| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,375,828 | IS186 (+) +4 bp | coding (132‑135/963 nt) | menC ← | O‑succinylbenzoyl‑CoA synthase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2375828 = | 0 (0.000) | 20 (0.720) | 18/276 | 0.6 | 100% | coding (135/963 nt) | menC | O‑succinylbenzoyl‑CoA synthase |
| ? | NC_000913 | = 2515617 | NA (NA) | noncoding (1345/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 2375831 | 0 (0.000) | 27 (0.970) | 21/276 | 0.3 | 100% | coding (132/963 nt) | menC | O‑succinylbenzoyl‑CoA synthase |
| ? | NC_000913 | 2514273 = | NA (NA) | noncoding (1/1345 nt) | IS186 | repeat region | |||||
CTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGA > NC_000913/2375686‑2375968 | gcagcttacagggggccattcgtgggacagtatcccgaacagtctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggag > 2:329113‑M1/143‑143 (MQ=255) tGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGgaga < 2:399561/143‑1 (MQ=255) aaTGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtc < 2:287111‑M1/143‑3 (MQ=255) aggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgagccgtcgcattcttcagatggttcaacccttaggttagcgcttatgggaGGTCtccccg < 2:519630‑M1/10‑2 (MQ=255) ggccattcgtgggacagtagccctgacagcctacagaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCAcc > 1:486502‑M1/130‑143 (MQ=255) attcgttgtacattatccttgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttacgttagagcttatgggaGATCTCCCCCCACCCTTc > 1:75247‑M1/126‑143 (MQ=255) ttcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATATCCCCCCACCCTTcg < 1:392657‑M1/19‑1 (MQ=255) cGCCAAAGGCCACGGCAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCTAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaa < 1:50331‑M1/143‑16 (MQ=255) tccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACg < 1:157054‑M1/33‑1 (MQ=255) tccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCCCTCGCCTTCACg < 2:8874‑M1/33‑1 (MQ=255) cctgacagcctacaacacgcgattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCACCGCTCCGCGCTCGCCTTCACGCa > 2:461368‑M1/109‑143 (MQ=255) cctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttcagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACgcc < 1:369634‑M1/35‑2 (MQ=255) ctgagggcctacagaacgcaatggaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAg > 2:385874‑M1/108‑143 (MQ=255) tCTGCGTTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacg < 1:310091‑M1/143‑37 (MQ=255) cagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCaa > 1:324030‑M1/104‑143 (MQ=255) cctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACa < 1:282480‑M1/43‑1 (MQ=255) ggTAGCTCGCAATCGCCTGCCAGCCAGTTATTTAACCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGATTCCTGACTGAAGCCCGGCAGTGGAGGGATCtccaataagcgctaactaaagcgtagtggtacgacgcccga > 2:322556‑M1/1‑102 (MQ=255) tctcaatCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCGTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgat < 1:321311‑M1/140‑48 (MQ=255) gcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGt < 1:152099‑M1/53‑1 (MQ=255) gCAAGCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgattt < 2:223708‑M1/143‑50 (MQ=255) gccgcCGGCCAGCCAGTTCTCCACCCAGGCAAGCAGCACGCTTTGCGCGTCTTCCCAGGTGTCCTGACCGCAGCCCGGCAGTGGGGAGGTCtcccatatgcgctaacttaagggttgtggtattacgcctgatatgatttaac < 1:6955‑M1/141‑53 (MQ=255) ctgcctgcCAGTTCTTTACCCATGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGCCTGAAGCCCTGCAGTGTGGAGTTCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgcc < 2:437761‑M1/143‑58 (MQ=255) agaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGtt > 1:526949‑M1/83‑143 (MQ=255) gcccgccgGTTATTTGCCTGGGCTAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgcaaacttaagggttgtggtattacgcctgatatgatttaacgtgccga < 2:380131‑M1/143‑60 (MQ=255) gccagccaGTTATTTACCCAGGCAAGCAGCACACTTGGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccga < 2:477199‑M1/143‑60 (MQ=255) aacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGtttt > 1:282217‑M1/81‑143 (MQ=255) ccagTTATTTACCCAGGCAAGCAGCACATTTTGCGCTTCTTCCCAGGTTTCCTGATTTAAGCCCGGCAGTTGGGAGTTCtcccataaccgctaacttaagggttgttgtattacgcctgatatgatttaacgtgccgatgaat < 1:77337‑M1/143‑65 (MQ=255) ttACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctca < 1:285769‑M1/143‑73 (MQ=255) tgccccgggCAAGCAGCCCACTCTGCGCCGCTTCCCAGGTCTCCTGCCTGAAGCCCGGCAGTGGGGAGATCccccataagcgctatcgtaacggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctca < 1:90760‑M1/140‑73 (MQ=255) cgacgcaccgaggcgtcgcattcttcagattgttcaacccttaagttagcgcttacgctaGATCTCCCCCTACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGaa > 1:482504‑M1/61‑143 (MQ=255) aaGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCCGCAGTGTTGTCGACgcccataggcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactgg < 1:239564‑M1/143‑83 (MQ=255) agcagcACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccagaagcgctaacttgagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggt < 2:454832‑M1/143‑84 (MQ=255) gaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCCTCCCGCACGCACACATACAACCCGTCGCGGGACTTGATCCGCCTGTCGCGCAGCAccgcccgcg < 2:453614‑M1/92‑4 (MQ=255) acgccttgcgccTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaa < 2:390713‑M1/138‑90 (MQ=255) acTGTGCTCCTCTTCCCAGGTTTCCTGACTGAACCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgagttaacgtgccgatgaattactctcacgataactggtcagcaatt < 2:412434‑M1/143‑92 (MQ=255) tGCGCCTCTTCCCCGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctatcttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctgg < 2:219556‑M1/143‑96 (MQ=255) tGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctgg < 1:298182‑M1/143‑96 (MQ=255) gcgcCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGAGGGGAGATCtcccataagcgctaacttaagggatgtggtattccgcctgatatgatttaacgtgccgatgaattactcacacgataacgagtcagccattctcgc > 2:149519‑M1/1‑47 (MQ=255) gcgcCTCTGCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggc < 1:483993‑M1/143‑97 (MQ=255) cattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTCACCGCCTGTCGCGCAGAACCACCcccgcgtgcaggg < 1:463858‑M1/101‑7 (MQ=255) cattcttcagatggtccaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATgg > 1:8725‑M1/43‑143 (MQ=255) tCCCAGGTTTCCGGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattg < 1:269989‑M1/143‑105 (MQ=255) tCCGGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccg < 2:289503‑M1/143‑114 (MQ=255) cttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGATTTTAACCGCCTGTCGCGCAGAACCACACACGCGGGCATGGGGATCTGCAAGCGGTATACCt < 1:263616‑M1/122‑1 (MQ=255) aaGCCCGGCAGTGGGGAGATCccccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgg < 1:75876‑M1/143‑123 (MQ=255) aaGACCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgg < 2:276785‑M1/143‑123 (MQ=255) cAGTGGGGAGATGtcccataagcgctaacttaagggtggtggcattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcg < 1:416197‑M1/143‑131 (MQ=255) gggAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaaggactggagacataggcacg > 1:459972‑M1/1‑8 (MQ=255) ggaGAGCGCACCCCACGCTTCGCGCTCGCCTTCACGCAGGCAAACAGACAGCCCGTCGCGGGTTTTTACCCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGTTACGCATTACgg > 1:347669‑M1/4‑143 (MQ=255) caGATCTCCCCCCCCCCGCCGCTCGCGCCTTCACGCAGCCAAACACGCGGCCCGTCGCGGGTTTTTAACCGCCCGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGa > 2:220377‑M1/3‑143 (MQ=255) | CTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGA > NC_000913/2375686‑2375968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |