Baym_M_2016: Manifold0-100gml-1mgml - Sample Meta Data
Stats |
Metadata |
Mutations |
Converged Mutations |
Fixed Mutations |
Filter
Note: the reference genome BOP27 is a known variant of E. coli K12 MG1655 E. coli K12 MG1655.
| ALE, Flask, Isolate, Technical Replicate | Clonal or Population | ALE Sample Details | Base Media | Carbon Source(g/L) | Nitrogen Source(g/L) | Phosphorus Source(g/L) | Sulfur Source(g/L) | Calcium Source(g/L) | Supplement(g/L) | Temperature (Celsius) | Strain | Additional Strain Details | Taxonomy ID | Reference Genome |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A0 F0 I1 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I2 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I3 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I5 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F1 I6 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | ||
| A1 F2 I10 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I11 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I12 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I13 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I14 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I15 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I16 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I17 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I18 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I19 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I20 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I21 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I22 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I23 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I24 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I25 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I26 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I27 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I28 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I29 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I30 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I31 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I32 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I33 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I34 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I35 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I36 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I37 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I38 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I39 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I40 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I41 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I42 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I43 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I44 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I45 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I46 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I47 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I48 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I49 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I50 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I51 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I52 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I53 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I54 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I55 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I56 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I57 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I58 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb | |
| A1 F2 I59 R1 | clonal | The base agar was composed of 2% w/v BD Bacto Agar (214030), and one LB-Lennox capsule (RPI #L24065) per liter. | LB | None | None | None | None | ,trimethoprim(100) | 28 | 679895 | E. coli K-12 BW25113 KO variant (38) | Illumina/ | /var/data/Ecoli_K12_BW25113.gb |