| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913_3_bme_pgi | 3,816,594 | Δ9 bp | intergenic (‑45/‑74) | rph ← / → yicC | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH/UPF0701 family protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913_3_bme_pgi | 3816594 | 3816602 | 9 | 45 [0] | [0] 45 | rph/yicC | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH/UPF0701 family protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_bme_pgi | = 3816593 | 0 (0.000) | 44 (0.990) | 40/284 | 0.2 | 100% | intergenic (‑44/‑83) | rph/yicC | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH/UPF0701 family protein |
| ? | NC_000913_3_bme_pgi | 3816603 = | 0 (0.000) | intergenic (‑54/‑73) | rph/yicC | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH/UPF0701 family protein | |||||
AATTCGACCAGCACCGAGCCTTCTGCATGTTTTGTATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGGACTTCCGGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGGAGCGCAACCTGGGAAATGCGC > NC_000913_3_bme_pgi/3816455‑3816750 | gtatcgccaaattcgaccagcaccgagccttctgcatgttttgtctagttacgagtcagggtaacgggacgcacctgatgattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgc < 1:597007‑M2/1‑1 (MQ=255) gccaaattcgaccagcaccgagccttctgcatgttttgtatagttacgagtcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctacgcattatacgCAGTTa > 1:265509‑M2/144‑149 (MQ=255) aaattcgaccagcaccgagccttctgcatgttttgtatagttacgagtcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTc < 2:577181‑M2/9‑1 (MQ=255) accatcaccgagccctctgcatgttttgtattgttacgagtcagggtgacgggacgctcctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCt < 2:462773‑M2/16‑1 (MQ=255) gcaccgagccttctgcatgttttgtatagttacgagtcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACa > 1:26448‑M2/130‑149 (MQ=255) caccgagccgtctgcatgttttgtatagttacgagtcagggtaacgggacgcacctgattattgctacggcctgctggacgcatactgaaatctccggcctgaaacaaatgtggctgcgcattattcgCGGTTATTCCTATCCTGACaa < 2:466552‑M2/21‑1 (MQ=255) ctgcaagttttgtatagttacgagtcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATgg < 2:273025‑M2/32‑1 (MQ=255) tatagttacgagtcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTc < 1:32154‑M2/44‑1 (MQ=255) atagttacgagtcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTcc < 1:188141‑M2/45‑1 (MQ=255) tagttacgagtcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCa > 2:438301‑M2/104‑149 (MQ=255) tagttacgagtcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCa < 2:576250‑M2/46‑1 (MQ=255) agttatgagtcagggtaacgggccgccactgattattgctacggcctccaggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATGCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCAc < 1:188477‑M2/47‑1 (MQ=255) cgaggcagggtaacgggacgcacctgattattgctacggcctgctgggggcatatggaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCtctc < 2:752878‑M2/52‑1 (MQ=255) gtcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCtt < 2:44109‑M2/55‑1 (MQ=255) tcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCCTCGATGGCTATAATCCTTCCACCTCTCCttt < 1:426942‑M2/56‑1 (MQ=255) tcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCCCCTCTCCttt > 2:281086‑M2/94‑149 (MQ=255) tcagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCttt > 2:34775‑M2/94‑149 (MQ=255) cagggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCtttt > 1:617107‑M2/93‑149 (MQ=255) agggtaacgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTta > 1:408267‑M2/92‑149 (MQ=255) acgggacgcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatatggctgctcattatacgCGGTTATTCCTATCCTGACAAGTCATCGACGCCTCTAATCCTTCCCCCTCTCCTTTTATAAACa > 2:715364‑M2/86‑149 (MQ=255) gcacctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATAGCAAGGTTGCGTCCACCTCTCCTTTTATAAACAGGAACGt < 1:775807‑M2/71‑1 (MQ=255) cctgattattgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTa < 2:696959‑M2/74‑1 (MQ=255) attgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCg < 2:137959‑M2/81‑1 (MQ=255) tgctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCa < 1:438301‑M2/83‑1 (MQ=255) ctacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGt > 2:200655‑M2/65‑149 (MQ=255) tacggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTa < 1:34775‑M2/86‑1 (MQ=255) acggcctgctggacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTCTTATAAACAGGAACGTCTATGATCCGCAGTAt > 2:321354‑M2/63‑149 (MQ=255) gacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGAt < 2:68584‑M2/30‑1 (MQ=255) gacgcatattgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGAt > 1:68584‑M2/52‑81 (MQ=255) ttgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGt > 1:764797‑M2/44‑149 (MQ=255) ttgaaatctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGt < 1:293627‑M2/106‑1 (MQ=255) ttgaaatctccggcttgaaacaaatgaggctgcgcattatacgCAGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTAGGATCCGCAGTATGCCCGCCTACGCGCAGcgc > 2:235276‑M2/44‑148 (MQ=255) taaatgcccgtcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGa < 2:736071‑M2/108‑1 (MQ=255) tctccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGAATGACGGCCTACGCCCGTCGTGAAATc > 2:176568‑M2/38‑149 (MQ=255) tccggcttgaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCTCGCCGTGAAATCaa > 2:771676‑M2/36‑149 (MQ=255) tccggcgagaaacagatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTTTGACCGCCTAAGCCCGCGGTACAATCaa > 2:536710‑M2/36‑149 (MQ=255) gaaacaaatgtggctgcgcattttacgCGGTTATTCCTTTCCTGACAATGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAAt < 2:86090‑M2/122‑1 (MQ=255) gaaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAAt < 2:26448‑M2/122‑1 (MQ=255) aaacaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATg > 1:486331‑M2/27‑149 (MQ=255) acaaatgtggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATggg > 1:319886‑M2/25‑149 (MQ=255) tggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGcc < 1:691410‑M2/94‑1 (MQ=255) tggctgcgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGcc > 2:691410‑M2/18‑111 (MQ=255) cgcattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGATATAATCCTTCCCCTTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCGACGCCCGGCGTGAAATCAAGGGTGAATGGGGGAGCGCAACCTg < 2:10028‑M2/138‑1 (MQ=255) cattatacgCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGAAGCGCAACCTggg > 1:198131‑M2/10‑149 (MQ=255) gCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGGAGCGCAACCTGGGAAATgcgc > 1:374047‑M2/2‑149 (MQ=255) | AATTCGACCAGCACCGAGCCTTCTGCATGTTTTGTATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGGACTTCCGGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGGAGCGCAACCTGGGAAATGCGC > NC_000913_3_bme_pgi/3816455‑3816750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |