| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 437880 | 867 (0.360) | 597 (0.200) +ATAT |
102/186 | 31.6 | 34.2% | intergenic (‑184/+238) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | 437881 = | 1254 (0.400) | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 684 total aligned reads displayed.
GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |||||||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATATATATTTTAGTAAATGAAGCAAAGCAAAAACCTCAATATTACATATAGAGTTATTG‑‑‑‑A > 1:3313261/1‑128GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACATCAATATTACCTATAGATTTATTG‑‑‑‑A > 1:5897004/1‑128GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAATCCTCCATATTACCTATAGATTTAATG‑‑‑‑A > 1:3890154/1‑128GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑A > 2:3909397/1‑128GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑A > 1:185643/1‑128 AAACTTATTTTTGTATTTGTAATTTTCATTTTTAATAAATAATAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑AT < 1:4073598/128‑1 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑AT > 2:2464960/1‑128 AACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATA > 2:1760100/1‑128 ACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATAT < 2:5082427/128‑1 CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATA > 2:5821041/1‑128 CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATA‑TTTATGAAATTAAGGAAAGCCAAAACCTCCATATTTCCTATATATTTAATG‑‑‑‑TTATAT > 2:3610502/1‑128 TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAGCCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATA > 2:4963883/1‑128 TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAATAACCTCCATATTACATATAGAGTTAATG‑‑‑‑ATATATA > 1:363692/1‑128 aaTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTAAGTAAAATAAGCAATTCAAAAACCTCCATAATAACTATAGATTTAATT‑‑‑‑ATATATAT > 2:3483643/3‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATAGATACTG‑‑‑‑ATATATAT > 1:6700781/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATAT > 1:800062/1‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATA > 2:2909866/1‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATA > 1:5359589/1‑128 aactacaaaaaTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATAT > 1:527691/12‑128 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTTCCTATAGAGTTAATG‑‑‑‑ATATATAatt > 2:5213254/1‑125 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTAAAGAGTTAATG‑‑‑‑ATATATATAT > 2:1664991/1‑128 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATCAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAACCAAAACCATCAATATTACCTATAAAGTTAATA‑‑‑‑ATATAattat > 2:6622754/1‑123 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAACGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATAGATA > 2:5742042/1‑128 GTATTTGTAAGTTTCATTTTTAATAAATATTATAAATATAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATAT < 2:5292181/128‑1 TAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTAGAGAGTTAATG‑‑‑‑ATATATATATATAaa > 2:3994812/1‑126 AGTTGTTAGTTTCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATAT < 2:2553770/128‑1 ttttattTTTCATTTTTAATATATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAATT‑‑‑‑ATATATATATATATATAT < 2:1092569/121‑1 TTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATAT < 1:2802846/128‑1 TTGTAAGTTTAATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑‑‑ATATATATATATATATAT < 2:2080904/128‑1 ttttAGTTTAATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAATCAAAGAAAAAAACTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATA < 2:2758196/124‑1 TGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAATCAAAAACATCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATA > 2:3008639/1‑128 TGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATA < 1:6233906/128‑1 gttatTTTAATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAAGCAAATCAAAAACCTCCATATTACATATAGAGTTAATG‑‑‑‑ATATATATATATATATATAT < 2:5639568/123‑1 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATAT > 2:5946691/1‑128 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATAT < 1:5594692/128‑1 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATAT > 1:3487843/1‑128 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATAT > 1:3239215/1‑128 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATAT > 2:1601830/1‑128 AAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAATG‑‑‑‑ATATATATATATATATATATAT > 2:6762184/1‑128 AGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATA > 1:2536146/1‑128 AGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATA < 2:2679721/128‑1 AGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATA > 1:481906/1‑128 GTTTGATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATgc < 2:4809608/128‑3 GTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT > 2:2318878/1‑128 GTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATAT > 1:3770005/1‑110 TTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATA < 1:262093/128‑1 TTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATgcaag < 2:3199417/128‑6 TCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATA < 2:6518301/128‑1 atTTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATTATATCAAGAAAATAAAAAAACTCCATATAAACTATAGAGTTAATT‑‑‑‑ATATATATATATATATATATATATATAT < 1:852743/126‑1 CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAATCAAAGCAAAAACCTACATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATAT > 2:6338075/1‑128 ATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATAAAGCAAAGCAAAAACCTCCATATTACCTAGAGAGTTAATG‑‑‑‑ATATATATATATATATATATAAATAaaat > 1:65577/1‑124 TTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAACAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATAAATccac > 2:3116670/1‑124 TTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATAATTTAGGAAATGAAGCAAAGCAAAAACCTCCATAAAACATATAAATATAATG‑‑‑‑ATATATATATATATATATATATATAatatcga > 2:3723584/1‑121 TTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATgcaagcg < 2:1943093/128‑8 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATtaaata > 1:5085776/1‑122 TAATAAAAATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATgcaagcgatc < 2:3303636/128‑11 tatATATTAGAAATATAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATgcaagcg < 1:2406632/125‑8 TAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATgcaagcg < 1:2481533/128‑8 AATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGAT < 2:4093987/128‑1 AATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATAatctagctctca > 1:4986162/1‑116 AATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGAAAGat > 1:2192022/1‑126 ATATTAGAAATAAAAATAGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATTTATATATATAAATATATATATAaaaataata > 1:4351161/1‑119 TATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAATCCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATgctctcgatca > 1:2949459/1‑117 TATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCA > 1:5761139/1‑128 ATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGAAAGCGATC > 1:5183484/1‑128 TTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATAT‑T‑CAAGCGATCAGC > 1:6515029/1‑128 GAAATAAAAATTGTATTTTTAAAATAAAAATATTATTATATGAAGAAAACAAAAAAACTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑TATATATATATATATATATATATATATATATGCAAGCGATCAGCATA < 1:5991698/128‑1 AAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGAAAGCTATCAGAATAAAATtg > 2:1392128/1‑126 AAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAACCAAAGCAAAAAACTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGG < 1:1164027/128‑1 ATTTTTAATATAAATATATTATTAAATGAATCAAATCAAAAAACTACATATTAACTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTT < 1:2275383/128‑1 TAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCTCGCGCTCAGAATAAAATGGTTATATATAGATC > 1:1243809/1‑128 TAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCAAAAAATGGTGAAATTTAGATC > 2:4220470/1‑128 AAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATA < 1:1004968/89‑1 AAATAAAAATTTTAGTAAATGAATAAAATCAAAAACCTCCATATTACCTATAGAGATAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTG < 1:97945/128‑1 AAATATTTTAGGATATGAATAAAACCAAAAACCTTCATATTAAATATATAGTTATTG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTT < 2:470571/128‑1 TTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCT > 1:4202170/1‑128 TTTAGGAAATGAAGCAAAGCAAACACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCTCTCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGGTCTT > 2:5378636/1‑128 AAATTAATCAAATCAAAAACCTCCATATTAAATATAGAGTTATTG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTT < 2:1491083/128‑1 cttcagatctAAAAACTCTATATTAACTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT < 1:3966414/118‑1 GCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGGTGATATATAGATCTGAGTTGGTCTGAAATTTGTAGTTT > 1:4558735/1‑128 CAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGAATATAATAGTGATATATAGATCTGAGATTGTGTTAATATTGTATTT > 2:687068/1‑128 AAAGCAAAAAACTCAATATTAACTATAGAGTTAAT‑‑‑‑‑‑TATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTT < 2:6048008/128‑1 GCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATAT‑T‑CTAGCTATCAGAATAAAATGGTGATATTTATATCTGATTTGGTCTTATATTTTTAGTTTTTATT > 2:916513/1‑128 CAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATATATATGACAGCTATCAGCATAAAATTGTGAAATTTAGATCTGATTTGGTCTTATATTTGTAGTTT > 2:3966898/1‑128 tAAACCTCTATATTATCTATAGAGTTATTG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTAT < 1:2058218/127‑1 AAAACATCCATATTAAATATAGAGTTAAT‑‑‑‑‑‑TATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTAT < 2:1243809/128‑1 CCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTT > 1:1398090/1‑128 CTCCAAATTAGCTATAGAGATATT‑‑‑‑‑‑CATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTT < 2:2161559/128‑1 TCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATA‑A‑GCTAGCGATCAGCATAAAAGGGTGAAATTTAGAGCTGAGGTGGTCTTAAATTTGTAGTATTTAGTTATATTTTt > 2:6417060/1‑127 taaCTATAGAGTTAATT‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAG < 1:1766691/125‑1 acaTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTA < 1:6412274/125‑1 ACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGATTTTGTATTAAATTTTTAGTTTTTATTTATAGTTTATAAAGTTA > 1:4663159/1‑128 TAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGTTGAAATATAGATCTGAGTTTGTCTTAAATTTTTAGTTTTTATATATAGTTTATAAAGATAAAAAT > 2:4384238/1‑128 tatagagtTATTTATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAG < 2:5477808/120‑1 taaattTATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAG < 1:1519429/122‑1 gttaaATATATATATATATATATATATATATATATGCAAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAT < 1:3107933/123‑1 aatTATATATATATATATAAATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATT < 2:6132777/125‑1 tattTATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTT < 1:6162070/124‑1 tATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTT < 1:1645629/127‑1 atgATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTT < 1:6837172/125‑1 |||||||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |