Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 2 3
2 2 3
3 3 4
3 7 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 16 43
Multiple Base Substitutions 0 0
Deletions 11 70
Insertions 3 21
Mobile Element Insertions 6 30
Amplifications 10 10
Gene Conversions 0 0
Inversions 0 0
Total 46 174

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F28 I1 R1 16 0 34.7 1359410 92.7% 1260173 128.8
A1 F64 I0 R1 91 0 88.6 3166532 97.8% 3096868 142.4
A1 F64 I1 R1 14 0 171.6 6011574 97.4% 5855273 137.3
A2 F12 I1 R1 16 0 37.1 1473030 96.0% 1414108 122.5
A2 F71 I0 R1 132 0 88.2 3071856 97.3% 2988915 140.8
A2 F71 I1 R1 17 0 96.4 3441492 97.1% 3341688 135.5
A3 F12 I1 R1 15 0 28.4 1141862 92.9% 1060789 130.8
A3 F31 I1 R1 15 0 39.2 1468162 95.9% 1407967 130.5
A3 F70 I0 R1 119 0 82.4 3195270 97.9% 3128169 136.2
A3 F70 I1 R1 16 0 89.9 3216594 97.4% 3132962 134.5

Mutation Needle Plot

Mutation Targets

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