New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 21441601 (0.010)40 (0.540)
+TGGTTTATCT
25/250 3.6 97.7% coding (484/1254 nt) sdrH Ser‑Asp rich fibrinogen/bone sialoprotein bindin protein SdrH
?CP000730 2144165 = 1 (0.010)coding (479/1254 nt) sdrH Ser‑Asp rich fibrinogen/bone sialoprotein bindin protein SdrH
Rejected: Coverage evenness skew score above cutoff.

TGACGGGTTAGGATTTGGCTTATTAGGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATCTGGATTTGGTTTCGGGTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTATCTGGATCTGGTTTAGGATTCGGACTT  >  CP000730/2144068‑2144305
                                                                                                       |                                                                                                                                            
cgACGGGTTAGGATTTGGCTCATTAGGGCCTGGTTTTGGCTTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATAAGGATTTGGATTCGGGTTata                                                                                                         >  2:774597/2‑140 (MQ=11)
                                                                      ggtgacgggttaggATTTGGCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTa                             >  1:326333/13‑141 (MQ=11)
                                                                         gacgggttaggATTTGGCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTTGGGTTatct                          >  2:809507/10‑141 (MQ=14)
                                                                           cgggttaggATTTGGCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTatctgg                        >  1:168999/8‑141 (MQ=14)
                                                                            gggttaggATTTGGCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTatctgga                       <  2:546520/135‑1 (MQ=14)
                                                                                 aggATTTGGCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTatctggatctgg                  >  1:302086/2‑141 (MQ=14)
                                                                                  ggATTTGGCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTATCTGGATCTGGt                 <  2:722002/141‑1 (MQ=14)
                                                                                  ggATTTGGCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTATCTGGATCTGGt                 <  2:112535/141‑1 (MQ=14)
                                                                                     tttGGCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTATCTGGATCTGGTTTa              <  1:146674/141‑1 (MQ=14)
                                                                                        ggCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTATCTGGATCTGGTTTAGGa           >  1:110015/1‑141 (MQ=17)
                                                                                            t‑‑‑atca‑‑‑GGGCCTGGCTTTGGCTTCGGATTTGGCGTTGGTTTATCTGGATTCGGTTTTGGATCCGGATTTGGCTTCGGTTTATCTGGGGCTGGGTTTGGATCCGGTGTTGGTTGCGGGTTATCTGGACCTGGTTTTGGATTCg       >  2:744337/1‑141 (MQ=9)
                                                                                                atta‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTATCTGGATCTGGTTTAGGATTCgg      >  2:908325/1‑141 (MQ=17)
                                                                                                   a‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTATCTGGATCTGGTTTAGGATTCGGACt   >  1:530991/1‑141 (MQ=17)
                                                                                                   a‑‑‑GGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTATCTGGATCTGGTTTAGGATTCGGACt   <  1:430260/141‑1 (MQ=17)
                                                                                                       gggTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTATCTGGATCTGGTTTAGGATTCGGACtt  <  2:588003/141‑1 (MQ=17)
                                                                                                       |                                                                                                                                            
TGACGGGTTAGGATTTGGCTTATTAGGGTCTGGTTTTGGATTCGGATTTGGCTTTGGTTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTT‑‑‑ATTA‑‑‑GGGTCTGGTTTTGGATCTGGATTTGGTTTCGGGTTATCTGGATCTGGTTTTGGATCCGGATTTGGCTTTGGTTTATCTGGGTCTGGTTTTGGATCCGGTTTTGGTTTCGGGTTATCTGGATCTGGTTTAGGATTCGGACTT  >  CP000730/2144068‑2144305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.