New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1469240	NA (NA)	78 (0.730)	57/296	1.5	94.0%	intergenic (‑91/‑1)	insC1/ydbA	IS2 repressor TnpA/pseudogene, autotransporter homolog; interrupted by IS2 and IS30
	?	NC_000913	= 1652258	5 (0.050)					pseudogene (708/1158 nt)	intQ	pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related

TTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1469098‑1469240 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAGCTCACCAGGG  <  NC_000913/1652258‑1652117                                                                                                                                                                                                                                                                                               TTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGCTATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTGCTTAAT                                                                                                                                          >  2:50940/1‑149     CTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGA                                                                                                                                      <  1:262623/149‑1      TGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGAT                                                                                                                                     >  2:1063771/1‑149        TGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTCGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGA                                                                                                                                   <  1:75212/149‑1          TGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAGAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAAT                                                                                                                                 >  2:1431353/1‑149             TACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGAC                                                                                                                              >  1:818439/1‑149              gCGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACC                                                                                                                             <  2:145303/148‑1              ACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAGAAACTAGGATTACGCCTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTGATAAGATGAATGACC                                                                                                                             >  1:864198/1‑149                  CGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTCAGGTCACTTTGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGAT                                                                                                                         >  1:857019/1‑149                       tCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGGGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTT                                                                                                                    >  1:308144/2‑149                        CGTTTCTCCGGCCCTAAGTCATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTC                                                                                                                   <  1:404582/149‑1                              TCCGTCCCTAAGACATGAATCATCTGTCCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTGCCCGCCT                                                                                                             <  2:835737/149‑1                               CCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTG                                                                                                            <  2:1498180/149‑1                                    CCTAAGACATCAATCATCTGTTCGCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTT                                                                                                       <  2:993318/149‑1                                     CTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTT                                                                                                      <  1:608866/149‑1                                     CTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTT                                                                                                      <  2:154352/149‑1                                     CTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTAGCACTTATTTAAGTGATAGTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAGGATGAATGCCCCGATTGGTTCCCGCCTGTGTTTT                                                                                                      <  2:1350920/149‑1                                       AAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAATATATTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTG                                                                                                    <  1:776254/149‑1                                       AAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTa                                                                                                    <  2:1548703/149‑2                                       AAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTG                                                                                                    <  1:621766/149‑1                                       AAGACACCAATCATTTGTTCTCCAATGACTATTCTAAAAATTAATATTAAGACTACTACTTATTTAAGTGATATTGGTTGTCGGGAGATTCAGGGGGCCAGCCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTG                                                                                                    <  2:672482/149‑1                                        AGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGG                                                                                                   <  1:989203/149‑1                                          ACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGTGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTA                                                                                                 >  2:954070/1‑149                                            ctccataATCTGGTCTAAAACGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACC                                                                                               >  2:1723898/8‑149                                            ATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACC                                                                                               >  1:526408/1‑149                                              CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGT                                                                                             >  1:192609/1‑149                                                tTCATCTGTTCTCCAACGACGAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGA                                                                                           <  2:158463/148‑1                                                 TCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGGCCCGATTGGTTCCCGCCTGTGTTATTGTTCCCGTGca                                                                                          >  2:409909/1‑147                                                 TCATCTGCTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAA                                                                                          >  1:1179018/1‑149                                                  CATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAA                                                                                         <  1:465119/149‑1                                                  CATCTGTGCTTCCATGACCAGTCTAAAATCTAGTAGTAAGACTATCACTTATTTAAGTGCTATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAca                                                                                         <  2:774596/149‑3                                                    TCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAATCG                                                                                       >  2:1778260/1‑149                                                    TCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGGGTTTTTGGTACCGTGAAACG                                                                                       <  2:1274851/149‑1                                                          CTCCAATGACAAGTCTAGAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTATACTTAATAAGCTGAATGACCCGATTGGTTCCCGCCTGTGGTTTTGGTACCGTGAAACAGTCTTT                                                                                 >  2:1319663/1‑149                                                           TCCAATGGCTAGTCTAAAAACTAGTATTAAGCCTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTT                                                                                <  1:438624/149‑1                                                           TCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTT                                                                                <  1:438713/149‑1                                                            CCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTG                                                                               <  1:1644425/149‑1                                                            CCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTG                                                                               <  1:159175/149‑1                                                             CAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGTTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGATACCGTGAAACGGTCTTTTGC                                                                              >  2:1389007/1‑149                                                             CAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAACCGGTCTTTTGC                                                                              >  1:278982/1‑149                                                             CAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGC                                                                              >  2:119367/1‑149                                                               ATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTA                                                                            <  2:1305803/149‑1                                                                    TAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTCGTTGTCTGCGGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATAGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTGTTTTGCTGAATTT                                                                       >  2:864598/1‑149                                                                       TCTAAAAACTGGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCCGTCTACTTATTAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACTGTCTTTTGCTAAATTTCTC                                                                    >  2:1521442/1‑149                                                                         TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTGTTTTGCTAAATTTCTCCT                                                                  >  2:277226/1‑149                                                                         TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCT                                                                  >  1:230522/1‑149                                                                           AAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAACGACCCGATTGGTTCCCGCCCGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGA                                                                <  2:1626825/149‑1                                                                            aatCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGCTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGAT                                                               <  1:1435887/146‑1                                                                              cCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCA                                                             <  1:1351631/148‑1                                                                              ACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCA                                                             <  1:611897/149‑1                                                                                     TTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGT                                                      >  2:218287/1‑149                                                                                     TTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGT                                                      >  1:718479/1‑149                                                                                       AAGACTATCACTTATTTAAGTGATATTGGTACAAAAAAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTC                                                    >  1:1762900/1‑149                                                                                         GACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCTGTCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCA                                                  <  1:52151/149‑1                                                                                              TCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTT                                             <  1:906786/149‑1                                                                                                tccTATTTACGTGATATTGGTTGGCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGCTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCGAAATTTCTCCGGATCATCATTGTTCCATTTTTCA                                           <  2:466274/146‑1                                                                                                gCTTATGTAAGTGGTATTGGTTGTCTGGGGATCCAGGGGGCCAGTGTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCA                                           <  2:195865/148‑1                                                                                                 CTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAG                                          >  1:1481351/1‑149                                                                                                       TAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTAT                                    <  2:1499443/149‑1                                                                                                          GTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTC                                 <  1:258699/149‑1                                                                                                           ggcTATTGGTTGTCTGGAGATTCAGGGCGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTCCCCGCCTGTGTTTTTGGTCCCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCAATGTCC                                <  2:308144/146‑1                                                                                                               ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTTGTTCCCGCCTGTGTTTTTGGTACCGTCAAACGGTCTTTTGCTAAATTTCTCCTGAGGAGCATTGTGCCATTTTTCAGATCTATGTCCTCCC                            <  2:386093/149‑1                                                                                                                TTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCA                           >  2:850693/1‑149                                                                                                                    TTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCA                       >  1:1497194/1‑149                                                                                                                    TTGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCA                       >  2:491126/1‑149                                                                                                                     TGTCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGCCCAGCTTGGAACCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAA                      <  1:50940/149‑1                                                                                                                       TCTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGT                    <  1:1732115/149‑1                                                                                                                        CTGGAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTG                   <  1:1723898/149‑1                                                                                                                           GAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCAC                >  1:1408002/1‑149                                                                                                                           GAGATTCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTGTTCAGATCTATTTCCTCCCATCCAAGTGCAC                >  2:1394318/1‑149                                                                                                                           GAGATTCAGGGGGCCAGTCTACTTAATAACATGAATGACCCGATTGGTTCCCGCCTGTGTTATTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGTTCTATGGCCTCCCATCCAAGTGCAC                >  1:1091986/1‑149                                                                                                                               TTCAGGGGGGCAGTCCACTTAATAAGATCAATGACCCGCTTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGTTCCTCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAG            <  1:761152/149‑1                                                                                                                                TCAGGGGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTCCACACAGC           >  2:1436452/1‑149                                                                                                                                     GGGCCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAGCTCACC      <  1:1675006/149‑1                                                                                                                                        CCAGTCTACTTAATACGAGGAACGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAGCTCACCAGG   <  1:184081/149‑1                                                                                                                                        CCAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAGCTCACCAGG   <  1:715512/149‑1                                                                                                                                         CAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTCCCGTGAAACGGTCTTTTGCTAAATTTCTCCTGCTCATCGTTGATCACTTTTTCGGATATCTGTCCTCCCATCCGAGTGCACGCAGCTCTCAAGGG  >  2:500244/1‑149                                                                                                                                         CAGTCTACTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAGCTCACCAGGG  <  1:576587/149‑1                                                                                                                                                                                                                                                                                               TTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1469098‑1469240 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTAATAAGATGAATGACCCGATTGGTTCCCGCCTGTGTTTTTGGTACCGTGAAACGGTCTTTTGCTAAATTTCTCCTGATCATCATTGTTCCATTTTTCAGATCTATGTCCTCCCATCCAAGTGCACACAGCTCACCAGGG  <  NC_000913/1652258‑1652117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.