New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311153 =359 (0.140)1169 (0.550) 197/208 0.9 79.7% intergenic (‑76/‑238) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 298 (0.140)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21

Only 100 of 1841 total aligned reads displayed.

TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTAT‑‑ATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTA  >  CP016816/311021‑311275
                                                                                                                               |                                                                                                                                 
   acaatttttaataaATAATATAAATTAAATTAAAATTGTAATTAACTTTTTAATTTTAAACACCAATTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATAAATTCATtat                                                                                                                                <  2:3814197/120‑1 (MQ=255)
   aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtat                                                                                                                                <  1:745666‑M2/128‑4 (MQ=255)
     cAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTAATtatat                                                                                                                              <  2:172745‑M2/128‑6 (MQ=255)
         tGTAATATATAATACAAATTAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatat                                                                                                                          >  2:5237527‑M2/1‑119 (MQ=255)
         tGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatat                                                                                                                          <  1:435990‑M2/128‑10 (MQ=255)
          gTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatata                                                                                                                         >  2:5353907‑M2/1‑118 (MQ=255)
          gTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACAATCAATCATtatatatata                                                                                                                         <  1:2324776‑M2/128‑11 (MQ=255)
           taataaCTAATCCAAATTAAATTAAAATTTTAATTAAATTTTTAAATTTACACACCCATTATTAAAAAATAAAATACTTTTTACATAATATTCAAAACATATATAACATACATTCATatt‑‑atatatat                                                                                                                      <  1:940836/128‑1 (MQ=255)
           taataaCTAATACAAATTAACTTAAAATTGTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCATtatatatatat                                                                                                                        >  2:1418256‑M2/1‑117 (MQ=255)
            aataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatata                                                                                                                       <  2:5112795‑M2/128‑13 (MQ=255)
             ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatttatatatat                                                                                                                      <  2:3954260‑M2/128‑14 (MQ=255)
               aaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACAACCATTATTAAAAAATAAAATACTAGTTACATACTATTAAAAACATATATAACATACATTCATtatatatatatatat                                                                                                                    <  1:306028‑M2/128‑16 (MQ=255)
                aCTAATCCAAATTAACTTAAAATAGTAATTAACTATTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatata                                                                                                                   >  1:2064509‑M2/1‑112 (MQ=255)
                 cTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatataaaaatat                                                                                                                  <  1:2880104‑M2/128‑18 (MQ=255)
                   aaTCAAAATGAAATTAAAATTGTAATTAAATTTTTAATTTTAAACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatat                                                                                                                >  2:5440168‑M2/1‑109 (MQ=255)
                    aTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatata                                                                                                               >  1:1435523‑M2/1‑108 (MQ=255)
                    aTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatata                                                                                                               <  2:5541093‑M2/128‑21 (MQ=255)
                     tCCAAATGAACTTAAAATTGTATTTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatataatg                                                                                                              >  2:3607723‑M2/1‑107 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatataa                                                                                                              <  1:4126017‑M2/128‑22 (MQ=255)
                       cAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACTCACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataa                                                                                                            >  2:2283780‑M2/1‑105 (MQ=255)
                           tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgca                                                                                                        <  1:4273192‑M2/128‑28 (MQ=255)
                              acaaaaaaTTGTAATAAAAATTTTCATTTTACACACCCCTAATAAAAAAATAAAATACTTGATAAATACGATTCAAAACAAATATAACATACATACATTAT‑‑ATAAAAATATATATATATATaaaaaaa                                                                                                   >  1:2701019/5‑125 (MQ=255)
                                ttAAAATTTTAATTAACTTTTTAATTTTACACACACCTTATTAAAAAATAAAATAATTTTTACATAAGATTAAAAAAATATATAAAATATATTATTtat‑‑atatatatatatatatatataatgaatgt                                                                                                 <  2:4343275/128‑9 (MQ=25)
                                ttAAAATTGTAATTAACTTTTTCATTTTAAACACCCCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCATtatatatatatataaatatataataaaatata                                                                                                   <  1:3259953‑M2/128‑33 (MQ=255)
                                ataAAAATGTAAATAAATTTATAATATTACACTCCAATTATTAAAAAATAAAATACTTTTTACAAACGATTCAAAACAAATATAACATACATTCATtatatatatatatatatatataatgcaatatg                                                                                                   >  2:819544‑M2/2‑96 (MQ=255)
                                  aaaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTAAAAACATATATTACATACATTCATtatatatatatatatatttatattgcaatatgtt                                                                                                 <  2:2443399‑M2/128‑35 (MQ=255)
                                   aaaTTGTAATTAACTTTTTCATTTTTCACACCCATTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaa                                                                                                >  2:4841899‑M2/1‑93 (MQ=255)
                                   aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatacaatatttaa                                                                                                <  1:3119280‑M2/128‑36 (MQ=255)
                                   aaaTTGTAAATAACTTTTTCATTATACACAACCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaa                                                                                                >  1:1112582‑M2/1‑93 (MQ=255)
                                    aaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaa                                                                                               <  2:4238659‑M2/128‑37 (MQ=255)
                                          aaTTAACTTTATCATTTTACACACCCATTATTAAAAAATAAAATACTTTTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaa                                                                                         >  1:3835667‑M2/1‑86 (MQ=255)
                                              aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataattcaatatgtaaatgaaaatatg                                                                                     <  1:5124116‑M2/128‑47 (MQ=255)
                                                cTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTTTTACATACGATTCAAAACATATATAACATACATTCATaatatatatatatatatatataattcaatatttaaaagaaaatataat                                                                                   <  1:4467838‑M2/128‑49 (MQ=255)
                                                       aTTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatttaaatgaaaatattgtataatag                                                                            <  1:173798‑M2/128‑56 (MQ=255)
                                                          ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatataaattaaaatattttataatagaaa                                                                         <  1:3391098‑M2/128‑59 (MQ=255)
                                                          ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTAT‑‑ATATATATATATATATATA‑AAAAT‑AAATATATAAATTAAAATATTTTataatatc                                                                     >  1:654496/1‑126 (MQ=255)
                                                            acacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaacc                                                                       >  2:3087580‑M2/1‑68 (MQ=255)
                                                            acacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatagatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaacc                                                                       <  2:1048832‑M2/128‑61 (MQ=255)
                                                             cacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaattaaaatatggtataatagcaaccg                                                                      <  2:1273506‑M2/128‑62 (MQ=255)
                                                                aaaacTTATTAAAAAATAAAATAATTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑T‑‑ATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGt                                                               <  2:2595431/124‑1 (MQ=255)
                                                                 ccccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataattcaatatgtaaatgaaaatatggtataatagcaaccgttta                                                                  <  2:4427007‑M2/128‑66 (MQ=255)
                                                                  cccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgaaatatgtaaatgaaaatattgtataagagaaaccgtttat                                                                 <  1:5244600‑M2/128‑67 (MQ=255)
                                                                  cccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataaaaaaatatgtaaatgaaaatatgttataatagcaacagtatat                                                                 <  1:363889‑M2/128‑67 (MQ=255)
                                                                  cccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTAT‑‑ATATATATATATATATATATA‑AA‑GAAATATGTATAACAAAAAATAGTATAATAGaaaaaattt                                                             >  1:2969745/1‑122 (MQ=255)
                                                                    cTTATTAAAAAATAAAATAATTGTTAGATAATATTCAAAACATATATAAAATAAATTCAT‑‑T‑‑ATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                           <  2:646773/128‑1 (MQ=255)
                                                                     ttattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaa                                                              <  2:4917745‑M2/128‑70 (MQ=255)
                                                                       attaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataattcaatatttaaataaaaatatgttattatagcaacagtttataaagt                                                            <  2:907014‑M2/128‑72 (MQ=255)
                                                                       attaAAAAATAAAATACTTGTTACATACGATTAAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagt                                                            >  1:849274‑M2/1‑57 (MQ=255)
                                                                        ttaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaa                                                           >  2:3706478‑M2/1‑56 (MQ=255)
                                                                          aaaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaa                                                         >  1:25996‑M2/1‑54 (MQ=255)
                                                                          aaaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgaaatatgtaaatgaaaatattttataatagcaacagtttataatgtaaa                                                         <  2:2110516‑M2/128‑75 (MQ=255)
                                                                          aaaaaaTAAAATAATTGTTAAATAATATTAAAATAATATATATAATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaa                                                         >  2:1123826‑M2/1‑54 (MQ=255)
                                                                            aaaataaaatAATTGTTACATAAGATTCAAAAAATATATAACATACATTAATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaa                                                       >  2:4512220‑M2/1‑52 (MQ=255)
                                                                            aaaataaaatAATTGTTACATAAGATTAAAAACATATATAACATACATTAATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaa                                                       >  2:3443543‑M2/1‑52 (MQ=255)
                                                                             aaataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATTAT‑‑ATATATATATATATATATATAT‑AT‑ATATATTTAAATTAAAATATTTTATAATAGCAAACTTATAtaaaataaaa                                                  >  1:2781648/1‑128 (MQ=255)
                                                                              aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaa                                                     <  2:4732463‑M2/128‑79 (MQ=255)
                                                                               ataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaat                                                    <  1:3168050‑M2/128‑80 (MQ=255)
                                                                                tataataCTTGTTAAATAAGATTCAAAACATATATAAAATACAATCATaatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaata                                                   >  2:2197182‑M2/1‑48 (MQ=255)
                                                                                taaaataGTTTTTATATAAGATTAAAAAAATATATAACATACATTCATtttatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaata                                                   >  1:1313655‑M2/1‑48 (MQ=255)
                                                                                  aaataATTTTTATATAAGATTATAAAAATATATAAAATATATTCA‑‑AT‑‑ATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATa                                             <  1:5343054/128‑1 (MQ=255)
                                                                                   aataCTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataattcaatatgtaaataaaaatatgttataatagaaaacttttataaattaaataattatta                                                <  1:2141038‑M2/128‑84 (MQ=255)
                                                                                    ataCTTGTTAAATAAGATTCAAAAAATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaa                                               >  1:4832794‑M2/1‑44 (MQ=255)
                                                                                      aCTTTTTACATAAGATTCTAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaat                                             >  2:4983697‑M2/1‑42 (MQ=255)
                                                                                       cTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatattgtataatagcaacagtttataaagtaaaaaaatagtaaata                                            <  2:2664172‑M2/128‑88 (MQ=255)
                                                                                       cTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaata                                            <  1:1647513‑M2/128‑88 (MQ=255)
                                                                                        ttGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaattaaaatattgtataatagcaaccgtttataaagtaaaaaaaaagtaaatat                                           <  1:1239081‑M2/128‑89 (MQ=255)
                                                                                        ttGTTACATACGATTCAAAACATATATAACATACATTCATTAT‑‑ATATATATATATATATATATA‑AA‑GCAAAATATAAAAGAATATATGATATAATAGAAAAATATTATAAAATAAAAAAATAATAAat                                       >  2:4632775/1‑128 (MQ=255)
                                                                                        ttGTTACATAAGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatat                                           >  1:1856050‑M2/1‑40 (MQ=255)
                                                                                         tttaaaaacctattcaaaacaaaTATATAATAGATTCATtatatatatatatatataaataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatata                                          >  2:3495483‑M2/12‑39 (MQ=255)
                                                                                           ttACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatattttataatatcaaaaatatataaattaaaaaaatattaaatataat                                        <  2:1847168‑M2/128‑92 (MQ=255)
                                                                                           ttACATACGATTCAAAACATATATAACATACATTCAT‑‑T‑‑ATATATATATATATATATATATAATTAAATATGTAAATTAAAATATTTTATAATAGAAACATTTTATAAAATAAAaaaatataaaatatt                                    >  1:1009183/1‑127 (MQ=255)
                                                                                             aCATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagaaaccgtttataaattaaaaaaatagtaaatataataa                                      <  1:4002760‑M2/128‑94 (MQ=255)
                                                                                              cATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaattaaaatatggtataatagcaaaagtttatatagtaaaaaaatagtaaatatactact                                     <  2:4193115‑M2/128‑95 (MQ=255)
                                                                                              cATACGATTCAAAACATATATAACATACATTCAT‑‑T‑‑ATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtacta                                 <  1:1558464/128‑1 (MQ=255)
                                                                                               aTACGATTCAAAACATATATAACATACATTCATTAT‑‑ATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTATATAAAGTAAAAAAATATTAAATTtact                                  >  2:3280965/1‑128 (MQ=255)
                                                                                                taagATTCAAAAAATATATAACATACATTCAT‑‑T‑‑ATATATATATATATATATATATAATAAAATATTTAAATGAATATATGTTATAATAAAAACAGTTTATAAATTAAAAAAATATTAAATATactact                               >  2:3367943/4‑128 (MQ=255)
                                                                                                tACGATTCAAAACATATATAACATACATTCATtatatatatatatacatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactactta                                   >  1:2237035‑M2/1‑32 (MQ=255)
                                                                                                 aatattcAAAAAATATATAACATAAATTAATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttat                                  >  1:4719744‑M2/4‑31 (MQ=255)
                                                                                                   gATTCAAAACATATATAACATACATTCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgattataaagtaaaaaaatagtaaatatactacttatttac                                <  1:3739621‑M2/128‑100 (MQ=255)
                                                                                                   aataaataacatatatAATTTATATATATatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttattta                                >  2:1644185‑M2/8‑29 (MQ=255)
                                                                                                    ttacAAAAGAAATATAAAAATAATTAATTAT‑‑ATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCCACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTa                             <  2:4065717/125‑1 (MQ=37)
                                                                                                    aTTCAAAACATATATAACATACATTCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttact                               >  2:2023065‑M2/1‑28 (MQ=255)
                                                                                                       cAAAACATATATAACATACATTCATTATAAATATATATATATATATATATATAAAACAATATGAAAATGAAAATATGTTATAATAGCAACAGTTTATAAATTAAAAAAATATAAtatataaaaattat                            >  2:3174050/1‑120 (MQ=255)
                                                                                                        aaaaTATATATAATAAATTTTTTTtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaa                           >  2:2781648‑M2/1‑24 (MQ=255)
                                                                                                         aaaaATATATAACATAAATTCAT‑‑T‑‑ATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACta                      <  2:2983388/128‑1 (MQ=255)
                                                                                                         aaaCATATATAACATACATTCATtatatatatatatatatatataatgcaatatgtaaattaaaatatggtataatagcaaccgtttataaagtaaaaaaataataatatactacttatttactaata                          <  2:72034‑M2/128‑106 (MQ=255)
                                                                                                         aaaCATATATAACATACATTCATtatatatatatatatatatataatgaaatatgtaaatgaaaataagttataatagcaaccgtatataaagaaaaaaaatattaaataaactacataaataaaaaa                          <  1:2533507‑M2/128‑106 (MQ=255)
                                                                                                          aaCATATATAACATAAATTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaata                         >  1:2416786‑M2/1‑22 (MQ=255)
                                                                                                              tacataACATACATTCATTAT‑‑A‑‑‑A‑ATATATATATAAATATAATCAAATATATAAAATAAAATATTTTATAATAGCAAACGTATATAAAGTAAAAAAATATTAAATATAGTAATTATTTACTAATAAAAt               >  1:5012225/4‑128 (MQ=255)
                                                                                                               atataAAATATATTTATtttatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatc                    >  2:1934864‑M2/1‑17 (MQ=255)
                                                                                                                tataACAAACATTCATtatatatatatatatatataaagcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaatatagtaaataaactactaatatactaataaaatctat                   <  2:2532362‑M2/128‑113 (MQ=255)
                                                                                                                  taAAATATATTAATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatctat                 >  1:351‑M2/1‑14 (MQ=255)
                                                                                                                   aaCATACATTCATtatatatatatatatatatataatgcaatatgtatatgaaaatatggtataatagcaaccttttataaagtaaaaaaatagtaaatatacaacttatttactaataaattctatt                <  2:2357202‑M2/128‑116 (MQ=255)
                                                                                                                      atacatTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatattgtataatagaaaaagtttataaagtaaaaaaatattaaatatactacttatttactaataaattctattttt             <  1:5506072‑M2/128‑119 (MQ=255)
                                                                                                                      atacatTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatctattttt             <  1:494752‑M2/128‑119 (MQ=255)
                                                                                                                       tacatTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatttggtataatagcaaccgtttataaagtaaaaaaatagtatatatactacttatttactaatataatctattttta            <  2:1541450‑M2/128‑120 (MQ=255)
                                                                                                                       tacatTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatctattttta            <  1:1939515‑M2/128‑120 (MQ=255)
                                                                                                                       tacatTCATtatatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagaaaaaaaatagtaaatatactacttatttactaataatatctattttta            <  1:4594894‑M2/128‑120 (MQ=255)
                                                                                                                        acatTCATtatatatatatatatatataatgcaatatgtaaatgaaaatatggtataatagcaaccgtttataaagtaaaaaaatagtaaatatactacttatttactaataaaatctatttttattt           <  2:2885986‑M2/128‑121 (MQ=255)
                                                                                                                         cattcattatatatatatatatatatataatgcaatatgtaaatgaaaatattgtataatagcaaccgtttataaagtaaaaaaatagtaaatatactaattatttactaataaaatatttttttttt          <  2:1187807‑M2/128‑122 (MQ=255)
                                                                                                                               |                                                                                                                                 
TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTAT‑‑ATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTA  >  CP016816/311021‑311275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.