New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913_3_bme_pgi | 781577 = | 58 (0.970) | 30 (0.510) +GAAG |
8/290 | 5.2 | 45.1% | noncoding (1/76 nt) | lysQ | tRNA‑Lys |
? | NC_000913_3_bme_pgi | = 2521006 | 17 (0.280) | noncoding (76/76 nt) | valU | tRNA‑Val | |||||
Rejected: Coverage evenness skew score above cutoff. |
TCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG > NC_000913_3_bme_pgi/781428‑781725 | tCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAgg < 1:675929/150‑1 (MQ=255) tCCTGCACGACCCACCAATTTAAAGCTGGTTACTGGTAGAGAACGTGAAGGATATCGTGGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAgg < 1:112479/150‑1 (MQ=255) ccTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAggg > 2:404956/1‑150 (MQ=255) cGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGtt > 1:479256/1‑150 (MQ=255) taCCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTa < 1:265697/149‑1 (MQ=255) ccaccaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGcg > 2:421210/1‑149 (MQ=255) ccaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAg < 2:436319/150‑1 (MQ=255) aTTTAAACGCTGATACTGCTCGATAACGTGAATGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTg < 1:757380/150‑1 (MQ=25) ggtggtTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGc > 1:742498/1‑150 (MQ=255) ggtggtTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGCGCGACACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAAAGATTAAGGCAGCATAATCCCGCAACGGGTCGTTAGCACAGTAGCTACAGc > 1:432273/1‑150 (MQ=25) gggtTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAg < 2:614231/149‑1 (MQ=255) cTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACt > 1:417038/1‑150 (MQ=255) gagaACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt > 1:271031/1‑150 (MQ=255) gTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGCCCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCACGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGCCTTTTAATCAAttt > 2:751365/1‑149 (MQ=255) gTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAATg > 1:301016/1‑150 (MQ=255) tGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATGCTGAATGATAAAGGAAGCATATTCCATCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTgg > 2:337174/1‑150 (MQ=25) aGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCg > 2:358589/1‑150 (MQ=255) ggATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATACTGAAAGATTAAGGCAGCATAATACAGGAAGGGGTCGGTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCATTTGGTCGc > 2:494401/1‑150 (MQ=25) cGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCCTCCTGCACGACCCCCCATACTTAAAGATAACGCCAGCATAATACCGGATGGGGTGGGTAGCTCAGATGGTATAGAAGATGCATGTTAATAAGTGTGTCGCATGTTc > 2:869861/1‑150 (MQ=12) aGCAACTGCGCGACGTGGGAGACGTATTCGAGTCATCCTGCACGACCCACCATCCTTAATGATTAAGGCACCATAACACCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGc < 1:308674/150‑1 (MQ=21) gCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACCACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCTAGGGGTCGTTAGCTCAGTTGGTAGAGCCGGTGACTTTTAATCAATTGGTCGCAGGTACGAATcattcc > 1:636077/1‑145 (MQ=37) cccGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACcca > 1:151079/1‑150 (MQ=255) cccGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACcca > 1:882226/1‑150 (MQ=255) ccGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATGCTGAATGATAAAGGCAGCAGAAGCAAGGAAGGGGTCGTGAGCGCAGTTGGTAGCGGAGTTGGCTTGTAATGAATTGGTCGCAGGTTCGAAGCCTGCACGACcaac > 2:605037/1‑150 (MQ=21) ccGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccac > 1:58028/1‑150 (MQ=255) ccGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccac > 1:241741/1‑150 (MQ=255) ggCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGAAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGt > 1:489148/1‑150 (MQ=255) atgTCGAGTCTTCGTGGAGGACCCTCCATGGTGATTGATTATGGCAGCATAATCCGGCAAGGGGTCGTTAGCTCTGTTGGTCGAGCAGTTGTCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAATAgcg < 2:432273/148‑1 (MQ=17) aaGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAgcg < 2:742498/150‑1 (MQ=255) aGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAgcgc > 2:75396/1‑150 (MQ=255) cATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgg < 2:271031/150‑1 (MQ=255) aTCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGGCGTTAGCGCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGGTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgc > 2:424263/1‑150 (MQ=255) ccTGCACGACCCACCATCCTGAATGATTAAGGCAGAATAATCCCGCAAGGGGTCGTTAGCACAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGGACGACGCCCCAATGTAAAAAAGCGCCCTTAAGgcgg > 2:835334/1‑149 (MQ=21) tGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTTGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAACCGCCCTAAAGGCGCtt > 1:544285/1‑150 (MQ=255) tGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCtt > 1:892008/1‑150 (MQ=255) gCACGCCCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGGTAGCTCAGTTGGTAGAGCAGTTGACATTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCgtt > 1:634518/1‑150 (MQ=255) gCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttt > 1:206873/1‑150 (MQ=255) gCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttt > 2:430541/1‑150 (MQ=255) cccACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCTTTAGGGCGCttttttaca < 2:241741/150‑4 (MQ=255) cccACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCTTTAGGGCGCttttttaca < 2:58028/150‑4 (MQ=255) ccaTCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAACTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCt < 2:301016/150‑1 (MQ=255) ctccaTGATTACGTCACCCTAACCCCCCTAGGGGTCGGTAGCTCAGTTGGTAGAGCAGTAGACTTTTAATCAATTGGTCGCAGGGTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGAt < 1:281726/146‑1 (MQ=11) tGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATa > 1:452938/1‑150 (MQ=255) tGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATa > 1:709143/1‑150 (MQ=255) gAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGATAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAc > 2:219604/1‑150 (MQ=255) aGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAACGCGCCGTAAAGGCGCTTTTTTGCTATGTGGGATACTCAAAGAtt > 2:177166/1‑150 (MQ=255) ggCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATATGCGATACTCAAAGATTc > 2:721367/1‑150 (MQ=255) ccagcaTACTCCCGCAAGGGGGCGTTAGCTCACTTGGTAGCGCCGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCg < 2:879082/149‑1 (MQ=14) cagcaTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAACAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGCTACTCAAAGATTCGa > 2:557858/1‑150 (MQ=255) agcaTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGaa < 1:75396/150‑1 (MQ=255) tAATCCCGCCATGGGTCGATCGCTCACATGGTAGTGCAGTTGACTTTTAATCAATTGGTCGTAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTg < 1:956353/150‑1 (MQ=11) tAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCTATACTAAAAGATTCGAACCTg > 2:272836/1‑150 (MQ=255) aaTCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTgc < 2:417038/150‑1 (MQ=40) tCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGAACTACACACCAATGTAAAAAAGCGCACTAAAGGCGCTTTTTTGCTATCTGCCAAACACAAAGATTCTAACCTgcag > 1:549452/1‑150 (MQ=14) cccGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTgcagc > 2:388362/1‑150 (MQ=38) cccGCAAGGGGTCGATAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTgcagc < 1:219604/150‑1 (MQ=38) aaGGCGTCGTTAGCTCAGTTGGGAGAGCAGATGACATATAATCAATTGGTCGCAGCTTCGAAACCTGCACGACCCACCAATGTAAAAAAGCGCCCTACAGGCGCTTATTTGCTATCTGCGATACTCAAAGATACGACCGTGCAGCAgggt > 2:572241/1‑148 (MQ=11) ggggTCGTTACCTCAGTTGGTAGAGCACTTGACTTTTAATCAATTGCTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttg < 1:389871/150‑1 (MQ=12) | TCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG > NC_000913_3_bme_pgi/781428‑781725 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |