New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1397238NA (NA)44 (1.050) 34/284 0.2 95.7% intergenic (+146/‑127) insH1/ynaJ IS5 transposase and trans‑activator/DUF2534 family putative inner membrane protein
?NC_000913 1755755 = 2 (0.050)coding (58/1413 nt) pykF pyruvate kinase I

TTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGCTTGATAC  >  NC_000913/1755613‑1755897
                                                                                                                                              |                                                                                                                                              
tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct                                                                                                                                                >  2:383182‑M2/143‑143 (MQ=255)
 ttCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAACACCAAAACTACTCCCCCCATCGGACCGAAAACCGAATCTGAAGAGATGtt                                                                                                                                               <  2:697337/143‑1 (MQ=255)
 ggggataacgcctgagatggcgaagaagcggtcgagataggctgattcaaggcatttacgggagaaacaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattgccccgcttattcgcaccttcctt                                                                                                                                               <  1:47239‑M2/2‑1 (MQ=255)
  tCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTa                                                                                                                                              <  1:592154/143‑1 (MQ=255)
  gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa                                                                                                                                              >  1:335457‑M2/141‑143 (MQ=255)
    gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGc                                                                                                                                            >  2:697068‑M2/139‑143 (MQ=255)
        tACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACAAAGACTGTCATGAAAAAGACCAAAATTGTGTGCACCAGCGGACCGAAGAGCGAATCGGCAGAGAGGTGAGggaag                                                                                                                                        >  1:274337‑M1/1‑138 (MQ=255)
          gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAAt                                                                                                                                      >  2:445287‑M2/133‑143 (MQ=255)
               ttCGCTTGCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaa                                                                                                                                 <  2:560731‑M1/143‑13 (MQ=255)
                 cGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaaca                                                                                                                               <  1:229213‑M1/143‑15 (MQ=255)
                    gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTAAAATCCTGGACGCt                                                                                                                            >  1:114367‑M2/123‑143 (MQ=255)
                     cgaagaaaagctctaaataggctgattgaaggcatctacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattcccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTg                                                                                                                           <  1:23554‑M2/22‑1 (MQ=255)
                       aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGc                                                                                                                         <  2:236220‑M2/24‑1 (MQ=255)
                         gaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCAt                                                                                                                       >  2:603864‑M2/118‑143 (MQ=255)
                                       aaaGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                         <  1:128111‑M1/143‑37 (MQ=255)
                                        ggctaattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCt                                                                                                        <  1:20855‑M2/41‑1 (MQ=255)
                                         gctgattcaaggcatttacgggagaaaaaatcggctcaaccatgaacaaatgaaatgactgagtcagccgacaagaatttccccgcttattcgcaccttacTTAGCTAACACGCTGGCCGCTGGTAGCAACGtgatgccggtt                                                                                                       >  1:726053‑M2/102‑138 (MQ=255)
                                         gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTg                                                                                                       >  1:215747‑M2/102‑143 (MQ=255)
                                         gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgaacactccTTAGCTAAAATGCTCGACGCTGGCATGAACGTTATGCGTCTg                                                                                                       >  1:322913‑M2/102‑143 (MQ=255)
                                         gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagacagcccaggagaatttccccgcttattcgcaccttccTCAGCTAAAATGCTGTCCCCTGgcacggacgttccgcctcta                                                                                                       >  1:507778‑M2/102‑134 (MQ=255)
                                         gcggagtcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatgtcccggcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTg                                                                                                       <  2:275496‑M2/42‑1 (MQ=255)
                                          ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTCGACGCTGGCATGAACGTCATGCGTCTGa                                                                                                      >  1:651849‑M2/101‑143 (MQ=255)
                                              ttcaacgcatttacgcgagaacaactcggctcaaacatgaagaaacgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCGGGCATGAACGTTATGCGTCTGAACtt                                                                                                  <  2:221272‑M2/47‑1 (MQ=255)
                                                  aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTtctct                                                                                              >  2:17038‑M2/93‑143 (MQ=255)
                                                       tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATgg                                                                                         <  1:361384‑M2/56‑1 (MQ=255)
                                                       aTCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCGGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                         >  1:712396‑M1/1‑91 (MQ=255)
                                                            gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACt                                                                                    <  1:405034‑M2/61‑1 (MQ=255)
                                                             ggagaaaaaatcggcgcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTa                                                                                   <  2:143916‑M2/62‑1 (MQ=255)
                                                              gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTACCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTAt                                                                                  >  2:431477‑M2/81‑143 (MQ=255)
                                                                gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGc                                                                                >  2:598573‑M2/79‑143 (MQ=255)
                                                                gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTGAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGc                                                                                <  1:74219‑M2/65‑1 (MQ=255)
                                                                aaCTTAAAGACTAAGCCTGTCATGACAAGGATAATAATTAGCTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                >  1:717939‑M1/1‑82 (MQ=255)
                                                                aaCTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                >  2:487932‑M1/1‑82 (MQ=255)
                                                                 aCTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                               <  1:388682‑M1/143‑63 (MQ=255)
                                                                 aCTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggcgcgcacaagtccctgatatgagatcatgcttgtcatcgggagccatagaacaggg                                                                               >  1:652323‑M1/1‑81 (MQ=255)
                                                                         actaagactGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGACAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagcacagggttcatcgt                                                                       >  2:318297‑M1/1‑73 (MQ=255)
                                                                          gcgcaaacatgaaggaatgaaattactgagccagccgagaagaatttccccgcttattcgcaccttccTTAGCTTAATTGCTGTACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGt                                                                      <  1:122068‑M2/75‑1 (MQ=255)
                                                                           taagactGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttactcttgt                                                                     <  2:538771‑M1/143‑73 (MQ=255)
                                                                            tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAAcacgggcc                                                                    >  1:639059‑M2/67‑140 (MQ=255)
                                                                              aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTGGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCGGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAgc                                                                  >  2:364483‑M2/65‑143 (MQ=255)
                                                                               actGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                                                                 <  2:528056‑M1/143‑77 (MQ=255)
                                                                                          aaaGACCAAAAGTGTTTGCACCATCGGACCGAAAACCGAATCGGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggtgccatagaacagggttcatcatgagtcatcaacttacct                                                      <  2:311338‑M1/143‑88 (MQ=255)
                                                                                           tgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCt                                                     <  2:178467‑M2/92‑1 (MQ=255)
                                                                                             agagggctgtgtcagccgagaagaattttcccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTgc                                                   <  1:565578‑M2/94‑1 (MQ=255)
                                                                                             aaatgagtgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGAATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGCATCTgc                                                   <  2:259883‑M2/94‑1 (MQ=255)
                                                                                                  actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTTGCATGAACGTTATGCGTCTGAACTTCTCTGATGGTGACTATGCAGAACACGGGGAGCGCGTTCAACATCTGCgcaga                                              >  2:82088‑M2/45‑141 (MQ=255)
                                                                                                        tttGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                        >  2:687789‑M1/1‑42 (MQ=255)
                                                                                                          tGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgtgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                      >  2:31996‑M1/1‑40 (MQ=255)
                                                                                                               cATCGGACCGATAACCGAATCTGATGTGATGTTCGgggaggtggcaacaggtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                 <  2:608357‑M1/143‑109 (MQ=255)
                                                                                                               cATCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                 <  2:712396‑M1/143‑109 (MQ=255)
                                                                                                                aTCGGACCGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag                                >  2:621103‑M1/1‑34 (MQ=255)
                                                                                                                 aagaatttctgcgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGGCTGAACTTCTCTCATGGTGGCTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACt                               <  1:57860‑M2/114‑1 (MQ=255)
                                                                                                                   ggACCGAAATCCGAATATGAGGAGATGTTAGggagggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcaccgacagtgaattcagcagtaa                             <  1:214662‑M1/143‑113 (MQ=255)
                                                                                                                   gaatttccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCTCATTCAGAATCTGCGCAACGTGATGAGCCAAACTgg                             >  1:288781‑M2/28‑143 (MQ=255)
                                                                                                                    gACCGAAAACCGAATCTGAAGAGATGTTAGggaacgtgcgaacaagtccctgatataagatcatattagtcatatggagccatagaacagggatcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag                            >  2:44021‑M1/1‑30 (MQ=255)
                                                                                                                    catttccccgcttattcgcaccttccTTAGCTAAAATTCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGt                            <  1:98941‑M2/117‑1 (MQ=255)
                                                                                                                    aatttccccccttattcgcatctttcTTAGCTATAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATTGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGt                            <  1:405271‑M2/117‑1 (MQ=255)
                                                                                                                     agatccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGACCGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGAGATCAGAAAAActggga                           >  1:159954‑M2/26‑141 (MQ=255)
                                                                                                                       cGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagcaagcgc                         >  1:338460‑M1/1‑27 (MQ=255)
                                                                                                                       cGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtcaattcagcagtcagcgc                         >  2:585678‑M1/1‑27 (MQ=255)
                                                                                                                       cGAAAACCGAATCTGAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacattcgccgacagtgaattcagcagtacgccc                         >  1:242084‑M1/1‑27 (MQ=255)
                                                                                                                         ccccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCCACGGGAGGACCAAAACTAGAAAAAc                       >  1:35260‑M2/22‑143 (MQ=255)
                                                                                                                           ccgcttattcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAAccg                     >  1:450947‑M2/20‑143 (MQ=255)
                                                                                                                             gcgtattcgcacctcccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAAccgcc                   <  1:587810‑M2/126‑1 (MQ=255)
                                                                                                                                   tcgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATc             >  2:498195‑M2/12‑143 (MQ=255)
                                                                                                                                    cgcaccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAGCGTGATGAGCAAAACTGGTAAAACCGCCGCTAAcc            >  1:240602‑M2/11‑143 (MQ=255)
                                                                                                                                     gAAGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaactcagcagtaagcgccgtcagaccagcaa           >  1:255826‑M1/1‑13 (MQ=255)
                                                                                                                                     gAAGAGATGTGAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa           <  2:353898‑M1/143‑131 (MQ=255)
                                                                                                                                      caccttccTTAGCTAAAATGCTGGACGTTTGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTg          <  1:334469‑M2/135‑1 (MQ=255)
                                                                                                                                      caccttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCAATCCTg          >  1:650549‑M2/9‑143 (MQ=255)
                                                                                                                                      aaGAGATGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagagaa          >  1:59134‑M1/1‑12 (MQ=255)
                                                                                                                                       accttccTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGc         <  1:17038‑M2/136‑1 (MQ=255)
                                                                                                                                              ttAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagagaattcagcagtaagcgccgtcagaccagaaaagagatcat  >  1:566162‑M1/1‑4 (MQ=255)
                                                                                                                                              |                                                                                                                                              
TTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGCTTGATAC  >  NC_000913/1755613‑1755897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.