New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1469240	NA (NA)	78 (0.730)	57/296	1.5	94.0%	intergenic (‑91/‑1)	insC1/ydbA	IS2 repressor TnpA/pseudogene, autotransporter homolog; interrupted by IS2 and IS30
	?	NC_000913	= 1652258	5 (0.050)					pseudogene (708/1158 nt)	intQ	pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related

TTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAA  >  NC_000913/1469099‑1469387                                                                                                                                              |                                                                                                                                                    ttCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGAGAAATGGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCa                                                                                                                                              >  1:223549/1‑149 (MQ=12) tcccTGTGTGGTACCCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCa                                                                                                                                              <  2:277286/147‑1 (MQ=17)  tCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAATACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAg                                                                                                                                             <  1:87584/149‑1 (MQ=18)     tgtgtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTCTCTTAGGGATATTGGTTGTCTGGAGGTTCAGGGGGCCAGTCTAAACCCCAGAac                                                                                                                                          >  1:1739631/1‑149 (MQ=11)     tgtgtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGGCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAac                                                                                                                                          >  1:492847/1‑149 (MQ=25)        gtgGTTCGCCGTCTGCGTTTCTCCGGCCCTAAGACATCACTCATTTGTTCTCCAATGACTAGTCGAAAAACGAGCATTAAGACTATCGCTTATTTAAGTGATAGTCCTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAactta                                                                                                                                       <  2:653293/149‑1 (MQ=11)        gtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAactta                                                                                                                                       <  1:671536/149‑1 (MQ=38)        gtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGCCTCAACCCCAGAacttt                                                                                                                                       >  1:12255/1‑148 (MQ=255)         tgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCGATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAacttac                                                                                                                                      <  1:404272/149‑1 (MQ=255)         tgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAacttac                                                                                                                                      <  1:1038860/149‑1 (MQ=39)          ggTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACCCCCAGAacttact                                                                                                                                     <  2:1567924/149‑1 (MQ=255)            tACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTATAAACCCCAGAActtactta                                                                                                                                   >  2:1677781/1‑149 (MQ=255)             aCGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTAt                                                                                                                                  <  2:247953/149‑1 (MQ=255)              cGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATg                                                                                                                                 >  2:1118998/1‑149 (MQ=255)              cGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATg                                                                                                                                 <  1:1708122/149‑1 (MQ=255)              cGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTCGGCAGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATg                                                                                                                                 >  1:1660312/1‑149 (MQ=255)                ccGCCTGCCTCTCTCCGCCCCTAAGACGTGACTCATCTGTTCTCCAATGACTAGTCTAAAAACTGGTATTAAGACTATTACTTATTTAACTGATATTGGTTGTCTGGAGATTCAGGGTGCCAGTCTAAACCCCAGAACTTACTTATGCt                                                                                                                               <  2:219156/149‑1 (MQ=14)                  gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGa                                                                                                                             >  2:1032040/1‑149 (MQ=255)                  gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGa                                                                                                                             <  2:652655/149‑1 (MQ=255)                     tGCGTTGCTCCGGCCCTAGGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTc                                                                                                                          <  2:98058/149‑1 (MQ=255)                      gCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTcc                                                                                                                         >  2:1654597/1‑149 (MQ=255)                           tctcCGGCCCTAAGACAACAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGc                                                                                                                    <  1:1167054/149‑1 (MQ=255)                                  cccTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAAtt                                                                                                             <  2:571451/149‑1 (MQ=255)                                    cTAAGACATCAATCATCTGTTCTCCTATGACGAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTATCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGt                                                                                                           <  1:1101065/149‑1 (MQ=255)                                    cTAAGACACTAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAATTTACTTATGCTGATTCCGGTGCGAAAATTGt                                                                                                           <  2:353930/149‑1 (MQ=255)                                            tcaatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAg                                                                                                   <  1:573428/149‑1 (MQ=255)                                             caatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAgg                                                                                                  >  1:1702686/1‑149 (MQ=255)                                              aatcaTCTGTTCTCCAATGACTAGTCTAAGAACTAGTATTAAGACTATCACTTATTTAAGTGAGATTGGTTGTCTGGAGATTCAGGGGTCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGt                                                                                                 >  1:1158471/1‑149 (MQ=255)                                               atcatcTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTa                                                                                                <  1:1595213/149‑1 (MQ=255)                                               atcatcTGTTCTCCAATGACTAGTCTAAAAACCAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCGAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTa                                                                                                >  2:1279263/1‑149 (MQ=255)                                                tcgtcTGTTCGCCAATGACTATTCTCAAACCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTAc                                                                                               <  2:803303/146‑1 (MQ=21)                                                tcatcTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCGAGTCTAAACCCCAGAACTTACTTATGCTGATTTCGTTGCGAAAATTGTTAATAAAGGTAc                                                                                               <  2:1272027/149‑1 (MQ=255)                                                  atcTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGATACtt                                                                                             >  2:554635/1‑149 (MQ=255)                                                  atcTGTTCTCCAAGGACTAGTGTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTGATACTGATTCCGGTGCGAAAATTGCTAATAAAGGTACtt                                                                                             >  1:1262652/1‑149 (MQ=18)                                                    cTGTTCTCCAATGCCTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGGACTTACTTATGCTGATTCCGGTGCGAAAATTGTTATTAAAGGTACTTGt                                                                                           <  1:1277175/149‑1 (MQ=255)                                                    cTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTACTAAAGGTACTTGt                                                                                           <  2:1235178/149‑1 (MQ=255)                                                    cTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGt                                                                                           <  2:1485117/149‑1 (MQ=255)                                                    cTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGt                                                                                           <  1:1629545/149‑1 (MQ=255)                                                     tGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTa                                                                                          >  1:1555397/1‑149 (MQ=255)                                                      gTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATGGTTAATAAAGGTACTTGTaa                                                                                         >  1:736777/1‑148 (MQ=255)                                                          tcCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTc                                                                                     <  2:258404/149‑1 (MQ=255)                                                            cAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGAGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCaa                                                                                   >  2:885122/1‑149 (MQ=255)                                                               tGACTAGTCTAAAATCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTg                                                                                <  2:1473524/149‑1 (MQ=255)                                                                 aCTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGt                                                                              <  1:1251130/149‑1 (MQ=255)                                                                   tAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGCTTCAAGTGGTCa                                                                            >  2:879622/1‑149 (MQ=255)                                                                     gTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTGGTAGATTCAATTGGTCAAc                                                                          >  1:195966/1‑149 (MQ=255)                                                                      tCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATGGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACg                                                                         >  1:947197/1‑149 (MQ=255)                                                                        tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCa                                                                       >  1:805731/1‑149 (MQ=255)                                                                        tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCa                                                                       >  1:1613018/1‑149 (MQ=255)                                                                        tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCa                                                                       >  2:135109/1‑149 (MQ=255)                                                                        tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCa                                                                       >  2:305618/1‑149 (MQ=255)                                                                         aaaaaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCaa                                                                      >  1:1485501/1‑149 (MQ=255)                                                                         aaaaaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCaa                                                                      <  1:676638/149‑1 (MQ=255)                                                                         aaaaaCTAGGATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCaa                                                                      >  1:1768411/1‑149 (MQ=255)                                                                          aaaaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGAATCCATTGGTCAACGCAAc                                                                     >  2:88716/1‑149 (MQ=255)                                                                           aaaCTAGTATCAACGCTTTCACTTATTTATGTGAGACGGGTTGACTGGATGTTCGGGGGGCCAGTGTTAACCCCAGTACTTTCTTATGCTGATTCCGGTGCGAAAATTGTTTATAAAGGTACGTGTAGGTTCAATTGGTCAAGGCATCa                                                                    <  2:846678/149‑1 (MQ=255)                                                                                  tATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTAtgt                                                             >  2:860999/1‑149 (MQ=255)                                                                                    ttAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGa                                                           >  2:592263/1‑149 (MQ=255)                                                                                     tAAGACTATCACTCAAATAAGGAATATTCGTTGTCTGGAGATTCAGGGGGCCAGCCTAAACCCCAAAACTAACTTATCCTGATTCCGGCGCGAAAATTGTTAATAAAGGTACTAGTAGAATCAATTGGTCAACGCAACAGTTATGTGaa                                                          <  2:1355525/149‑1 (MQ=37)                                                                                       ccaatATCACTTAAATAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGaaaa                                                        >  2:1338614/5‑149 (MQ=255)                                                                                       agagTATCACTTATTTAAGTGATAGTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGaaaa                                                        <  2:1363624/149‑1 (MQ=255)                                                                                         aCTCTCACTTATTTAGGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACa                                                      <  2:1092476/149‑1 (MQ=255)                                                                                             tCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATggg                                                  >  1:1345341/1‑149 (MQ=255)                                                                                              cACTTACTTAAGTTATGTTGGTTGTCTGGAGAGTCAGGGGGCCAGTCTAAACCCCACAACTTACTTATGCGCATTCCGGTTCTAAAATTGTTAATAAAGGTACTTGTAGGTTCAATTGGTCAACGCAACAGTTATGTGAAAACATgggg                                                 <  2:669383/149‑1 (MQ=37)                                                                                                cTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTGGTAGATTCATTTGGTCAACGCAACAGTTATGTGAAAACATGGGGtt                                               >  2:1553275/1‑149 (MQ=255)                                                                                                cTTATTTAAGTGATATTGGATGTCTAAACATTCTGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGtt                                               >  2:650351/1‑149 (MQ=38)                                                                                                     ttAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGa                                          <  1:1203967/149‑1 (MQ=255)                                                                                                      taggTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAg                                         <  1:1671954/146‑1 (MQ=255)                                                                                                       aaGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTGTGTGAAAACATGGGGATGCGGAgg                                        >  1:1585833/1‑149 (MQ=255)                                                                                                       aaGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAACCATGGGGTTGCGGAgg                                        >  1:965362/1‑149 (MQ=255)                                                                                                       aaGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAgg                                        >  1:1278746/1‑149 (MQ=255)                                                                                                       aaGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTAAATTGGTCAGAGTATTAGTTATGTGAAACCATGGGGTTGGGGAgg                                        >  1:774936/1‑149 (MQ=38)                                                                                                        aGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGt                                       >  1:1341777/1‑149 (MQ=255)                                                                                                        aGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATGGTTAATAAAGGTACTTGAAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGt                                       >  2:161536/1‑149 (MQ=255)                                                                                                            atatTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTTGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTGGCGGAGGgtttt                                   >  2:713045/1‑149 (MQ=255)                                                                                                            atatTGGTTGTCTGGAGATTCAGGGAGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGttttt                                   >  2:771427/1‑149 (MQ=255)                                                                                                                tGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGaa                               <  1:885122/149‑1 (MQ=255)                                                                                                                tGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGaa                               <  1:367738/149‑1 (MQ=255)                                                                                                                tGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACACGGGGTTGCGGAGGGTTTTTGaa                               >  2:423537/1‑149 (MQ=255)                                                                                                                 ggTTGTCTGGATATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAAt                              <  1:488226/149‑1 (MQ=255)                                                                                                                     gTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATgaga                          <  1:1683115/149‑1 (MQ=255)                                                                                                                     gTCCGGAGATTCAGGGGGCCAGTCTAAATCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAATGTTATTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATgaga                          <  2:1739631/149‑1 (MQ=25)                                                                                                                      tCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGAc                         <  2:1712938/149‑1 (MQ=255)                                                                                                                       cTGTAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTGCTTGTGCTGATTCCGGTGCGAAAATTGTTAATAAAGATACTGGTAGATTCAATGGGTCAACGCAACAGTTATGTGAAAACATGGGGGTGCGAAGGTTTTTTGAATGAGACg                        >  2:579068/1‑149 (MQ=25)                                                                                                                        tGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTGGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGa                       >  2:1109658/1‑149 (MQ=255)                                                                                                                         ggAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGaa                      >  2:1124992/1‑149 (MQ=255)                                                                                                                         ggAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGGTTTTTGAATGAGACGaa                      >  1:1390550/1‑149 (MQ=255)                                                                                                                         ggAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATGCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGaa                      >  2:900813/1‑149 (MQ=255)                                                                                                                            gagtCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGATGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGTTTTTTTGAATGAGACGAACAt                   <  1:1264715/146‑1 (MQ=255)                                                                                                                              ttCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTGTTTTGAATGAGACGAACAttt                 >  1:446072/1‑149 (MQ=255)                                                                                                                                 aGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTCGCGGAGGTTTTTTGAATGAGACGGACGtttgcg              >  1:1039067/1‑146 (MQ=255)                                                                                                                                             tAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGGGGAGGTTGTGTGAATGAGAGGAACATTTACAGGCGAGGaaaag  >  1:1412699/1‑148 (MQ=25)                                                                                                                                             tAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGaaaaa  >  2:804196/1‑149 (MQ=255)                                                                                                                                              |                                                                                                                                                    TTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAA  >  NC_000913/1469099‑1469387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.