| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 572,356 | IS2 (–) +5 bp | 54.1% | intergenic (+105/‑8) | ybcM → / → ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/uncharacterized protein, DLP12 prophage |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 381260 = | NA (NA) | 17 (0.370) | 15/548 | NT | 49.5% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 572356 = | 17 (0.380) | intergenic (+105/‑12) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/uncharacterized protein, DLP12 prophage | |||||
| * | ? | NC_000913 | = 382590 | NA (NA) | 23 (0.510) | 21/550 | NT | 57.0% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 572360 | 17 (0.380) | intergenic (+109/‑8) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/uncharacterized protein, DLP12 prophage | |||||
AATAACTTGTACGCCAAGGCGTGAACGCTGCCCGATATAACAACCTAATTTATCGCATCCGGTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGA‑AGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTC > NC_000913/380964‑381555 | aataaCTTGTACGCCAAGGCGTGAACGCTGCCCGATATAACAACCTAATTTATCGCATCCGGTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGAc < 2:344335/301‑1 (MQ=255) cAAGGCGGGAACGCTGCCCGAGATAACAACCGAAGTTATCGCATCCGGTAGCGATAATTCCCGCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAAtc < 1:61749/301‑1 (MQ=255) cTGCCCGATATAACAACCTAATTTATCGCATCCGGTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAACACCAATCTTTCCGCCATTGCTTATTATTGTTACAGGAAGCATAAAAGCATCAACAATAGACTTGCCCCCTGacactaccaccaaccca > 1:303022/1‑285 (MQ=255) ataACAACCTAATTTATCGCATCCGGTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCCTTGCTGATTATTGTGCCAGGACGAATCAACGCATAATTACTCGAc > 2:73384/1‑265 (MQ=255) cTAATTTATCGCATCCGGTAGCGATAATTCCCTCTGGAGTGCGAACAGACACTGGCTGTTCATCCAGACGATGAGTACTGGTACGTACGTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTg < 1:28205/301‑1 (MQ=255) cgccGGTACCGATAATGCCCTCTGGAGGTCGAACAGACACGGGCTGTTCAGCCCGACGATGACTACTGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATa < 2:256507/299‑1 (MQ=255) cGGTAGCGATAATTCCCTCTGGATTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCACTTAAATAACCGCATTTTTAATCTCCGTGGCCAAACCCATTTTTACGCCATTGCTGATTCTTCTGCCAGGACGAATCAACGCATAATTACTAGACTAGCACCCTGACTCTCCAGCCAACCAATATCACTTCACTAAGTGCTAGTCTTAATACTa > 2:265537/1‑301 (MQ=255) gtaggtagaagtCCCTCGGGAGTTCGAACAGACACGGGCTGGTCATCCAGACGATGATTACGGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTc < 1:85567/279‑1 (MQ=255) gTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAACCATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCCGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTATGCCCGGACTAATAAACGCATCATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATAGCCATTAAATAAGTGATAGTcctgctcctt > 2:85567/1‑290 (MQ=255) aaTTCCCTCTGGAGTGCGAACAGACACGGGCTGTTGAGCCAGACTATGATTACTGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATGTTTACGCCATTGCTGATTAGTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGAc < 1:265531/301‑1 (MQ=255) ttCCAAAAGATGATTACTGGTACTTACTTGTGCGCCTAAAGATGCCTGGTTTGAAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGc < 1:247125/300‑1 (MQ=255) aatggtgCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCTGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACcac < 1:194333/297‑1 (MQ=255) aaaTATGCCTGGTTTGCAACTACCGATTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAAGAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAAGAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGAt < 2:55507/301‑1 (MQ=255) aCCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAAtctc < 1:185737/154‑1 (MQ=255) aCCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCATGAAtctc > 2:185738/1‑154 (MQ=255) cAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAggg < 1:319950/232‑1 (MQ=255) gACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGCCAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACTGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTTAACCGGTGCTGCCGTTCTCCCt > 2:225680/1‑300 (MQ=255) aTTTTTACGCCATTGCTGATTATTGTGACAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAACTGAATGATAGTCTTAATACTAGTGTTTAGACTAGTCATTgg > 2:79831/1‑136 (MQ=21) aTTTTTACGCCAGTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTgg < 1:79831/136‑1 (MQ=255) tttttACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATAGCAATTGTTCAGCAGAGATTTGACCCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTTTAGCTGCCAGACAGTTATTTCTCTGCCGTAAGCAATaa > 1:319525/1‑300 (MQ=255) aCGCCATTGCTGGTTAATGTACAATGACGAATAAACGCATAGTTACTAGACTGGCCCCCTGAATCTCCAGGCAACCAATATCACTTAGTTAAGGATTAGTCTGAATACTAGTTTTTAGCCTAGTCATTGGAGAAAAGATGATTGATTTCTTAGGACCTGGGAAACGCAGACGGCGTACCACACAGGAAGAGATCGCAATTGTTCATCAGAGCTTTGATCCGGTGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCATCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCagga < 2:393650/301‑1 (MQ=14) aTTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACGTGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAgga‑aggaa > 2:55106/1‑301 (MQ=255) gttattattGTGCAAGGCCGAATAAACGCATAATTACGAGACTGGCCCCTTGAATTTTCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTGTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAACAGATCGCAATTGTTCAGCAGAGCTTTGAACCGTGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCCGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGA‑AGGAAGTc < 2:266401/297‑1 (MQ=14) gAATAAACGCATAATTACTAGACAGACCCCATGAATCTCCGGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGGTTGCTGTCTTCGGGCCGGAGAAACGCAGACGGCGTGCCACACAGGCGACGATCGCCATTGTTCAGCAGAGCTTTGAACCGGTGATGGCGGTCTACCTCGTTGCCCGGCAACATGGTTTAGCAGCCAGCCCGATAGTTCTCTGGCTGAGGCAAT‑CCAGGACAGGACATCTTActtgtcgcgccgacggg > 2:239760/1‑286 (MQ=11) ttACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGCTGATTGATGTCTTAGGGCCGGAGAAACGCAGGCGGCGTACCACACAGGAAAAGATCGCACTTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTCTTTCTCTGGCGTAAGCAATACCAGGA‑AGGAAGTATTCATACTGTACCCGCCGGAGACCAGGTTGTTc > 2:309789/1‑300 (MQ=11) ttACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGCAGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCCGCCAGCCAGTTATTTCTCTGGCGTACGCAATACCAGGA‑CGGAAGTCTTACTGCTGTCGCCGCCGGCGACCAGGTTGATc > 2:344205/1‑300 (MQ=2) | AATAACTTGTACGCCAAGGCGTGAACGCTGCCCGATATAACAACCTAATTTATCGCATCCGGTAGCGATAATTCCCTCTGGAGTTCGAACAGACACGGGCTGTTCATCCAGACGATGATTACTGGTACGTACTTGTGCGCCTAAATATGCCTGGTTTGCAACTACCGAGTCGGCAATAAAACATTGCGGACCAATCGTTGCTTCCGCTTCAATAACCGCATTTTTAATCTCGGTGGCAAAACCAATTTTTACGCCATTGCTGATTATTGTGCCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGA‑AGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTC > NC_000913/380964‑381555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |