| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009273 | 4,145,501 | Δ320 bp | coding (573‑892/1005 nt) | argC → | N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009273 | 4145501 | 4145820 | 320 | 61 [0] | [0] 61 | argC | N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4145500 | 0 (0.000) | 57 (1.090) | 45/278 | 0.2 | 100% | coding (572/1005 nt) | argC | N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding |
| ? | CP009273 | 4145821 = | 0 (0.000) | coding (893/1005 nt) | argC | N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding | |||||
TCGGGTGTGACCCAGGCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTATCAAACTG > CP009273/4145673‑4145967 | aattaaaagaagcgaatttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcga < 1:870824‑M2/1‑1 (MQ=255) ttaaaagaagcgaatttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccgggtgtctacgccaccagcggcgtgagcggtgcagggcgAGc > 1:630208‑M2/147‑149 (MQ=255) taaaagaagcgaatttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCa > 1:129003‑M2/146‑149 (MQ=255) agaagcggattggagggcggggccggggtggtatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaagcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGc < 2:797298‑M2/3‑1 (MQ=255) cgaatttgattgcggtgccgggctgttaccagacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGattat < 1:863528‑M2/13‑1 (MQ=255) tttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATtgtg < 1:539012‑M2/17‑1 (MQ=255) tttgattccggtgccgggctgttatccgacggtggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATtgtg < 1:474031‑M2/17‑1 (MQ=255) gattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGCTTATtg < 2:542065‑M2/15‑1 (MQ=255) ttgcggtgccaggctgtaaaccgaaagcggaacagctggagctaaaaccattgattgatgccgatcttcttgacctcactcagtggccggtgatcaacgccaccagcggcgtgagctgtgcagggcgAGCATCTGATTATTGTGGCGAc < 1:886973‑M2/22‑1 (MQ=255) gccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCg < 2:314064‑M2/24‑1 (MQ=255) tcgggctgttatcggacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACa < 1:53500‑M2/30‑1 (MQ=255) ggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGa < 2:315023‑M2/28‑1 (MQ=255) ggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACt < 1:128456‑M2/33‑1 (MQ=255) gctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGAc < 2:263625‑M2/29‑1 (MQ=255) ctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgccctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAAATTa > 1:243885‑M2/115‑149 (MQ=255) tgttatccgacggcggcacagctggcgcggaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatccacgcaacgagcggcatgcatgatccagggcgAGCATCTGATTATTGTGTCGACCGAAGACAACTTAc < 1:681010‑M2/36‑1 (MQ=255) tccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCGTCTGAGTATTGTGGCGACCGAAGGCAACTTAc > 2:403826‑M2/109‑144 (MQ=255) cgggcccgcgggcgctgaaaccgttgattgatgccgatctccttgacctcaatcagtggccggtgatcaacgccaccaccggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCgcggc < 1:67874‑M2/49‑1 (MQ=255) gcacagctggcgctgaaaccgttgaatgataccgatcttcttgacctcaatcagtggccggtgatccacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGcggcgg > 1:481619‑M2/99‑149 (MQ=255) cacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCggcggc > 1:927018‑M2/98‑149 (MQ=255) cagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatccgtggccggtgatcaacgctaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCgcggc > 2:820076‑M2/96‑144 (MQ=255) agctggcgctgaaaccgtggattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCgcggcg < 2:793425‑M2/50‑1 (MQ=255) ctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCggcggc > 2:212597‑M2/93‑144 (MQ=255) tggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGc > 1:232664‑M2/92‑149 (MQ=255) ctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGCAAGGGGCGGCGGCCCAAGc > 2:207386‑M2/87‑144 (MQ=255) tgaaaccgttgattgatgccgatcttcttgacctcaatccgtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCg < 2:840553‑M2/59‑1 (MQ=255) tgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGAAAGTTTTTTTGTTGGCGCGGCGGCACAAGCGGTACa < 1:225307‑M2/64‑1 (MQ=255) tgaaaccgttgatcgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACa < 1:268003‑M2/64‑1 (MQ=255) cgaaaccgctgattgatgcctatcttctcgccctcaatcagtggccggtgaccaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGCACGGTCTCAACCGACTGAAAGGCGCGGCGGCACAAGCGGTACa < 1:224156‑M2/64‑1 (MQ=255) accgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTgc > 1:462053‑M2/82‑149 (MQ=255) tgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATAtt > 1:925896‑M2/73‑149 (MQ=255) tgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATAtt > 1:608869‑M2/73‑149 (MQ=255) tcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCg < 2:418872‑M2/84‑1 (MQ=255) tgactcctatcagtggccggtgatcaaccccaccacgggcgtgggcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCt < 2:124483‑M2/87‑1 (MQ=255) cctccatcaggggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATCATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATg < 2:113610‑M2/90‑1 (MQ=255) ctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGAACGAAGACAACTTACTGAAAGGCGCGGCGGCACCAGCGGTGCAGTGCGCCAATATGGCTTGCGGCTAtgg > 2:32895‑M2/54‑143 (MQ=255) tcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAAc > 1:603677‑M2/53‑149 (MQ=255) tcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGAGCGGCGGCACAACCGGTACAGCCGGCCAGTCCCCGTGTCGGCTatgcggggag > 1:398019‑M2/53‑145 (MQ=255) ccagtcggggtccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACCGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCg < 2:537209‑M2/92‑1 (MQ=255) caatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCgg < 2:472433‑M2/93‑1 (MQ=255) tggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACGTAGTGAAGGGCAGGACGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCCGtctc > 1:445666‑M2/45‑149 (MQ=255) ccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTa > 1:537443‑M2/42‑149 (MQ=255) cggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAACATGCGGTTCGGCTATGCGGAAACTCAgtcg > 2:472095‑M2/41‑143 (MQ=255) gatcaaggcgaccagcggggtgagcggtgcggggcgAGCGTCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTa < 2:56506‑M2/108‑1 (MQ=255) atcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGcggaaacgcaccactccgc < 2:46886‑M2/109‑10 (MQ=255) tcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAgg > 1:855183‑M2/35‑149 (MQ=255) tcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGAGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAgg > 1:663489‑M2/35‑149 (MQ=255) aacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGACAATACTCGGTTCGGCTATGCGGAAACGCAGCCtcctactga > 2:506430‑M2/33‑140 (MQ=255) aacgccaccagcggcgtgagcggtgaagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTGCGGCTCTGCGGAACCGCAGCCCCTTCTTTAAGGGt > 1:554164‑M2/33‑149 (MQ=255) gccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACACGCGGTGCAGTGCGCCAATATTCGTTTCGGCTATGAGGAAAAGCAGTCTCTTATTTAAGGGGGCa > 1:13679‑M2/30‑149 (MQ=255) gccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGgtgga > 1:273686‑M2/30‑147 (MQ=255) ccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCaa > 1:802408‑M2/29‑149 (MQ=255) tgagcggttcagggcgAGGATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCat < 1:59077‑M2/133‑1 (MQ=255) gcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATCTTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCattaa < 1:872792‑M2/136‑1 (MQ=255) cggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATgaatacc > 2:368220‑M2/13‑141 (MQ=255) ggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCat < 2:521307‑M2/133‑1 (MQ=255) tgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGCAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAAGTAt > 1:767613‑M2/10‑149 (MQ=255) cagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTATCa > 1:529659‑M2/8‑149 (MQ=255) ggcgGGCATCTGATTATTGTGGCGACCGAAGACAATTTACAGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTAt < 2:88714‑M2/140‑1 (MQ=255) cgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGTCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCCTTAATTATCAAACTg > 1:627512‑M2/3‑149 (MQ=255) aGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTCTCcaa < 2:784714/144‑1 (MQ=255) | TCGGGTGTGACCCAGGCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTATCAAACTG > CP009273/4145673‑4145967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |