Note: the reference genome BOP27 is a known variant of E. coli K12 MG1655 E. coli K12 MG1655.
ALE, Flask, Isolate, Technical Replicate | Clonal or Population | ALE Sample Details | Base Media | Carbon Source(g/L) | Nitrogen Source(g/L) | Phosphorus Source(g/L) | Sulfur Source(g/L) | Calcium Source(g/L) | Supplement(g/L) | Temperature (Celsius) | Strain | Additional Strain Details | Taxonomy ID | Reference Genome |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A0 F0 I1 R1 | clonal | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A1 F2 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A1 F15 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A1 F37 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A2 F2 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A2 F14 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A2 F38 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A3 F2 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A3 F14 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A3 F38 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A4 F2 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A4 F14 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A4 F38 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A5 F2 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A5 F14 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] | ||||
A5 F38 I0 R1 | population | BM_ALE | (NH4)2SO4(7.6) | KH2PO4(15.7) | MgSO4(0.5) | None | 37 | 316435 | Nissle_1917 | ['/var/data/NZ_MW240712.gbk', ['/var/data/NZ_CP058219.gbk', ['/var/data/NZ_CP022686.gbk', '/var/data/pMUT1-hok-empty_control.gbk']]] |