| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | DH1 | 163,135 | Δ95,041 bp | hokA–yhhJ | 83 genes hokA, cspA, yiaG, yiaF, ghrB, yiaD, bisC, yiaC, tag, yhjY, yhjX, eptB, ECDH1_RS00855, ECDH1_RS00860, dppA, ECDH1_RS00870, dppB, dppC, dppD, dppF, yhjV, ECDH1_RS00900, ldrD, bcsG, bcsF, bcsE, yhjR, ECDH1_RS00930, bcsA, bcsB, bcsZ, bcsC, yhjK, dctA, yhjJ, kdgK, ECDH1_RS00975, yhjH, yhjG, yhjE, yhjD, yhjC, yhjB, treF, yhjA, gadA, gadX, gadW, mdtF, mdtE, ECDH1_RS01045, gadE, hdeD, hdeA, hdeB, yhiD, dctR, slp, slp, insH1, ECDH1_RS01095, arsC, arsB, arsR, ECDH1_RS01115, ECDH1_RS01120, gor, rlmJ, prlC, rsmJ, tppB, uspA, uspB, pitA, yhiN, yhiM, ECDH1_RS01175, ECDH1_RS01180, ECDH1_RS01185, yhiJ, yhiI, rbbA, yhhJ |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | DH1 | 163135 | 258175 | 95041 | 570 [3] | [5] 582 | hokA–yhhJ | 83 genes hokA, cspA, yiaG, yiaF, ghrB, yiaD, bisC, yiaC, tag, yhjY, yhjX, eptB, ECDH1_RS00855, ECDH1_RS00860, dppA, ECDH1_RS00870, dppB, dppC, dppD, dppF, yhjV, ECDH1_RS00900, ldrD, bcsG, bcsF, bcsE, yhjR, ECDH1_RS00930, bcsA, bcsB, bcsZ, bcsC, yhjK, dctA, yhjJ, kdgK, ECDH1_RS00975, yhjH, yhjG, yhjE, yhjD, yhjC, yhjB, treF, yhjA, gadA, gadX, gadW, mdtF, mdtE, ECDH1_RS01045, gadE, hdeD, hdeA, hdeB, yhiD, dctR, slp, slp, insH1, ECDH1_RS01095, arsC, arsB, arsR, ECDH1_RS01115, ECDH1_RS01120, gor, rlmJ, prlC, rsmJ, tppB, uspA, uspB, pitA, yhiN, yhiM, ECDH1_RS01175, ECDH1_RS01180, ECDH1_RS01185, yhiJ, yhiI, rbbA, yhhJ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | DH1 | = 163134 | 3 (0.010) | 559 (1.210) | 239/298 | 0.0 | 99.3% | intergenic (‑51/‑29) | insJ/hokA | transposase/protein HokA |
| ? | DH1 | 258176 = | 5 (0.010) | intergenic (+92/+73) | yhhJ/yhhI | inner membrane transport permease YhhJ/H repeat‑associated protein yhhI | |||||
Only 100 of 582 total aligned reads displayed.
GCGCATTTTTCACCATTGCGCTGCTGCGATTCAGGAAGACGATTGGGACAATGGCGTAAATACAATTGCCCGATGCGTAAGCTTATAGGGACTACGCATCGGTGCAATTTATTGAATTTTAGTTGTTTTTAGGCCGGATAAGGCGTTTATGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCTTAA > DH1/258026‑258326 | agcaaaacgtgccgatatgatcctgtaaccatcatcagttgtgaagtagtgattcaggacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccatcaaaatgggtgcagtacatactg < 1:1782464‑M2/1‑1 (MQ=255)accaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactg > 7:309656‑M2/151‑151 (MQ=255)accaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactg > 4:726369‑M2/151‑151 (MQ=255) aaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactgaac > 3:1551674‑M2/148‑151 (MQ=255) aaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactgaact > 4:1320367‑M2/147‑151 (MQ=255) acgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactgaactgc > 1:560055‑M2/145‑150 (MQ=255) cgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGAc > 6:1429268‑M2/144‑151 (MQ=255) gccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGAcccc < 4:862336‑M2/11‑1 (MQ=255) cgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGAccccc > 3:1780021‑M2/139‑150 (MQ=255) gagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCa > 7:1498474‑M2/138‑150 (MQ=255) agatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacagactgacgccagatagttt < 3:657612‑M2/15‑14 (MQ=255) gatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCaaaa < 2:1726120‑M2/16‑1 (MQ=255) gatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCaaaa < 2:1624678‑M2/16‑1 (MQ=255) atgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAAc > 2:1663643‑M2/135‑151 (MQ=255) ctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGAc > 8:4662‑M2/129‑151 (MQ=255) taaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGt > 1:1214150‑M2/126‑151 (MQ=255) accatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGttt < 6:1753454‑M2/28‑1 (MQ=255) ccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTc > 8:1645972‑M2/123‑151 (MQ=255) ccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTc < 2:756022‑M2/29‑1 (MQ=255) catcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTc > 4:515573‑M2/122‑150 (MQ=255) atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTc > 6:1095880‑M2/121‑149 (MQ=255) atcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAg < 7:159088‑M2/31‑1 (MQ=255) catcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGt < 7:1039692‑M2/32‑1 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTa < 1:4129‑M2/34‑1 (MQ=255) tcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTa > 6:963797‑M2/117‑150 (MQ=255) tgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGc > 4:119159‑M2/112‑151 (MQ=255) gtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCt < 3:960075‑M2/41‑1 (MQ=255) gaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCttt > 7:747660‑M2/109‑151 (MQ=255) agtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCttttt > 3:496494‑M2/107‑151 (MQ=255) gtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTg > 2:325852‑M2/106‑151 (MQ=255) cacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAATCCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAg < 2:1306642‑M2/54‑1 (MQ=255) cacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGt > 2:1450037‑M2/97‑151 (MQ=255) cacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGt > 6:790892‑M2/97‑151 (MQ=255) acgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTc < 7:1402497‑M2/56‑1 (MQ=255) cgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGccc < 3:1001268‑M2/57‑1 (MQ=255) cttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGt > 8:1218747‑M2/92‑151 (MQ=255) ttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGCCCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTcgtgtt > 7:864790‑M2/91‑150 (MQ=255) tcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGt < 5:87249‑M2/60‑1 (MQ=255) cgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACAGGCTTTTTGATACTCAGTCCTGTATTCAggg > 1:771199‑M2/84‑151 (MQ=255) tttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCaa < 8:746899‑M2/71‑1 (MQ=255) tttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCa < 2:514993‑M2/70‑1 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGCCCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGAtt > 5:1741223‑M2/77‑151 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGAtt < 8:609919‑M2/75‑1 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGAt < 4:1816292‑M2/74‑1 (MQ=255) aaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGAtt > 8:1338068‑M2/76‑150 (MQ=255) aagggtattttggctttgacatattcggggcttttacatttcatcgtccaacaaaatgggtgcagtacattgtGAACTGACACCCAAAACCTGGAGAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCTAGATTACg < 4:420027‑M2/78‑1 (MQ=255) ggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGaaa < 6:258172‑M2/81‑1 (MQ=255) tattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGc > 4:1527709‑M2/69‑151 (MQ=255) tattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGc > 4:1077000‑M2/69‑151 (MQ=255) attttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGcc > 5:1565878‑M2/68‑151 (MQ=255) attttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGc < 2:887326‑M2/83‑1 (MQ=255) ttttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGccc > 6:382875‑M2/67‑151 (MQ=255) ggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTc > 1:959500‑M2/63‑151 (MQ=255) gctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTcc < 8:1768036‑M2/90‑1 (MQ=255) ctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCTCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTccc > 3:1638941‑M2/61‑151 (MQ=255) tgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCg < 6:1487212‑M2/93‑1 (MQ=255) tgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCg < 3:1159349‑M2/93‑1 (MQ=255) tgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGc > 3:301842‑M2/58‑151 (MQ=255) acatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGATTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACTAAAGCCCGCTCCCCGCa > 7:499385‑M2/56‑150 (MQ=255) catattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCa > 5:50772‑M2/55‑149 (MQ=255) catattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAg < 1:252280‑M2/97‑1 (MQ=255) catattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGACTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCa > 8:930192‑M2/55‑149 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGAc < 5:1176533‑M2/100‑1 (MQ=255) gggctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACg > 5:242270‑M2/47‑151 (MQ=255) gctattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGcc < 5:1056641‑M2/107‑1 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTACCCGGCGTTTTGATCCTCAGTCCTGTATTCAGGGCAAGATTACGAACGCCCGCTCCCCGCAAGGACTCACGCcac > 5:351704‑M2/43‑150 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGcc > 6:165036‑M2/43‑149 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATa < 3:424643‑M2/112‑1 (MQ=255) gAATTTTAGTTGTTTTTAGGCAGGATAAGGCGTTTATGAACTGACCCCCAAAACCTGGACAGTTTCACTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGt > 8:103720/1‑151 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGttt < 5:688302‑M2/116‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGttt < 8:1505583‑M2/116‑1 (MQ=255) tcatcgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTCACGCCAGATAGTTTCt > 2:1826028‑M2/34‑151 (MQ=255) cgtccaacaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTcc > 7:696105‑M2/30‑151 (MQ=255) acaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGgct < 1:3003‑M2/128‑1 (MQ=255) acaaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCCGTCCATGgct < 1:1042808‑M2/128‑1 (MQ=255) aaaatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGCGCAAGATTACGAAAGACCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGgctgc > 6:1828210‑M2/22‑151 (MQ=255) aatgggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCtt < 1:1380092‑M2/132‑1 (MQ=255) gggtgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTc > 1:854109‑M2/17‑151 (MQ=255) tgcagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGc > 1:1679315‑M2/14‑150 (MQ=255) cagtacatactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATc > 3:1275587‑M2/12‑151 (MQ=255) catactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACg < 7:1239233‑M2/145‑1 (MQ=255) atactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGt > 8:216187‑M2/6‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTacggc > 8:358564‑M2/5‑149 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 6:671849‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 2:1142052‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 2:388264‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 8:1394435‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 3:1382604‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 3:281532‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 5:1449755‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTc > 4:1218539‑M2/5‑151 (MQ=255) tactGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGAATCTTACGTc > 8:549297‑M2/5‑151 (MQ=255) actGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCt < 4:1598472‑M2/148‑1 (MQ=255) ctGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCtt > 6:1228623‑M2/3‑151 (MQ=255) tGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCtt > 6:534949‑M2/2‑150 (MQ=255) tGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCtt > 7:1187582‑M2/2‑150 (MQ=255) gAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCtt < 7:1845548/149‑1 (MQ=255) gAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCtt < 3:725299/149‑1 (MQ=255) gAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCTTa < 1:1471949/150‑1 (MQ=255) gAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCTTa > 2:1051459/1‑150 (MQ=255) | GCGCATTTTTCACCATTGCGCTGCTGCGATTCAGGAAGACGATTGGGACAATGGCGTAAATACAATTGCCCGATGCGTAAGCTTATAGGGACTACGCATCGGTGCAATTTATTGAATTTTAGTTGTTTTTAGGCCGGATAAGGCGTTTATGAACTGACCCCCAAAACCTGGACAGTTTCAGTTAACCGGCTTTTTGATACTCAGTCCTGTATTCAGGGCAAGATTACGAAAGCCCGCTCCCCGCAAGGACTGACGCCAGATAGTTTCTGTCCATGGCTGCTTTTCGCATCTTACGTCTTAA > DH1/258026‑258326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |