| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 313710 = | 2 (0.030) | 54 (0.920) | 43/296 | 0.3 | 96.4% | coding (321/594 nt) | rclC | reactive chlorine species (RCS) stress resistance inner membrane protein |
| ? | CP009273 | 1462167 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
Only 100 of 104 total aligned reads displayed.
CAGCACCGGATAAATAAGGGAAACCATGATGAGCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGTTTATAGTCTTCCGG > CP009273/313562‑313853 | caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa > 2:82704‑M1/149‑149 (MQ=255)caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa < 1:147817‑M1/1‑1 (MQ=255)caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa > 2:826670‑M1/149‑149 (MQ=255) aaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAt < 2:890454‑M1/2‑1 (MQ=255) aaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAt < 2:805380‑M1/2‑1 (MQ=255) aaagaaccttgcagaggcgttcgagcattataaagaatggcatccgcatagtgcgctgggttatcgcttgccacgggaatatctgcggcagcgggcttgtaatgggttcagtgataacagatgtcgggcaatataggggccaatccaat < 2:567779‑M1/2‑1 (MQ=255) aGCACCGGATAAATAAGGGAAACCATGATGAGCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGAt < 2:282068/149‑1 (MQ=255) cACCGGATAAATAAGGGAAACCATGATGAGCGTCACCCAATGCGGGTACCCATGCCTCGGGGGAGGTGGGTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCAATCAGTCCTCCAAAGAAACCTAACCAGCGATTGACAGGAGTa > 2:821035/1‑149 (MQ=255) gaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAg > 1:871410‑M1/145‑149 (MQ=255) ccGGATAAATAAGGGAAACCATGATGAGCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGt > 2:57867‑M1/1‑148 (MQ=255) ggATACATAAGGGAAACCATGATGAGCCTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtag < 2:813762‑M1/149‑4 (MQ=255) ggATAAATAAGGGAAACCATGATGAGCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAGTGAGAGTGTTACCAGCGTCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtag < 2:706914‑M1/149‑4 (MQ=255) ttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCaaa < 1:468555‑M1/10‑1 (MQ=255) tgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCaaaa < 1:792884‑M1/11‑1 (MQ=255) tgcagaggcgttcgagcattataacgaagggcagccgcatagtgcgctgggttatcgctcgccacgggaatatcggcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCaaaa > 1:890339‑M1/139‑149 (MQ=255) cagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAAcc > 2:832969‑M1/137‑149 (MQ=255) agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatatcggggcaaatctgATTAGCCAAAACca < 1:736210‑M1/14‑1 (MQ=255) taaGGGAAACCATGATGAGCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggcc > 1:660917‑M1/1‑139 (MQ=255) gaggggtgcgagcattaggacgaatggcatccgcagagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataccagatgtctggaaatataggggcaaatccaATTAGCCAAAACcag > 2:896898‑M1/135‑149 (MQ=255) aggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccaATTAGCCAAAACcagc < 2:640820‑M1/16‑1 (MQ=255) gggAAACCATGATGAGCGTCCCCCAATGCGGGTACCCATGCCTCCGGGGCGGTCATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCAAACCAGCGATTGACAGGATTAGtagactggccccc > 2:510723‑M1/1‑136 (MQ=255) ggAAACCATGATGAGCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAACCCTAACCAGCGATTGACAGGATTAGtagactggccccct > 1:296307‑M1/1‑135 (MQ=255) ggAAACCATGATGAGCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccct < 2:127654‑M1/149‑15 (MQ=255) gtcggacattataacgaatggcatccgcatagggcgctgggttatcgcccgacacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGc > 2:261260‑M1/129‑149 (MQ=255) agcattataacgaatggcatccgaatagtgcgctgggtgatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggataagtgagaacagatgtctggaaatatcggggcaaatccaATTAGCCAAAACCAGCCGAGCaata < 2:715268‑M1/25‑1 (MQ=255) cattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCCAAACCAGCCGAGCaataat < 2:74720‑M1/27‑1 (MQ=255) cattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaacataggggcaaatccaATTAGCCAAAACCAGCAGAGCaataat > 1:819382‑M1/123‑149 (MQ=255) gCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaa < 2:931209‑M1/149‑29 (MQ=255) gCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaa > 1:25357‑M1/1‑121 (MQ=255) gCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGAGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGAATAGtagactggccccctgaatctccagacaa > 1:395499‑M1/1‑121 (MQ=255) cGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACCGGATTAGtagactggccccctgaatctccagaacac > 1:69144‑M1/1‑120 (MQ=255) gTCACCCGACGCGGGCACCAATGCCTTCGGGGTGGTGATTAAAAATGACAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCACCGATTGACAGGATTAGtagactggccccctgaatctccagacaacc < 2:239266‑M1/149‑31 (MQ=255) atgggatccgcatagtgcgctgggttatcggtcgccagcggaatagctgcggcagtgggtctgtaatgggttaagtgatcacagttttctgtagatatatgggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCacga > 2:902889‑M1/112‑149 (MQ=255) ccAATGCGGGTACCCATGCCTCCGGGGGGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccccgaatctccagacacccaatat > 2:366592‑M1/1‑114 (MQ=255) gcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttcagtgataacagatgtctgggaatataggggcgaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGc < 2:188496‑M1/41‑1 (MQ=255) cGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGACAACCAGGTTTAGtagactggccccctgaatctccagacaaccaatatcactta > 1:218522‑M1/1‑108 (MQ=255) gggTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGCTTAGtagactggccccctgaatctccagacaaccaatctgccttaa > 2:694239‑M1/1‑107 (MQ=255) tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagagctaccagatgtacggaaatataggggcaaatccaATTTACCGAAACCAGCAGAGCAACAATCCCCTCCACGCCACCAAGACCGt < 2:819213‑M1/50‑1 (MQ=255) ccATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccccgaatctccagacaaccaatatcacttaaataagt > 2:150836‑M1/1‑101 (MQ=255) aTGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCACCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtga > 1:510934‑M1/1‑99 (MQ=255) tGCATCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCACATAAAACTAACCAGCGATTGACAGGATTAGtagactcgacccctgactctccagacaacacatatcactgaaatgagtgat > 2:787055‑M1/1‑98 (MQ=255) tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAgg < 1:234205‑M1/65‑1 (MQ=255) cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGt < 1:170603‑M1/66‑1 (MQ=255) cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtcgggaaatataggggcaaatccaATTAGCCACAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGt < 2:847991‑M1/66‑1 (MQ=255) tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGGGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATaggtctc < 2:626273‑M1/69‑4 (MQ=255) tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGtatt > 2:2845‑M1/81‑149 (MQ=255) cgccacgggaatatctgcggcagctgtcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATACGtatta > 2:703335‑M1/80‑149 (MQ=255) ttAAAAATGAGAGTGTTACCAGCGGAGCGGAGCGTTCCGACAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGGTTAGtaggctggccccctcaagctccagacaaccaatatcacgtaaataagtgatagtcttaatactagttt > 1:466020‑M1/1‑81 (MQ=255) acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTgg > 1:84284‑M1/76‑149 (MQ=255) atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctgtaaatattggggcaaatctaATTTGCCAAAACCAGCAGAGCAGTAATCTCCTCCACTACGCCAAGACCGTTCGAAAAA‑CCATAGGTATTATTGGCCGttt > 1:715268‑M1/70‑149 (MQ=255) atatctgcggcagcgggcttgtaacgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAACCCCCTCCACGACGCCAAAAACGATAAAAAAA‑CCATAGGTATTATTGGCCGttt > 2:511579‑M1/70‑149 (MQ=255) atatctgcggcagcgggcttgcaatgggttaagtgataacagatgtctggaaatatagtggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCCCCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGttt > 2:371139‑M1/70‑149 (MQ=255) gagaGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatccccagacaaccaatatcacgtaaataagtgatcgtcttaatactcgttcttagctca > 2:849579‑M1/1‑73 (MQ=255) atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGc > 2:687673‑M1/68‑149 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCa > 1:291971‑M1/66‑149 (MQ=255) agTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactggtttttcgactagtc > 1:32306‑M1/1‑70 (MQ=255) tgtTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat > 2:107359‑M1/1‑68 (MQ=255) gtTACCAGCGGCGTGGTAAATGCCATCAGTCCCCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt < 1:791638‑M1/149‑83 (MQ=255) tgaccAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg < 1:287928‑M1/147‑84 (MQ=255) ccAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggag > 1:416640‑M1/1‑63 (MQ=255) cAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga > 1:215315‑M1/1‑62 (MQ=255) ctgcatgccacatgccatcagtcCTCCCACTACACCTAACCAGCGATTGACAGGAATAGcagactggtcctctgaatcttcagacaacctatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca < 2:819629‑M1/138‑91 (MQ=255) cggcgTGGTAAATGCCATCAGTCCTCCCAATAACCCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccgatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca < 1:633304‑M1/149‑91 (MQ=255) gggttgtaaatGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacaga < 2:472916‑M1/144‑93 (MQ=255) cttggaatgggttaagggataacagatggctggaaatataggggcaaatccaACTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCt > 2:408003‑M1/53‑149 (MQ=255) tGGTAAATGCCATCAGTCCTCCCAATAAACCTACCCAGCGATGTACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatga < 1:256374‑M1/149‑96 (MQ=255) gaatgggtgaagtcataacagatgtctggaaacataggggcaactcccAGTAGCCAAAACCAGAAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGtt > 2:191764‑M1/49‑149 (MQ=255) aatgggttaagtgataacagatgttgggaaatatgggggcactgtcaAATAGCCAAACCCAGCAGCGCAATAATCACCTCCACGACGCCCAGACCCTGGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCGTGCCCTTGCTTCTGGttt > 2:817255‑M1/48‑149 (MQ=255) aaaTGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcccttaaataagtgatagtcttaatactagtttttaaactagtcattgaagcagacatgattga > 2:782009‑M1/1‑50 (MQ=255) tGCCATCAGGCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagttttaatactagtttttagactagtcattggagaacagatgattgatgt < 2:107279‑M1/149‑103 (MQ=255) ttaagtgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTc < 1:121381‑M1/108‑1 (MQ=255) gCCATCGGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtc > 2:904500‑M1/1‑46 (MQ=255) gCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtc > 1:487397‑M1/1‑46 (MQ=255) aTCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta < 1:8192‑M1/149‑107 (MQ=255) tgataacagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCtt < 1:10466‑M1/113‑1 (MQ=255) aacagatgtctggaaatataggggcaaatccaATTAGCCCAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTg < 1:228184‑M1/117‑1 (MQ=255) acagatgtctggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGtgc > 1:805380‑M1/32‑148 (MQ=255) cAATAAACCTAACCAGCGATTGACAGGATTAGtagactgaccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaa > 1:467803‑M1/1‑32 (MQ=255) gaaacCTAACCAGCGATTGACAGGATTAGtagactggccccctgaatctccagacacccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggacggagaaacg < 2:485466‑M1/148‑121 (MQ=255) ttggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATa > 2:261799‑M1/24‑149 (MQ=255) tggaaatataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAgattc < 2:780808‑M1/127‑3 (MQ=255) ggacatataggggccaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCAAAGACCGTTGGAAAAA‑CCATAGGGATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTagtgagtccggtacg < 2:81891‑M1/128‑8 (MQ=255) acatataggcgcaattccaATGAGCCACACCCAGCAGAGCAATAACCACCTCCACGACGCCAATACCGTTGTAAAAA‑CCATAGGTATTACTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGt > 2:27691‑M1/20‑149 (MQ=255) tacccagcGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg < 1:107023‑M1/146‑127 (MQ=255) aatataggggcaattccaATGAGCCAAAACCAGCAGTGCAATAATCACCTCCACGGCGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGtt > 2:459413‑M1/19‑149 (MQ=255) ataggggcaaatccaATTAGCCAAAACCAGCAGAGCAATCGTAACCGCTACTACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGTTtat > 1:787593‑M1/16‑149 (MQ=255) taggggcaaacccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGTTtata > 2:157175‑M1/15‑149 (MQ=255) gCGATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaggacaggtgcttgatgtcttggggccggaggaacgcagacggcgtag > 1:860606‑M1/1‑17 (MQ=255) ggcaaatccaGTGAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGTTTATAGTCt > 2:225168‑M1/11‑149 (MQ=255) ggcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGGAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTAGCCTTCGTGAGTCAGATACTGTTTATAGTCt < 1:639319‑M1/139‑1 (MQ=255) ggcaaacccaATTAGCCAAAACCAGCAGAGCAACACTCACCTCCACGACGCCAAGACAGTTGGAAAAAACCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGTTTATAGTc > 2:358676‑M1/11‑149 (MQ=255) gATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcactggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacca < 2:510934‑M1/149‑135 (MQ=255) gATTGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgataggcttaatactaggttttagactagtcattggagaacagatgattgatgtcgtagggccggagaaacgcaaacggcgtacca > 2:268527‑M1/1‑15 (MQ=255) gcaaatccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGTTTATAGTCtt < 2:775851‑M1/140‑1 (MQ=255) ttGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagcctagtcattggagaacacatgattgaggtcttagggccggagaaaggcagacggcgtacgcca > 1:33890‑M1/1‑13 (MQ=255) ttGACAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccaca < 1:107359‑M1/149‑137 (MQ=255) aactccaAATAGCCAAACCCCGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTCTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGTTTATAGTCTTcc > 2:719188‑M1/8‑149 (MQ=255) atccaATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGTTTATAGTCTTCCgg < 2:758671‑M1/144‑1 (MQ=255) aCAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacag > 1:135628‑M1/1‑10 (MQ=255) aCAGGATTAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgactgatgtcttagggccggaggaacgcagacggcgtaccacacag > 2:491783‑M1/1‑10 (MQ=255) | CAGCACCGGATAAATAAGGGAAACCATGATGAGCGTCACCCAATGCGGGTACCCATGCCTCCGGGGTGGTGATTAAAAATGAGAGTGTTACCAGCGGCGTGGTAAATGCCATCAGTCCTCCCAATAAACCTAACCAGCGATTGACAGGATTAGCCAAAACCAGCAGAGCAATAATCACCTCCACGACGCCAAGACCGTTGGAAAAA‑CCATAGGTATTATTGGCCGTTTGCCATGCCCTTGCTTCTGGTTTGTATTCGCCTTCGTGAGTCAGATACTGTTTATAGTCTTCCGG > CP009273/313562‑313853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |