAACAAATTGACAAGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACt < 1:380828/150‑1 (MQ=21) gtttCGATCCCGTCATCACCCACCAACTCCATTATCTAGTCACCGCCCTTTAGCAAGAAAATGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTtc < 2:741853/148‑1 (MQ=18) | ACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTC > NC_000913_3_bme_pgi/2520857‑2521131 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |