mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4104735 | 171 (1.160) | 3 (0.020) | 3/456 | NT | 1.8% | coding (241/1374 nt) | cpxA | sensory histidine kinase in two‑component regulatory system with CpxR |
| ? | NC_000913 | 4104739 = | 164 (1.130) | coding (237/1374 nt) | cpxA | sensory histidine kinase in two‑component regulatory system with CpxR | |||||
| * | ? | NC_000913 | 3736656 = | 275 (1.870) | 3 (0.020) | 3/440 | NT | 1.1% | coding (522/825 nt) | bax | putative glucosaminidase |
| ? | NC_000913 | = 3736652 | 268 (1.910) | coding (526/825 nt) | bax | putative glucosaminidase | |||||
| * | ? | NC_000913 | = 3714533 | 187 (1.270) | 3 (0.020) | 3/454 | NT | 1.6% | coding (1862/2334 nt) | bisC | biotin sulfoxide reductase |
| ? | NC_000913 | 3714546 = | 188 (1.300) | coding (1849/2334 nt) | bisC | biotin sulfoxide reductase | |||||
| * | ? | NC_000913 | = 2901172 | 178 (1.210) | 3 (0.020) | 3/458 | NT | 1.7% | coding (581/1278 nt) | yqcE | putative MFS transporter, inner membrane protein |
| ? | NC_000913 | 2901176 = | 178 (1.220) | coding (585/1278 nt) | yqcE | putative MFS transporter, inner membrane protein | |||||
| * | ? | NC_000913 | 2852106 = | 129 (0.880) | 3 (0.020) | 3/444 | NT | 2.3% | coding (243/273 nt) | hypC | hydrogenase maturation protein |
| ? | NC_000913 | 2852166 = | 132 (0.930) | coding (31/1122 nt) | hypD | hydrogenase maturation protein | |||||
| * | ? | NC_000913 | = 1202572 | 114 (0.780) | 3 (0.020) | 3/458 | NT | 2.5% | coding (362/675 nt) | cohE | e14 prophage; repressor protein phage e14 |
| ? | NC_000913 | = 1202633 | 122 (0.830) | coding (301/675 nt) | cohE | e14 prophage; repressor protein phage e14 | |||||
| * | ? | NC_000913 | = 832060 | 110 (0.750) | 3 (0.020) | 3/446 | NT | 3.1% | coding (1189/1365 nt) | rhlE | ATP‑dependent RNA helicase |
| ? | NC_000913 | = 832200 | 80 (0.560) | coding (1329/1365 nt) | rhlE | ATP‑dependent RNA helicase | |||||
| * | ? | NC_000913 | 723100 = | 107 (0.730) | 3 (0.020) | 3/440 | NT | 2.9% | coding (1315/2685 nt) | kdpD | fused sensory histidine kinase in two‑component regulatory system with KdpE: signal sensing protein |
| ? | NC_000913 | = 723096 | 100 (0.710) | coding (1319/2685 nt) | kdpD | fused sensory histidine kinase in two‑component regulatory system with KdpE: signal sensing protein | |||||