Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 153,986 IS5 (–) +4 bp coding (1438‑1441/2598 nt) htrE ← putative outer membrane usher protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 153986 =0 (0.000)52 (1.810) 34/284 0.0 100% coding (1441/2598 nt) htrE putative outer membrane usher protein
?NC_000913 = 275149 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 1539890 (0.000)22 (0.760) 19/284 0.5 100% coding (1438/2598 nt) htrE putative outer membrane usher protein
?NC_000913 273955 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

GAAAGATAAAATGAACCGTAATCTTTTTTCTCAAATTTCAACGGTTGGTTAATACTGACCGTAACCTGATTTTTCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAACACGATAACTTTGCCCCTGGTATGTTTTATCATCCGG  >  NC_000913/153847‑154127
                                                                                                                                              |                                                                                                                                          
gAAAGATAAAAGGAAGCGTAATCTCGTTTCTCAAATTTCAACGGTTGGTTAATACTGACCGTAACCTGAGTTTTCATGCGGGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTag                                                                                                                                            <  2:515017/143‑1 (MQ=255)
aaaatgtctttgctggtcggagggcgcttacgcctgaattcactgtcggcgaagctaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTag                                                                                                                                            >  2:122144‑M1/140‑143 (MQ=255)
aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTag                                                                                                                                            >  1:470680‑M1/140‑143 (MQ=255)
aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTag                                                                                                                                            <  2:318042‑M1/4‑1 (MQ=255)
 aaacctcttttcctgtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTaga                                                                                                                                           >  1:155338‑M1/139‑143 (MQ=255)
  aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTcgag                                                                                                                                          >  2:90730‑M1/138‑143 (MQ=255)
    tctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaacactgttctatggctcctgatgacaaacatgatctcatatcagggcattattcgcaccttccTTAAAGtt                                                                                                                                        <  2:497612‑M1/8‑1 (MQ=255)
                 ctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactaatgatgaacactgttctatggctccagatgacaaacatgatatcatatgagggacttgttcgcaacttacTTAGAGTTCGTGAATCATTaa                                                                                                                           <  2:47798‑M1/21‑1 (MQ=255)
                  tgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctgcagatgctcaacctgatcccataacagggacctgttcgcaccgtccTTAGAGCTGGCGCAGCATTAAg                                                                                                                          <  2:499257‑M1/22‑1 (MQ=255)
                  tgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAg                                                                                                                          >  1:147148‑M1/122‑143 (MQ=255)
                  tgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatgcctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCCTCATTAAg                                                                                                                          <  2:222477‑M1/22‑1 (MQ=255)
                     tCTGTTTTCTCAAAGTGCAACGGTTGGTTAATACTGACCGTAACCTGATTTTTCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcgggg                                                                                                                       <  1:521044‑M1/143‑22 (MQ=255)
                        cgcttactggtgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAg                                                                                                                    >  2:37317‑M1/116‑143 (MQ=255)
                           ttCTCAAATTTCAACGGTTGGTTAATACTGACCGTAACCTGATTTTTCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCCATTAGggaaggtgcgaataagcggggaaattc                                                                                                                 >  1:104527‑M1/1‑116 (MQ=255)
                               tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatctcaggcacttgttcgaaccttccTTAGAGTTAGTGCATCATTCAGACgaaggtgcttc                                                                                                             <  2:320566‑M1/35‑6 (MQ=255)
                               tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCACGCTTAAGACCAAGGCAATTc                                                                                                             <  2:220423‑M1/35‑1 (MQ=255)
                               tgctgaattcactgtcggcgaaggtaagttgatgacccatgatcaaccctgtcctatggctccagctgacaaacatgatctcatatcagggacttgctcgcaccttccTCAGAGTTAGTGCATCAGTAAGACCAAGGTAATTc                                                                                                             <  2:286187‑M1/35‑1 (MQ=255)
                                aaaTTTCAACGGTTGGTTAATACTGACCGTAACCTGATTTTGCATGCGTGAGTAATTACGCATGGATTTCGGTTGACGCTCTTGTTCGGGATGTCTCACTTCATCACTGCGggaaggtgcaaagaagcggtgaactgcttcta                                                                                                            >  2:335545‑M1/1‑111 (MQ=255)
                                 ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCtg                                                                                                           <  2:330476‑M1/37‑1 (MQ=255)
                                 ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATCCtg                                                                                                           <  1:427619‑M1/37‑1 (MQ=255)
                                 aaTTTCAACGGTTGGTTAATACTGACCGTAACCTGATTTTTCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcg                                                                                                           >  1:247910‑M1/1‑110 (MQ=255)
                                  tgaaggcactgtcggcggaggtgagttgatgactcatgaggaaccctgttctatggctccagatgacaaacatgatcgcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCtgt                                                                                                          >  2:129454‑M1/106‑143 (MQ=255)
                                     gctacggTTTGTTAATATTGACCGTAACCTGATTTTTCATGCGTGAGTAATTACGCATGCATTTCGGTTCAAGATCTTGTTCGGGATTTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                       <  1:105691‑M1/140‑38 (MQ=255)
                                           tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGCATAg                                                                                                 <  2:409583‑M1/47‑1 (MQ=255)
                                           tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAg                                                                                                 >  2:148153‑M1/97‑143 (MQ=255)
                                             tggttAATACTGACCGTAACCTGATTTTTCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggccgactcagtc                                                                                               >  2:99339‑M1/1‑98 (MQ=255)
                                              cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGa                                                                                              >  1:246378‑M1/94‑143 (MQ=255)
                                               gttAATACTGACCGTAACCTGATTTTTCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATGAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                                                                             >  1:439494‑M1/1‑96 (MQ=255)
                                                gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCCAGGTATTTCTGTGTCGAATAGCGatg                                                                                            <  1:26197‑M1/52‑2 (MQ=255)
                                                  gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggaattgttagcaccttccTTAGAGATAGTGCATAATTAAGAACAAGGTAGTTATGTGtcgaatagggaaaag                                                                                          <  2:197059‑M1/54‑8 (MQ=255)
                                                       taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCCAGGTAACTCTGTGTCGAATAGCGAGAGGCcgcg                                                                                     <  2:267614‑M1/59‑1 (MQ=255)
                                                       tGACCGTAACCTGATTTTTCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc                                                                                     <  1:205178‑M1/143‑56 (MQ=255)
                                                            ggaggactcgggatgaccccggttcgatggttcccggtggcaagcatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGAGCACGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATAtt                                                                                >  2:224658‑M1/80‑143 (MQ=255)
                                                                 cTGATTTTTCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaagttcttctcggctggctcagtcatttcatttcttgatggttg                                                                           >  1:44501‑M1/1‑78 (MQ=255)
                                                                 cTGATTTTTCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg                                                                           >  1:441111‑M1/1‑78 (MQ=255)
                                                                    catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCcgtgcag                                                                        <  1:463452‑M1/72‑4 (MQ=255)
                                                                     tttttCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtgatttcgttgtttcatgtagagctg                                                                       >  1:378816‑M1/1‑74 (MQ=255)
                                                                      ttttCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctgggatgactcagtaatttaatttgttcatgtgtgagcgg                                                                      >  1:128019‑M1/1‑73 (MQ=255)
                                                                          gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGGTAGGGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGGTGGTCAGTGAAGTGCTTg                                                                  <  1:43940‑M1/78‑1 (MQ=255)
                                                                          cATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaactcttctcggctgactcagtcatttcatttcttcatgtcggagcccatct                                                                  >  2:215489‑M1/1‑69 (MQ=255)
                                                                           aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGt                                                                 <  1:33267‑M1/79‑1 (MQ=255)
                                                                           aTGCGTAAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTTACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                 <  1:426807‑M1/143‑76 (MQ=255)
                                                                            tgcgtgcgTAATTACGCATGCATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaacgtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt                                                                <  1:260331‑M1/143‑77 (MQ=255)
                                                                             gCGTGAGTAGTTTTGCATGGATTTCGGTGCGAGTTCTTGTTGGGGAGTTTCCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctgtctcagtcatttcatttcttcatgtttgagccgatttttt                                                               <  2:227370‑M1/143‑78 (MQ=255)
                                                                              cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaacttccTTAGAGTTAGTGCATCATTAAGACCAAGGTCATTCTGTGTCGAATAGCGATAGGCCGCGATATTCACGGAAGTACttgtgtc                                                              <  1:169192‑M1/82‑4 (MQ=255)
                                                                                 gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAATACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTttcttc                                                           >  2:72785‑M1/59‑143 (MQ=255)
                                                                                  aGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc                                                          <  2:419392‑M1/143‑83 (MQ=255)
                                                                                       tggctccagatgacaaacatgatctcatatcagtcacttgttctcaccttccTTAGAGTTAGTGCATCATTAATACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATaa                                                     >  1:85429‑M1/53‑143 (MQ=255)
                                                                                           tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCCAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTg                                                 <  2:43900‑M1/95‑1 (MQ=255)
                                                                                                atgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCa                                            >  1:506599‑M1/44‑143 (MQ=255)
                                                                                                 aTTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat                                           >  1:295898‑M1/1‑46 (MQ=255)
                                                                                                   agaaacatggtgtcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGa                                         >  2:138159‑M1/41‑143 (MQ=255)
                                                                                                     aaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGaaa                                       <  1:28906‑M1/105‑1 (MQ=255)
                                                                                                     aaacatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGAATCATTAAGACCACGGTAATTCTGTGCCGAATCGCGATAGACCGCGATCTTCAGTGAAGTACTTGTTTCTTCGAATAACTAGCTCCAGGaaa                                       <  2:184108‑M1/105‑1 (MQ=255)
                                                                                                       acatgatctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAaca                                     >  1:47798‑M1/37‑143 (MQ=255)
                                                                                                          cAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttgctcccgtaaatgccttgaatcagcctatt                                  <  1:223036‑M1/143‑107 (MQ=255)
                                                                                                          cAAGATCTTGGTCTGCATGTGTCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt                                  <  2:277931‑M1/143‑107 (MQ=255)
                                                                                                             tctcatatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAACACGATaa                               >  2:185785‑M1/31‑143 (MQ=255)
                                                                                                                  tatcagggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGAAAACACGATAAATTTg                          <  2:492932‑M1/118‑1 (MQ=255)
                                                                                                                      agggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATCACTTGTTCCAGGAAACACGATAACTTTGcccc                      <  1:209252‑M1/122‑1 (MQ=255)
                                                                                                                        ggacttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGCCCGAGACCGTCGGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAACACGATAACTTTGCCCCTg                    <  1:383041‑M1/124‑1 (MQ=255)
                                                                                                                            ttgttcgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAACACGATAACTTTGCCCCTGGTAt                <  1:8609‑M1/128‑1 (MQ=255)
                                                                                                                               tCACTTCATCAATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt             >  1:211357‑M1/1‑16 (MQ=255)
                                                                                                                                 cgcaccttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTTGAATAGCTATAGTCTGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAACACGATAACTTTGCCCCTGGTATGtttt           >  1:343647‑M1/11‑143 (MQ=255)
                                                                                                                                 cgcaccttccTTAAAGTTAGGGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAACACGATAACTTTGCCCCTGGTATGtttt           >  1:489376‑M1/11‑143 (MQ=255)
                                                                                                                                      cttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAACACGATAACTTTGCCCCTGGTATGTTTTatcat      <  1:446034‑M1/138‑1 (MQ=255)
                                                                                                                                      cttccTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAACACGAGAACTTTGCCCCTGGTATGTTttatcgt      <  2:327620‑M1/138‑3 (MQ=255)
                                                                                                                                      atcaATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtgtcttcgccatttgaggcgt      >  2:69067‑M1/1‑9 (MQ=255)
                                                                                                                                          cTTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAACACGATAACTTTGCCCCTGGTATGCTTTCTCatcccg  <  2:17980‑M1/142‑3 (MQ=255)
                                                                                                                                              |                                                                                                                                          
GAAAGATAAAATGAACCGTAATCTTTTTTCTCAAATTTCAACGGTTGGTTAATACTGACCGTAACCTGATTTTTCATGCGTGAGTAATTACGCATGGATTTCGGTTCAAGATCTTGTTCGGGATGTTTCACTTCATCAATTAGAGTTAGTGCATCATTAAGACCAAGGTAATTCTGTGTCGAATAGCGATAGGCCGCGATATTCAGTGAAGTACTTGTTTCTTCGAATAACTTGTTCCAGGAAACACGATAACTTTGCCCCTGGTATGTTTTATCATCCGG  >  NC_000913/153847‑154127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.