| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 4 (0.130) | 23 (0.770) | 23/284 | 0.3 | 85.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 4 (0.130) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTG > NC_000913/4001518‑4001779 | atcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttctt > 1:132372‑M2/132‑143 (MQ=255)acgttggcgaacgggacgacgacgagcgactgcgcgtacaatcggaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctctgaagacgacgacggcctgcagCTCcttcttctt < 2:347332‑M2/12‑1 (MQ=255) tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaacacatcgaagcatcggcacgtttctttgcagacgacgacgccctgcatCTCcttcttcttc > 1:65342‑M2/131‑143 (MQ=255) cggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc < 2:19627‑M2/24‑1 (MQ=255) agacgacgagcgactgcgcgtacaatctgaacttggccagagccttgcaacccgcccgcaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 2:317139‑M2/28‑1 (MQ=255) caaggagcgactgcgaggacagtctgaactagaccagagccgggcaacccgcccggaactggaagacatcgaagcaccggcacgtttctttgcagacgacgacggcctgcatCTCCTTCTTCTTCTTGCAAGATGCGGAAGAt < 1:281694‑M2/31‑1 (MQ=255) ggcgtacactctgaccttggccagagcctggcaaccctcctggatccggaagatatcgaagcatctgcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACt < 1:281253‑M2/44‑1 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTAGCAGGCCAAGACGCACCGGCACGTTTCATAAATTTATCTGTTTACCTGCAT‑‑‑‑‑CTCCTTCTTCTCCTTGGACGGTGCGGAAGATCACGCCGGTAACTCCACTGTgg > 2:525118/1‑143 (MQ=255) gAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACTAC‑‑‑‑GCAAGAATATGCA‑AGTATCGTCTTCTTTGAAGTTGCGGAAGGTCACGCCGGTACCTCGACTGTGGcgt > 2:382187/1‑141 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCCCCGGGGCa > 2:43385‑M2/89‑143 (MQ=255) tgaactgggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa < 2:251604‑M2/55‑1 (MQ=255) gaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACGCAACTGGGGCAt > 2:38816‑M2/88‑143 (MQ=255) cagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCCCGCCGGTAACTCCGCTGTGGCATTTACCATcc > 2:114059‑M2/79‑143 (MQ=255) agcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgaagacggcctgcatCTCCTTCTTCTTTTTTTAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGATATCTATCATCCGTg > 1:55926‑M2/76‑143 (MQ=255) cctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagaagacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATAACGCCGGTAACTCCGCCGGGGCATTTGACAAGCGTGAt > 2:276937‑M2/74‑143 (MQ=255) cccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt < 2:132372‑M2/78‑1 (MQ=255) ccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa < 2:410931‑M2/83‑1 (MQ=255) gAAGACATCGAAGCATCGGCACGTTGCTTTGAAGACGACGACGGCCCGC‑‑ATT‑‑‑TCCTTCTTCTTCTGTGAAGCTGCGGAAGATCACGCCGGTAACACCACTGGGGCATTTGGGATCCGCGATGGTCGGCTGTGTAGTCGgagtg > 2:178003/1‑143 (MQ=255) gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATA‑TAACT‑CTACCTGGT‑GGTGCATAT‑‑GGTTGTTGGCACCCCAAACCCCACTGTGGCATTTACCATACGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc > 2:525096/1‑143 (MQ=255) aagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACt > 2:332837‑M2/42‑143 (MQ=255) catcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGcc > 2:211242‑M2/39‑143 (MQ=255) gtttctttgaagacgacgacggcctgcatCGCCTTCTTCTTCTTAGAAGAAGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCg > 2:184655‑M2/30‑143 (MQ=255) ttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTc < 2:525933‑M2/116‑1 (MQ=255) cttgaagacgacgacggcctgcatCTCCCTCTTCTGCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGt < 2:482952‑M2/119‑1 (MQ=255) ttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTTAGCGTGAACTGCCCGCTTTCCGTCTGTa > 2:288509‑M2/24‑143 (MQ=255) tgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGACCTGCCCGCGTTTCGTCTGTAt > 2:236662‑M2/23‑143 (MQ=255) gacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTg > 1:312423‑M2/13‑143 (MQ=255) | GTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTG > NC_000913/4001518‑4001779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |