New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =896 (0.480)568 (0.350) 135/218 11.9 43.8% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 676 (0.420)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1421 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTAAAAGAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380
                                                                                                                                 |                                                                                                                                
atatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCtttt                                                                                                                                  >  2:866652/1‑128 (MQ=255)
 tatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCttttt                                                                                                                                 >  2:3541161/1‑128 (MQ=255)
      aGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATATCtttatttttt                                                                                                                            >  1:2315434/1‑128 (MQ=255)
       gTTTCATTTATTTATCGCACTTGTATGAATTATTAAGAAACTAAAAATATTATCTTTTTATATATTTTTTGTATATTCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCttttttttttt                                                                                                                           <  1:3241772/128‑1 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAGCTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCtttttttttttttt                                                                                                                        >  2:372310/1‑128 (MQ=255)
             ttAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCttttttttttttttttt                                                                                                                     >  1:2822928/1‑128 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTT‑AACTTGTAAAAAATAGCtttttttttttttttttaaaa                                                                                                                 >  2:3137109/1‑124 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataa                                                                                                                 >  1:1889743/1‑127 (MQ=255)
                    tttttaattGTATTAAATATTAAGTAAATAAAAATTTTATATTTTTATATATTTTTTGTTTAAGCAAA‑TTTTTAAAAAATTAATTTT‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataatgg                                                                                                              <  2:627590/121‑5 (MQ=255)
                    atagCACTTTAATTAATTATTAAGAAACAAAAACTATTTTCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATATCTTTTTTTTTTTTTTTTtataatgg                                                                                                              <  1:1991286/125‑5 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCttttttttttttttttataatttaaa                                                                                                            >  1:468546/1‑118 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATgta                                                                                                           >  1:2643938/1‑126 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAATAAATAGCTTTTTTTTTTTTTTTTTTtaattaaaatat                                                                                                        >  2:2637188/1‑118 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATaa                                                                                                    >  2:2721561/1‑128 (MQ=255)
                              ttttaaTTATTAAGAAAAAAAAAATATTATCTTTTTATATAATTTTTTTATATGCAAA‑TTTTTAAAAAATTAATTTT‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAAt                                                                                                  <  2:3055160/124‑1 (MQ=255)
                               tttaaatattaataaAATAAAAATTTTATATTTTTATATATTTTTTTTATATTCAAA‑ATTTTAAAAAATAAATTTG‑AACTTTTAAAAAAAAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                 <  2:1320332/119‑1 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATTTAAATATAAAtt                                                                                                 >  2:937588/1‑128 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTATA‑AAT‑AAAATATAAAtt                                                                                                 >  2:3877252/1‑128 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATTTAAATATAAAt                                                                                                  >  1:3536129/1‑128 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATTTAAATATAAAtttt                                                                                               >  2:2517112/1‑128 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTAgtt                                                                                           >  2:2979229/1‑126 (MQ=255)
                                         gaGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAG‑‑ATTTTTTTTTTTTTTTTTATAATTTAAATTTAAATTTTatttattt                                                                                       >  2:3636885/2‑128 (MQ=255)
                                         attaaattaaaattaTT‑TATTTTTATATATTTTTTTTTTTTTTAAA‑TTTTTTAAAAATTAATTTT‑TAATTGTAAAAAATA‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAttt                                                                                       <  2:1036099/125‑1 (MQ=255)
                                            aaaataaaaattTTTTATTTTTTTATTTTTTTTTTTTATTTAAA‑TTTTTAAAAAATTTATTTT‑AAATTTTATAAAAT‑TTATTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTttg                                                                                     <  1:654049/128‑1 (MQ=255)
                                             taataaaaataTTATTTTTTTTTTATTTTTTTTTATATTTAAATTTTTAAAAAAATAAATTTT‑AA‑TTTTATAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTttgtt                                                                                   <  1:693005/125‑1 (MQ=255)
                                             aacttaaaataTTATCTTTTTATATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTT‑AACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTtgttgt                                                                                 <  2:464978/128‑1 (MQ=255)
                                               cttaaactaTTATCTTTTTTGATATTTTTTGTATTTGCAAA‑TTTTTAAAAAAATAATTTG‑TAATTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTc                                                                                <  1:2715188/125‑1 (MQ=255)
                                               ataaaaattTTATATTTTTTTATTTTTTTTTTATATTAAAA‑TTTTTAAAAAATTAATTTT‑TAATTTTAAAAAATATCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTttgtt                                                                                   <  2:1854155/127‑1 (MQ=255)
                                                taaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATGTATttttttt                                                                                  >  1:3446512/1‑127 (MQ=255)
                                                taaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTAGTTATtttttttta                                                                                >  2:1567271/1‑125 (MQ=255)
                                                 aaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAA‑AAAAAATTTAAGTATtttttttttat                                                                              >  1:3797339/1‑123 (MQ=255)
                                                 aaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAAAGTAAATATAAATTTAATTAATTTTTTTTTCTa                                                                              >  1:411046/1‑128 (MQ=255)
                                                   atttattatTTTTTTTTTTTTTTTTTTTATTTTAAAA‑TTTTTAAAAAATAAATTTT‑AACTTTTAAAAAATAG‑‑ATTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTaa                                                                             <  1:3670421/125‑1 (MQ=255)
                                                    aatttttttttttttTATTTTTTTTTTATATTAAAA‑TTTTTTAAAAAATTATTTT‑AACTTTTTAAAAAATG‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAg                                                                            <  2:3401156/119‑1 (MQ=255)
                                                     atattttTTTTTTATTTATTTTTTGTATATTTAAA‑TTTTTAAAAAATTTATTTT‑TAATTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTAt                                                                         <  2:2244040/127‑1 (MQ=255)
                                                      tattatCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATTTTTTTTTATAATTAt                                                                         >  1:3392132/1‑128 (MQ=255)
                                                       attatCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTAGTATTTTTTTTTTCTaataat                                                                         >  1:3176050/1‑124 (MQ=255)
                                                        ttatCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTTTTTTATAATTAtat                                                                       >  1:1433037/1‑126 (MQ=255)
                                                        ttatCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTAAAATGTAAATATAAATTTTAGTTATTTTGTTGTATATTTATCt                                                                       >  2:3935287/1‑128 (MQ=255)
                                                         tatCTTTTTTTTTATTTTTTTTATATTATAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCt                                                                       <  1:1145793/128‑1 (MQ=255)
                                                          atCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATGTATTTTTTTTTATAATtatata                                                                      >  1:239317/1‑128 (MQ=255)
                                                              ttttATATATTTTTTTTATATTTAAA‑TTTTTAAAAAATTAATTTT‑AAATTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaaa                                                                 <  1:534971/128‑1 (MQ=255)
                                                                 tAGTTATTTTTTGTATATTGAAA‑TTTTTAAAAAATTTAATTT‑AAATTGTAAAAAAATGC‑‑CTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAAt                                                               <  1:2577967/128‑1 (MQ=255)
                                                                 tAGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATTTATTTTTTTTTATAATTATAaaaaaaaaaa                                                              >  2:1412508/1‑126 (MQ=255)
                                                                  aGATATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAG‑‑ATTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAATTATTTTTTTTTATAATTATAAAAAAAAATa                                                              >  1:1584614/1‑128 (MQ=255)
                                                                   ttttttttttttttATTTAAA‑TTTTTTAAAAATTTATTTT‑TAATTTTAAAAAAT‑‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                             <  2:2883035/124‑1 (MQ=255)
                                                                   ttttttttttttttATTTAAA‑TTTTTTAAAAATATATTTGTAATTTTTAAAAAAAGTGTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaaaa                                                                <  1:3602761/124‑1 (MQ=255)
                                                                     gtatttagatataTTCAAA‑TTTTTAAAAAATTAATTTT‑TAATTTTTAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGaa                                                           <  1:3850715/119‑1 (MQ=255)
                                                                       ttttttttATATTTAAA‑TTTTTAAAAAATTAATTTT‑AAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAAGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAg                                                         <  2:408238/128‑1 (MQ=255)
                                                                        tttttGTTTATTCAAA‑TTTTTAAAAAATTAATTTT‑AACTTTTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAg                                                         <  1:2051440/128‑1 (MQ=255)
                                                                        tttttGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATGTAAATAAAAATTTTAGTATTTTTTTTTTAAAAGTAAATAAAAAAATATaaat                                                         >  1:2116296/1‑127 (MQ=255)
                                                                        tttttGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTATTTTTTTTTCTAATTATATAAAAAAATATaatgt                                                        >  1:945293/1‑125 (MQ=255)
                                                                        tttttGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTATGTATTTTTTTGTATAAGTATATAAAAAAATAaaaatta                                                       >  1:1283845/1‑125 (MQ=255)
                                                                         ttttttttattaaaa‑TTTTTTAAAAATTAATTTT‑AAATTTTATAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGa                                                       <  1:1009766/116‑1 (MQ=255)
                                                                            tgtttttGCAAA‑TTTTTAAAAAATTTATTTT‑TAATTTTTAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaa‑a                                                    <  2:3203045/122‑1 (MQ=255)
                                                                            tGTATATGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATGTATTTTGTTTTATAATTTTATAAAAAAATATAAATTaa‑aaa                                                  >  1:1517476/1‑128 (MQ=255)
                                                                             ttttatTCAAA‑TTTTTAAAAAATTAATTTT‑TAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaa‑aaa                                                  <  2:1266101/125‑1 (MQ=255)
                                                                               ttttgtaaa‑TTTTTAAAAATTTTATTTG‑AAATTTTAAAAAAT‑‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAat                                                <  1:839056/122‑1 (MQ=255)
                                                                               atatGTAAA‑TTTTTAAAAATTTTATTTT‑TAATTTTTAAAAAT‑‑TTGTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAat                                                <  1:750438/128‑1 (MQ=255)
                                                                               atatGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTATGTATTTTTTTTTATAAGTATATAAAAAAATAAAAAGTAA‑AAAat                                                >  2:3343672/1‑128 (MQ=255)
                                                                                  tttaaa‑TTTTTTAAAAATTTATTTG‑AATATTTATAAAATA‑‑TGTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGTATAAGTATCTAAAAAAATAGAAAGGAA‑AAAATAtt                                             <  2:54950/125‑1 (MQ=255)
                                                                                  tGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTA‑AATTTAAATAAAAATTTTTTTTATTTTTTTTTATAATTTTAAAAAAAAAATAAAACGaa‑aaaaatttt                                            >  2:1999878/1‑123 (MQ=255)
                                                                                  tGCAAA‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTTTTGTATAAGTATATAAAAAAATATAAATTAA‑AAAATAtttt                                           >  1:247676/1‑126 (MQ=255)
                                                                                    taaa‑TTTTTTAAAAATTTATTTT‑TAATTTTAATAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGt                                           <  2:730049/127‑1 (MQ=255)
                                                                                       a‑TTTTTAAAAAATTAATTTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGGTTTTTTTTTGTGTAATTTTATAAAAAAATATAAAGTAA‑AAAATATTTTTa                                         >  1:892228/1‑128 (MQ=255)
                                                                                         ttttAAAA‑AATTAATTTG‑TAATTGTAAAAAATTGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTaaaa                                      <  1:3066997/128‑1 (MQ=255)
                                                                                          tttAAAAAAATTAATTT‑‑AACATTTAAAAAA‑A‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGt                                    <  1:3207880/128‑1 (MQ=255)
                                                                                            ttaaaaaaTTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATTATGGAAATATTAATTTTAGGTATTTTTTTTTATAATTATAAAAAAAAATATAAAAGAA‑AAAATATTTTTAAAAATa                                   >  1:2256513/3‑128 (MQ=255)
                                                                                             ttaataatttattTT‑ATATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTa                                   <  1:372310/123‑1 (MQ=255)
                                                                                             taaaaaaTTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTATTTTTTTGTCTAAGTATATAAAAAAATAGAAAGTAA‑AAAATATTTTAAAAATTaa                                  >  2:3270438/2‑128 (MQ=255)
                                                                                             taaaaaaTTAATTTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTAAAATGTAATTATAAATTTTAGGTATTTTTTTGTATAATATTATAAAAAAATAAAAAGAAA‑AAAATATTTTAAAAATTaa                                  >  2:1630764/2‑128 (MQ=255)
                                                                                               aaaaattaaatTT‑AAATTGTAAAAAATAG‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTaa                                  <  1:3315396/125‑1 (MQ=255)
                                                                                                 aaattaattTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTT‑‑‑TAATTGAAATATAAATTTTAGTTATTTTTTTTTCTAATTATTTAAAAAAATTGAAATTAT‑AAAATATTTTTAAATTTAATACt                              >  1:2980133/2‑128 (MQ=255)
                                                                                                 aaattaattTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAATTTTTAGGTATTTTGTTGTGTATTTTTATAAAAAAATTAAAAGTAA‑AAAATATTGTTAAATTTAATa                                >  1:3475049/2‑128 (MQ=255)
                                                                                                 aaattaattTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATATTGGAAATATAAATTTTAGGTATTTTTTTTAGTAATTAACTAAAAAAATATAAAGTAA‑AAAATATTGTTAAAAGTAATAc                               >  1:3126603/2‑128 (MQ=255)
                                                                                                  aattaattTG‑AACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTA‑AATGTAAATATAATTTTTTGTTTTTTTTTTTTATATTTATATAAAAAAATAGAAATAAA‑AAAATTTTTTTAATATTaaaata                              >  1:1351620/1‑124 (MQ=255)
                                                                                                   attaattTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATATTGTAAATATAAATTTTATTTATTTTTTTTTATAATTATAAAAAAAAATATAAAGTAA‑AAAATATTTTAAAAATTaaaaa                               >  2:1910176/1‑125 (MQ=255)
                                                                                                   attaattTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATAAAAATTTTAGTTTTTTTTTTTTATAATTAAAAAAAAAAATAAAAATTAA‑AAAATATTTTTAAATTTAATaaaa                             >  2:1188519/1‑125 (MQ=255)
                                                                                                   attaattTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGAAAAAATAAATTTTAGTTTTTTTGTTTTATAAGTATAAAAAAAAATAAAAAGTAA‑AAAATATTTTTAAAATTAATaaaa                             >  2:3469524/1‑125 (MQ=255)
                                                                                                   attaattTG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATATTGTAAATTAAAATTTTTGGTATTTTGTTGTAAAATTATATTAAAAAAAATAAAGGAA‑AAAATATTTTTAAAATTAATaaaaa                            >  1:2174382/1‑124 (MQ=255)
                                                                                                    ttaattTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAAAATAATATTTAGTTATTTTTTTTAATAAGTATATAAAAAAATATAAATTAA‑AAAAAAATTATAAAATAAAtaataa                            >  2:1476990/1‑128 (MQ=255)
                                                                                                       attTG‑AACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATGTATTTTTTTGTCTAATTATATAAAAAAATATAAATTAA‑AAAATTTTTTTAAAATTAATAATAAAat                         >  1:3988972/1‑128 (MQ=255)
                                                                                                         ttG‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTTTTTTTTTTTAAAAGTATATAAAAAAATAAAAAGGAA‑AAAATATTTTAAAAATTAATAAAAAAtttat                      >  2:2808117/1‑128 (MQ=255)
                                                                                                          tttaaCTTGTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTAATACTAAAatta                       <  2:2084667/125‑1 (MQ=255)
                                                                                                           g‑AACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAATTATAAATTTTAGGTATTTTTTTTTATATTTATATAAATAAATATAAATCAA‑AAAATTTTTTTAAAATTAAATCTAAAATTAttt                    >  1:1045500/1‑128 (MQ=255)
                                                                                                               cTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCAAAAAAAATATAAAGAAA‑AAAATATTGTTAAAATTAAAAAAAAAATTATTAAAt                 >  1:1729418/1‑128 (MQ=255)
                                                                                                                   tAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTTTTTTCTAATTATATAAAAAAATATAAAGGAA‑AAAATATTTTTAAAATTAATACTAAAATTATTTAATGtt              >  1:1817466/1‑128 (MQ=255)
                                                                                                                    ttttaaattttttttttttttttttttttATAATGTAAATATAAATTTTAGGTATTTTTTTGTCTAAGTATATAAAAATATAGAAAGGAA‑AAAATATTGTTAAAAGTAATACTAAAATTATTTAATGt               <  1:2884551/118‑1 (MQ=255)
                                                                                                                     taattattttttttttttttttttttttATAATTTAAATATAAATTTTATGTATTTTGTTGTATAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTAATACTAAAATTATTTAATGtt              <  2:81035/119‑1 (MQ=255)
                                                                                                                         aattttttttttttttttttttttATAATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatt          <  2:2308588/123‑1 (MQ=255)
                                                                                                                          aaatatattttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:2152801/121‑1 (MQ=255)
                                                                                                                           tagcttttttttttttttttttAAAATTTAAATAAAAATTTTATGTATTTTTTTGTAAAAGTATAAAAAAAAATAAAAAATAA‑AAAATATTGTTAAAA‑TAAAAAAAAAAATTTTTAATTTtaaataaa       >  2:2408725/5‑128 (MQ=255)
                                                                                                                           atagctttttttttttttttttATAATGGAATTATAAATTTTAGTTATTTTTTTGTATAAGTATCTAAAAAAATAGAAAGGAA‑AAATTATTTTTAAAATTAATAATAAAATTATTTAATTttaattaa        >  1:1397430/6‑128 (MQ=255)
                                                                                                                           atagctttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTATAAGTATATAAAAAAATATAAATGAA‑AAAATTTTTTTAAAATTAATAATAAAATTTTTTAATTttaattaa        >  1:3922342/6‑128 (MQ=255)
                                                                                                                           atagctttttttttttttttttAAAATGTAAATA‑AAAATTTATGTAATTTTTTTTAAAAATTATAAAAAAAATAAAAATGAATAAAATATTTTTAAATAAAATAATAAAATAATTAATTTttaataaa        >  2:379187/6‑128 (MQ=255)
                                                                                                                              gctttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTTTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAAc     >  1:599374/3‑128 (MQ=255)
                                                                                                                               ctttttttttttttttttAAAATGTAAAAAAAAATTTTAGTTATTTTTTTTTATAATTATAAAAAAAAATAAAAAGTAA‑AAAAATTTTTTAAAATTAATAATAAAATAATTTAATTTTAATTaaaaat    >  2:1108880/2‑126 (MQ=255)
                                                                                                                                 ttttttttttttttttATAATGTAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATATAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTta  <  1:1217694/128‑1 (MQ=255)
                                                                                                                                 ttttttttttttttttATAATGGAAATATAAATTTTATGTATTTTGTTGTATTAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTta  <  2:1757142/128‑1 (MQ=255)
                                                                                                                                 ttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTta  <  1:1636936/128‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                
ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAA‑TTTTAAAAGAATTAATTTG‑AACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAA‑AAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.