| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 4 (0.130) | 23 (0.770) | 23/284 | 0.3 | 85.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 4 (0.130) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
ATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAT > NC_000913/4001513‑4001774 | acgttggcGAACGGGACGACGACGAGCGACTGCGCGTACAATCGGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTCTGAAGACGACGACGGCCTGCAGctccttcttctt < 2:347332‑M1/140‑13 (MQ=255)aTCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctt > 1:132372‑M1/1‑131 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAACACATCGAAGCATCGGCACGTTTCTTTGCAGACGACGACGCCCTGCATctccttcttcttc > 1:65342‑M1/1‑130 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc < 2:19627‑M1/143‑25 (MQ=255) agacgacgagCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTTGCAACCCGCCCGCAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 2:317139‑M1/142‑29 (MQ=255) caaggagcgaCTGCGAGGACAGTCTGAACTAGACCAGAGCCGGGCAACCCGCCCGGAACTGGAAGACATCGAAGCACCGGCACGTTTCTTTGCAGACGACGACGGCCTGCATctccttcttcttcttgcaagatgcggaagat < 1:281694‑M1/139‑32 (MQ=255) ggcgtACACTCTGACCTTGGCCAGAGCCTGGCAACCCTCCTGGATCCGGAAGATATCGAAGCATCTGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaact < 1:281253‑M1/142‑45 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTAGCAGGCCAAGACGCACCGGCACGTTTCATAAATTTATCTGTTTACCTGCAT‑‑‑‑‑CTCCTTCTTCTCCTTGGACGGTGCGGAAGATCACGCCGGTAACTCCACTGTgg > 2:525118/1‑143 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcccccggggca > 2:43385‑M1/1‑88 (MQ=255) tGAACTGGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggca < 2:251604‑M1/143‑56 (MQ=255) gAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACTAC‑‑‑‑GCAAGAATATGCA‑AGTATCGTCTTCTTTGAAGTTGCGGAAGGTCACGCCGGTACCTCGACTGTGGcgt > 2:382187/1‑141 (MQ=255) gAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaacgcaactggggcat > 2:38816‑M1/1‑87 (MQ=255) cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcccgccggtaactccgctgtggcatttaccatcc > 2:114059‑M1/1‑78 (MQ=255) agCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGAAGACGGCCTGCATctccttcttctttttttaagatgcggaagatcacgccggtaactccactgtgatatctatcatccgtg > 1:55926‑M1/1‑75 (MQ=255) ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGAAGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagataacgccggtaactccgccggggcatttgacaagcgtgat > 2:276937‑M1/1‑73 (MQ=255) cccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct < 2:132372‑M1/143‑79 (MQ=255) ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 2:410931‑M1/143‑84 (MQ=255) gAAGACATCGAAGCATCGGCACGTTGCTTTGAAGACGACGACGGCCCGC‑‑ATT‑‑‑TCCTTCTTCTTCTGTGAAGCTGCGGAAGATCACGCCGGTAACACCACTGGGGCATTTGGGATCCGCGATGGTCGGCTGTGTAGTCGgagtg > 2:178003/1‑143 (MQ=255) aaGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaact > 2:332837‑M1/1‑41 (MQ=255) gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATA‑TAACT‑CTACCTGGT‑GGTGCATAT‑‑GGTTGTTGGCACCCCAAACCCCACTGTGGCATTTACCATACGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc > 2:525096/1‑143 (MQ=255) cATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcc > 2:211242‑M1/1‑38 (MQ=255) gTTTCTTTGAAGACGACGACGGCCTGCATcgccttcttcttcttagaagaagcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcg > 2:184655‑M1/1‑29 (MQ=255) ttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtc < 2:525933‑M1/143‑117 (MQ=255) cttgAAGACGACGACGGCCTGCATctccctcttctgctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgt < 2:482952‑M1/142‑120 (MQ=255) ttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgttagcgtgaactgcccgctttccgtctgta > 2:288509‑M1/1‑23 (MQ=255) tGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgacctgcccgcgtttcgtctgtat > 2:236662‑M1/1‑22 (MQ=255) gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtg > 1:312423‑M1/1‑12 (MQ=255) | ATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAT > NC_000913/4001513‑4001774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |