Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP016816393,3360CT68.0% 1049.7 / inf 851A679A (GCG→GCA) JCVSYN2_01720MOLPALP family lipoprotein
Reads supporting (aligned to +/- strand):  ref base C (120/149);  new base T (263/310);  total (385/466)
Fisher's exact test for biased strand distribution p-value = 7.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 870 total aligned reads displayed.

CTAATTTAATAAAATCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCAAAAAACTTTTCACCAA  >  CP016816/393209‑393463
                                                                                                                               |                                                                                                                               
  aaTTTAATAAAATCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAAtgctgc                                                                                                                               <  2:33480/128‑1 (MQ=255)
    tttAATAAAATCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGctgctg                                                                                                                             >  1:292297/1‑128 (MQ=255)
      taaaataaTCAGATAGTTTTATAGTAAATACATTCTTAAGATTTATATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGt                                                                                                                           <  1:814657/122‑1 (MQ=255)
       aataaAATCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTa                                                                                                                          >  2:1891896/1‑128 (MQ=255)
          aaaaTCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTAttt                                                                                                                       >  2:257319/1‑128 (MQ=255)
           aaaTCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTg                                                                                                                      <  2:962199/128‑1 (MQ=255)
           aaaTCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTg                                                                                                                      >  2:186273/1‑128 (MQ=255)
           aaaTCAGATAGATTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTg                                                                                                                      <  2:1462905/128‑1 (MQ=255)
            aaTCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGa                                                                                                                     >  1:1548766/1‑128 (MQ=255)
            aaTCAGATAGTGTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGa                                                                                                                     <  1:1005722/128‑1 (MQ=255)
             aTCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGATATTTAATGCCGCTGGTATTTGaa                                                                                                                    >  1:376296/1‑128 (MQ=255)
             aTCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGaa                                                                                                                    <  1:831436/128‑1 (MQ=255)
              tCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAAt                                                                                                                   >  2:1960881/1‑128 (MQ=255)
                 gtcaGTATTATAGTTAATAATTTCTTAAGATGTAAATGAACATTATGTGGAAAAATTGTTCTTAAACTCATAGCGAGTTTTTTAAAGTAAGGTAGTATTAAATTTAATGCTGCTGGTATTTGAAtttt                                                                                                                <  1:1038086/125‑1 (MQ=255)
                   tAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAATGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTa                                                                                                              >  2:307217/1‑128 (MQ=255)
                      tttattaGTAAATAAATTCTTAAGAGTTAAATGAACAATAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTATAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAAtt                                                                                                           <  2:1250587/123‑1 (MQ=255)
                        ttATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTtc                                                                                                         <  2:119618/128‑1 (MQ=255)
                        ttATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTtc                                                                                                         <  2:1645709/128‑1 (MQ=255)
                         tataGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTtct                                                                                                        >  2:687512/1‑128 (MQ=255)
                           taGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTctct                                                                                                      <  2:1585290/128‑1 (MQ=255)
                             gTAACTAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTAc                                                                                                    <  2:509216/128‑1 (MQ=255)
                             gTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTAc                                                                                                    <  1:208179/128‑1 (MQ=255)
                                aataaatTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTctct                                                                                                      >  2:1230555/1‑123 (MQ=255)
                                aataaatTCTTAAGATATAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAg                                                                                                 <  2:384401/128‑1 (MQ=255)
                                 ataaatTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAgt                                                                                                >  1:1326049/1‑128 (MQ=255)
                                 ataaatTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCACAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAgt                                                                                                <  2:1166287/128‑1 (MQ=255)
                                    aatTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGtt                                                                                             >  2:217798/1‑128 (MQ=255)
                                      ttCTTAAGATTTAAATGAACATTAGGTGGAAAAATTCTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCt                                                                                           <  1:1873593/128‑1 (MQ=255)
                                       tCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATATCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCtt                                                                                          >  1:1453390/1‑128 (MQ=255)
                                        cTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTa                                                                                         <  1:148885/128‑1 (MQ=255)
                                        cTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTa                                                                                         <  2:1747469/128‑1 (MQ=255)
                                         ttAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTAt                                                                                        <  1:1891619/128‑1 (MQ=255)
                                          tAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATg                                                                                       <  2:155236/128‑1 (MQ=255)
                                          tAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATg                                                                                       >  1:540038/1‑128 (MQ=255)
                                          tAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATg                                                                                       >  2:773249/1‑128 (MQ=255)
                                          tAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATg                                                                                       <  2:1059014/128‑1 (MQ=255)
                                          tAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATg                                                                                       <  1:1738553/128‑1 (MQ=255)
                                              aTTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGaa                                                                                   >  1:741580/1‑128 (MQ=255)
                                               tttAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATgagatc                                                                                  >  2:608002/1‑126 (MQ=255)
                                                 tAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAAcat                                                                                >  1:1158181/1‑128 (MQ=255)
                                                  aaaTGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAAcatc                                                                               <  1:933391/128‑1 (MQ=255)
                                                   aaTGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTAtt                                                                                                                        >  1:1083133/1‑86 (MQ=255)
                                                   aaTGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAAcatca                                                                              >  2:408122/1‑128 (MQ=255)
                                                       aaCATTAGGTGGAAAAATTGTTCTTAAACTCATATCGATTTTTTTAAAGTAAGGTAGTAGGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGATATCATCATATg                                                                          >  2:1424142/1‑128 (MQ=255)
                                                        aCATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGa                                                                         <  1:1591847/128‑1 (MQ=255)
                                                           ttAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATaa                                                                      <  2:1854578/128‑1 (MQ=255)
                                                             aGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCTTTTCATAAAt                                                                    >  1:864931/1‑128 (MQ=255)
                                                                tGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTgg                                                                 >  2:1620527/1‑128 (MQ=255)
                                                                  gAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGTAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTggat                                                               >  1:666696/1‑126 (MQ=255)
                                                                  gAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATTCCGCTGGTATTAGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTTGCt                                                               >  2:636422/1‑128 (MQ=255)
                                                                   aaaaaTTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTAc                                                                                                    <  1:1226132/90‑1 (MQ=255)
                                                                   aaaaaTTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTa                                                              >  2:1154023/1‑128 (MQ=255)
                                                                    aaaaTTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTaa                                                             <  2:1725400/128‑1 (MQ=255)
                                                                     aaaTTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAAcatca                                                                              <  1:1658597/110‑1 (MQ=255)
                                                                     aaaTTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGGTCTTATGAGAACATCATTTGATAAATTGGCTAAc                                                            <  2:351814/128‑1 (MQ=255)
                                                                      aaTTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACg                                                           <  1:1207375/128‑1 (MQ=255)
                                                                       aTTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGt                                                          <  2:829062/128‑1 (MQ=255)
                                                                           ttCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGATTTTTAAATTTCTCTACAAGTGTTCTGATGAGAACATCATTTGATAAATTGGCTAACGTATCa                                                      >  1:1247736/1‑128 (MQ=255)
                                                                           ttCTTAAACTCATAGAGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCa                                                      <  1:1788616/128‑1 (MQ=255)
                                                                             cTTCAACTCATAGCGATTATTGTAAAGTAAGGAAGTATGAAATTTAATGCTGCTGTTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCaaa                                                    <  2:1773486/128‑1 (MQ=255)
                                                                             cTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCaaa                                                    >  2:901194/1‑128 (MQ=255)
                                                                             cTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCaaa                                                    <  2:726653/128‑1 (MQ=255)
                                                                             cTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATgag                                                                                     >  1:1280040/1‑95 (MQ=255)
                                                                              ttAACCTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCaaaa                                                   <  1:512046/128‑1 (MQ=255)
                                                                              ttAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATg                                                                                       >  2:1807029/1‑92 (MQ=255)
                                                                               tacacgcATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAg                                                  <  1:448144/122‑1 (MQ=255)
                                                                               tAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAg                                                  <  2:1518352/128‑1 (MQ=255)
                                                                                aaaCTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGt                                                 <  2:865889/128‑1 (MQ=255)
                                                                                 aaCTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGtt                                                >  1:1915496/1‑128 (MQ=255)
                                                                                  aCTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGttt                                               >  2:1293724/1‑128 (MQ=255)
                                                                                   cTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTTGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTg                                              <  1:581506/128‑1 (MQ=255)
                                                                                   cTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTg                                              >  1:1836894/1‑128 (MQ=255)
                                                                                    tCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGc                                             >  2:571519/1‑128 (MQ=255)
                                                                                       tAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGctct                                          >  2:1108886/1‑128 (MQ=255)
                                                                                            aTTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACttt                                     >  1:972404/1‑128 (MQ=255)
                                                                                              ttttttAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTAc                                   >  1:1368944/1‑128 (MQ=255)
                                                                                              ttttttAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTAc                                   >  1:1760895/1‑128 (MQ=255)
                                                                                              ttttttAAAGTAAGGTAGTATGAAATTTAATGCTGATGGTATTTGAATTTTTAATTTCTCTAAAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTAc                                   <  1:34313/128‑1 (MQ=255)
                                                                                              ttttttAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGt                                                 >  1:1715034/1‑114 (MQ=255)
                                                                                               tttttAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTAcc                                  >  2:1326462/1‑128 (MQ=255)
                                                                                               tttttAAAGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTAcc                                  >  2:1354193/1‑128 (MQ=255)
                                                                                                 tttATAGTTAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTGCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACcat                                <  2:545712/128‑1 (MQ=255)
                                                                                                      aGTAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATaa                           <  2:1008965/128‑1 (MQ=255)
                                                                                                        tAAGGTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCatatat                         >  1:1806176/1‑128 (MQ=255)
                                                                                                         aaGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAata                        >  1:1125733/1‑128 (MQ=255)
                                                                                                         aaGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAata                        <  1:1959583/128‑1 (MQ=255)
                                                                                                           ggTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAATTGATCTTATCAGAACATCATTTGATAAATAGGCTAACGAATCAAAAGTATTATCTAGTTTAACTTCAtatataaa                      >  1:909731/1‑126 (MQ=255)
                                                                                                           ggTAGTATGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAatata                      <  1:709049/128‑1 (MQ=255)
                                                                                                              agtaTGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTc                   <  1:239032/128‑1 (MQ=255)
                                                                                                                 aTGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCaaa                >  2:193914/1‑128 (MQ=255)
                                                                                                                 aTGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTATCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAAAGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCaaa                <  1:1428264/128‑1 (MQ=255)
                                                                                                                  tGAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACca                                 <  2:925857/110‑1 (MQ=255)
                                                                                                                   gAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCaaaaa              <  2:432448/128‑1 (MQ=255)
                                                                                                                   gAAATTTAATGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCaaaaa              >  2:66245/1‑128 (MQ=255)
                                                                                                                      aTTTATTGCTTCTGGTATTTGAATTTTTACTTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAAATGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCAAAAAACt           <  1:412874/128‑1 (MQ=255)
                                                                                                                       tttACTGCTGCTGGTATTTGAATTATTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCGAAAGTTTGCTCTACTTTACCATCATAAATATATTCAAAAAACtt          <  1:1623491/128‑1 (MQ=255)
                                                                                                                          aaTGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCAAAAAACTTTTc       <  2:1037116/128‑1 (MQ=255)
                                                                                                                          aaTGCTGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCAAAAAACTTTTc       <  1:61217/128‑1 (MQ=255)
                                                                                                                          aaTGCCGCTGGTATTTGTATTTTTAATTTCTCTACAAGTGTTCTTATGAGATCATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCAAATAACTTTTc       <  1:776351/128‑1 (MQ=255)
                                                                                                                          aaTGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCAAAAAACTTTTc       >  2:1687390/1‑128 (MQ=255)
                                                                                                                               |                                                                                                                               
CTAATTTAATAAAATCAGATAGTTTTATAGTAAATAAATTCTTAAGATTTAAATGAACATTAGGTGGAAAAATTGTTCTTAAACTCATAGCGATTTTTTTAAAGTAAGGTAGTATGAAATTTAATGCCGCTGGTATTTGAATTTTTAATTTCTCTACAAGTGTTCTTATGAGAACATCATTTGATAAATTGGCTAACGTATCAAAAGTTTGCTCTACTTTACCATCATAAATATATTCAAAAAACTTTTCACCAA  >  CP016816/393209‑393463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑