New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437885 =2751 (0.620)342 (0.100) 147/204 9.4 13.9% intergenic (‑189/+233) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437880 2010 (0.560)intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 3080 total aligned reads displayed.

CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTT  >  CP016816/437758‑438013
                                                                                                                                   |                                                                                                                                    
cTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atata                                                                                                                                      >  1:7135843/1‑128 (MQ=255)
 ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat                                                                                                                                     >  1:948360/1‑128 (MQ=255)
    tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑a                                                                                                                                >  2:3120293/1‑128 (MQ=255)
     ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑at                                                                                                                               >  1:2803957/1‑128 (MQ=255)
        tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atata                                                                                                                            >  1:4690696/1‑128 (MQ=255)
         ttgtatttatttttCATTTTTAATATATATTAGATATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAACCAAAAAACTCCATATTACATATAGAGTTAAT‑‑T‑‑atatatat‑‑atatat                                                                                                                           <  2:1741938/117‑1 (MQ=255)
         acaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatat                                                                                                                           >  1:3270677/8‑128 (MQ=255)
           aGTTTTAATTTTAATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCTAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatat                                                                                                                         <  2:5711435/128‑1 (MQ=255)
           aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTAAAGAGTTAAT‑‑G‑‑atatatat‑‑atatatat                                                                                                                         >  2:231752/1‑128 (MQ=255)
            gttgttATTTTTATTTTTAATATATATTATAAATAAAAATTTTTTTTTTAAAATAAATATTTTATTAAATTAATAAAAGCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatata                                                                                                                        <  2:3633429/128‑1 (MQ=255)
               gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatat                                                                                                                     >  1:2492386/1‑128 (MQ=255)
               gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatat                                                                                                                     >  1:6204705/1‑128 (MQ=255)
               gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatat                                                                                                                     >  1:8261564/1‑128 (MQ=255)
                tAAGTATCATTTTTAAAAAATATTATAAAAAAAAAAAGTATTTATAAAATAAATATTTTATTAAAACAATCAAACCAAAAACCACCATAATACCTATAGAGATAAT‑‑G‑‑atatatat‑‑atatatatatata                                                                                                                    <  1:4960677/128‑1 (MQ=255)
                 aaGTTTCATTTTTTATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatatat                                                                                                                   >  1:9136301/1‑128 (MQ=255)
                  attttCATTTTTAATAAATATTAGATATATAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatatata                                                                                                                  <  2:6235944/126‑1 (MQ=255)
                  aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatatata                                                                                                                  <  1:2102288/128‑1 (MQ=255)
                    ttttATTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATTTAGCAAATCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatatatata                                                                                                                <  1:3143397/128‑1 (MQ=255)
                    tttCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATTAAGCAAAGCAAAAACCACCATAATACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatttatatatatata                                                                                                                >  2:7027350/1‑128 (MQ=255)
                    tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatatatatc                                                                                                                >  1:2970215/1‑127 (MQ=255)
                    tttAATTTTTTATATATATTTTATAAATAAATTTTTTTTTTAAAAAATATATTTTATTATATTAATCTAATCAAAAAAATCAATATTAAATATATAGATATT‑‑G‑‑atatatat‑‑atatatatatatatata                                                                                                                <  2:9357021/128‑1 (MQ=255)
                     ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatatatatca                                                                                                               <  2:1128170/128‑3 (MQ=255)
                         tttttAATATAAATTTTAAATATAATTTTTATTTTTAAAATAAATATATTATTTAATTAATAAAATCAAAAACAACAATATAAAATATATAGATAAT‑‑T‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑Gc                                                                                                         <  2:4490927/128‑1 (MQ=255)
                          ttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatatatataaaacct                                                                                                          >  2:671227/1‑122 (MQ=255)
                              aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatatatatatattaaatcg                                                                                                      >  1:3437544/1‑121 (MQ=255)
                              aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatatatatatatatgcaag                                                                                                      >  2:1963025/1‑121 (MQ=255)
                               ataaataTTAGAAATATAAATTGTATTTTTTAAATAAATATTTTTTTAAATGAATAAAAGCAAAAAACTCCATATTATCTATATATATAAT‑‑G‑‑ATATATAT‑‑ATATATAAATATATATATAT‑‑GCAAGCGa                                                                                                   <  2:7542328/128‑1 (MQ=255)
                                  aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCAt                                                                                            >  2:5242890/1‑128 (MQ=255)
                                   atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatatatatatatatatatacaagcgatc                                                                                                 >  2:417357/1‑116 (MQ=255)
                                    tattatAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATTAATCAAATCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGc                                                                                              <  2:213043/128‑1 (MQ=255)
                                    tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCTATCAGc                                                                                              >  1:1925694/1‑128 (MQ=255)
                                    tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCACCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATAT‑T‑TATATATTTATAT‑‑GCTAGCGATCAGCAt                                                                                            >  2:5076577/1‑128 (MQ=255)
                                      ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAAAATaa                                                                                          >  1:9312376/1‑128 (MQ=255)
                                      ttAGAAATAAAAATTGTATTTTTAAAATAAATATATTAGTAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGATAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                          <  1:176904/128‑1 (MQ=255)
                                       tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATAT‑T‑TATAT‑‑GCAAGCGATCAGCATaaa                                                                                         <  1:9634393/128‑1 (MQ=255)
                                        aGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAAGCAAATCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                          <  2:949966/128‑1 (MQ=255)
                                        aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                          <  1:7302375/128‑1 (MQ=255)
                                          ttttAAAAATACAATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTACAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATaaaa                                                                                        >  1:4048802/4‑128 (MQ=255)
                                          ataTAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAATCAAATAAAAAACCTCCATATTAACTATAGAGATAAT‑‑GATATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                          <  1:5608401/126‑1 (MQ=255)
                                             tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATATATATAT‑‑ATATATATATATATATATAT‑‑TCAAGCTATCACCATATAAt                                                                                       >  2:434028/1‑128 (MQ=255)
                                             tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATgg                                                                                     >  2:3336060/1‑128 (MQ=255)
                                               aataTTTTATATTTAAAATATATATTTTATTAAATGAATCAAATAAAAAACCTCTATAATAACTATAGAGTTATT‑‑T‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTg                                                                                   <  2:876070/125‑1 (MQ=255)
                                               aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACATATAGAGTTAAT‑‑‑‑‑‑TATATAT‑‑ATATATATATATATATATAT‑‑GCAATCGATCAGCATAAAAtttagaa                                                                                 >  1:6953680/1‑122 (MQ=255)
                                                aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCTAGCGATCAGCATAAAATGGTGa                                                                                  >  1:7881636/1‑128 (MQ=255)
                                                aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑AAAATCTATCAGCATAAAAttgata                                                                                  >  1:2653421/1‑123 (MQ=255)
                                                 aaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAA‑‑TCTAGCGAACAAAATAAAATgtataa                                                                                 >  1:8976350/1‑123 (MQ=255)
                                                  aTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GAAAGCGATCATCATAAAATTGTGAAAtt                                                                              >  2:2506793/1‑128 (MQ=255)
                                                    tGTATTTTTAAAATATATATTTTATGAAATGAATAAAAGAAAAAAACTACATATTACCTATAGATTTAAT‑‑T‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAAtt                                                                              <  2:4675845/128‑1 (MQ=255)
                                                      tATTTTTAAAATAAATATTTTATTAAAAGAAGCAAAGCAAAAACATCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTa                                                                            <  2:1332715/128‑1 (MQ=255)
                                                      tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAA‑GGTGTAAATTaa                                                                           >  2:8222457/1‑127 (MQ=255)
                                                         ttttAAAATAAATATTTTTTGAAATGAATCAAAGAAAAAAACTCAATATTAACTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGAt                                                                         <  1:2271008/128‑1 (MQ=255)
                                                         ttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GAAAGCGATCATCATAAAATTTTGAAATTTatatat                                                                       >  2:1507972/1‑126 (MQ=255)
                                                          tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatatat‑‑atatatat                                                                                                                         <  1:5299895/81‑1 (MQ=255)
                                                            tAAAATAAATATTTTAGGAAATGACTCAAAGCAAAAAACTCCATATTAACTATAGAGTTAAT‑‑‑‑‑‑TATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                    <  1:5453833/128‑1 (MQ=255)
                                                            tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGTTGATATTTAGTTCTg                                                                      >  1:8597181/1‑128 (MQ=255)
                                                            tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCACGCGATCAGCATAAAATGGTGATATTTAGATCTGAg                                                                    >  1:4815362/1‑128 (MQ=255)
                                                            tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑TCAAGCGATCAGCATAAAATTGTGAAATTTAGATATg                                                                      >  1:6769609/1‑128 (MQ=255)
                                                             aaaaTAAATATTTTATTATATGAATCAAATCAATAACATCAATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGa                                                                     <  1:6419770/128‑1 (MQ=255)
                                                              aaataaatATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTgg                                                                >  2:3794381/1‑128 (MQ=255)
                                                                 taaaaaTTTTAGTAAATGAAGCAAATCAAAAAACTCCATATTAACTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTg                                                                 <  2:9175908/128‑1 (MQ=255)
                                                                         ttAGGAAATGAAGCAAAGCAAAAATCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTg                                                     <  2:6918860/128‑1 (MQ=255)
                                                                         ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GAAAGATATCAGCATAAAATTGTAAAATATAGATCTGAGTTTGTCTTaaa                                                         >  2:7161016/1‑128 (MQ=255)
                                                                         ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAtt                                                       >  1:5911755/1‑128 (MQ=255)
                                                                         ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAt                                                        <  2:739227/127‑1 (MQ=255)
                                                                         ttAGGAAATGAAGCAAAGCAAAAACCTCCATATAACCTATAGAGTTAAT‑‑G‑‑ATATATATAAATATATATATATATAAATAT‑‑TCAAGCTATGAACATAAAATGGTGACATATATATCATAGTTGGACtaa                                                           >  2:3986887/1‑126 (MQ=255)
                                                                          tAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCTATCATAATAAAATTGTGAAATTTATATATGATTTTTTATTAAAttt                                                      >  2:8934896/1‑128 (MQ=255)
                                                                           aGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ACATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAtt                                                       <  1:843326/128‑1 (MQ=255)
                                                                            ttaaaTGAATAAAATCAAAAAACTCAATATTAAATATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                    <  2:2702202/126‑1 (MQ=255)
                                                                             taaaTGAATCAAAGAAAAAAACTCAATATTAACTATAGAGTTAAT‑‑T‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAAATTAGATCTGAGTTGGTCTTAAATTTg                                                     <  1:1569361/127‑1 (MQ=255)
                                                                             gAAATTAATAAAATCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTg                                                     <  1:4379591/128‑1 (MQ=255)
                                                                              aaaTGACGCACAGCAAAAACCTCGATAATACATAAAGAGTTACT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                    <  2:4847356/128‑1 (MQ=255)
                                                                              aaaTGAAGAAAATCAAAAAACTACATATTAACTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                    <  1:3676527/128‑1 (MQ=255)
                                                                                aTGAATCAAAGCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑GATATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                    <  1:5741162/128‑1 (MQ=255)
                                                                                 tGAAGCAAAGCTAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttt                                               <  2:5394776/128‑1 (MQ=255)
                                                                                  gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATTGTAATATTTAGATCTGAGTTGTTCTTAAATTTGTATtttt                                              >  1:4549969/1‑128 (MQ=255)
                                                                                  gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTAGGTCTTAAATTTGTAGTTttta                                            <  2:2889779/128‑1 (MQ=255)
                                                                                           caaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATATAAGCAAGCTCTCAGAATAAAATTGATATATATATATCTGTGTTGGTCTTAAATTTGTAGTTtttattt                                         >  1:8844638/1‑128 (MQ=255)
                                                                                           caaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCTCTCAGCATAAAATTGTGAAATATAGATCTGAGTTGGTCTTAAATTTGTTGTTTttatatat                                       >  1:1143269/1‑128 (MQ=255)
                                                                                           caaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt                                                      <  2:6590905/109‑1 (MQ=255)
                                                                                            aaaaaaCTCCATATTACCTATAGAGTTAATTAT‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattta                                        <  1:7657024/128‑1 (MQ=255)
                                                                                                 ccTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCCTCATAAAATGTTGAAATATAGATCTGAGTTGGTATTAATTTTGTATTTTTTATATATAGtttt                                 >  2:8041531/1‑127 (MQ=255)
                                                                                                  cTCCATATTACCTATAGAGTTAAT‑‑GATATATATAT‑‑ATATATATATATATATATAT‑‑GCACGCGATCAGCATAAAATGGTGAAATATAGATCTGAGTTGGTCTAAAATTTGTAGTTTTTATTTATAGtat                                  >  1:7473176/1‑126 (MQ=255)
                                                                                                   tacATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaaa                             >  2:5869672/3‑128 (MQ=255)
                                                                                                     cATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                         <  1:6612789/128‑1 (MQ=255)
                                                                                                          taacTATAGAGTTAAT‑‑G‑‑‑‑ATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATAGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                      <  2:6013137/125‑1 (MQ=255)
                                                                                                          tACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑TAAAGCTATCAGAATAAAATGGTGAAATTTATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAGTTTATATAGTaaa                        >  2:6443860/1‑128 (MQ=255)
                                                                                                           aCCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATAT‑GA‑‑‑GC‑‑GCGATCACAAAAAAATGGTGATATTTATATCTGAGTTTGTGTAATATTTGTTGTTTTTATATATAGTTTATATATTTAATAttt                   >  2:7777616/1‑128 (MQ=255)
                                                                                                               ataGAGTTAAT‑‑‑‑‑‑TATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAATTa                 <  1:1377014/128‑1 (MQ=255)
                                                                                                                  gagTTAAT‑‑GATATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGAATAAAATTGAGAAATTTAGATCTGAGTTGGTCTTATATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt                  >  1:8719836/1‑128 (MQ=255)
                                                                                                                  gagTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGTTGAAATATAGATCTGAGTATGTCTAAAATTTGTAGTTTTTATATATATTTTATAAAGATAATAAATTat                >  2:5557822/1‑127 (MQ=255)
                                                                                                                   agatAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa               <  1:3849939/125‑1 (MQ=255)
                                                                                                                         agttaaagatatat‑‑atatatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt             <  2:8617708/120‑1 (MQ=255)
                                                                                                                          tatttatatatat‑‑atatatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtta            <  1:8124599/123‑2 (MQ=255)
                                                                                                                          gatatatatataa‑‑atatatataattatttatat‑‑GCAATCGATTAGCATAAAATGGTGAAATATATATGAGATTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt            <  2:8404135/123‑1 (MQ=255)
                                                                                                                           agttaatgatat‑‑atatatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtttt           <  1:4212400/120‑1 (MQ=255)
                                                                                                                            tatatatatat‑‑atatatatatatatatatat‑‑GCAAGCGATAAGAATAAAATGGTGAAATTTATATCTGAGTTTTTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGTTAATAATATAGAttttt          >  1:6020823/4‑128 (MQ=255)
                                                                                                                                tatatat‑‑atatatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATTGTTTATAAAGTTTATAATTTATATTTTTAata      >  1:5131281/1‑128 (MQ=255)
                                                                                                                                  tatat‑‑atatatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATAtt    >  2:3466997/1‑128 (MQ=255)
                                                                                                                                   atat‑‑atatatatatatatatatat‑‑GCAAGCGCTCAGCATAAAATGGTTAAATTTAGATCTGAGTTGGTATTAAATTTTTAGTTTTTATTTATAGTTTATAAAGTTAATAATATAGATTTTTAATAttt   >  1:1001040/1‑128 (MQ=255)
                                                                                                                                   atat‑‑atatatatatatatatatat‑‑GCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAg                <  1:3562869/115‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                    
CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATATAT‑‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTT  >  CP016816/437758‑438013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.